CX675251

Overview
NameCX675251
Unique NameCX675251
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length925
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX675251 vs. ExPASy Swiss-Prot
Match: M2K1_ORYSJ (Mitogen-activated protein kinase kinase 1 OS=Oryza sativa subsp. japonica GN=MEK1 PE=1 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 7.471e-22
Identity = 49/108 (45.37%), Postives = 65/108 (60.19%), Query Frame = -1
Query:  611 SYSYPADIWSIGLALFECGTGEFPYAASEGP-----VNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLKKDAEARPTADQLLSHPFITKYEHAKVDLAAFVRSVFDPM 919
            SY Y +DIWS+GL + EC  G FPY  SEG        L+  I++ P PS     FSPEFC+F+  C++KD   R +A +LL+HPFI K+E   +DL   V S+  PM
Sbjct:  244 SYDYKSDIWSLGLVILECAIGRFPYIPSEGEGWLSFYELLEAIVDQPPPSAPADQFSPEFCAFISSCIQKDPAERMSASELLNHPFIKKFEDKDLDLRILVESLEPPM 351          
BLAST of CX675251 vs. ExPASy Swiss-Prot
Match: M2K6_ARATH (Mitogen-activated protein kinase kinase 6 OS=Arabidopsis thaliana GN=MKK6 PE=1 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 4.843e-21
Identity = 48/113 (42.48%), Postives = 69/113 (61.06%), Query Frame = -1
Query:  599 SYSYPADIWSIGLALFECGTGEFPYAASEGPVN------LMLQILEDPSPSPSRQNFSPEFCSFVDDCLKKDAEARPTADQLLSHPFITKYEHAKVDLAAFVRSVFDPMQRMK 919
            +Y Y +DIWS+G+++ EC  G FPY  SE   N      L+  I+E+P P+     FSPEFCSFV  C++KD  AR ++  LLSHPFI K+E   +DL   V ++  P+  ++
Sbjct:  244 TYDYSSDIWSLGMSVLECAIGRFPYLESEDQQNPPSFYELLAAIVENPPPTAPSDQFSPEFCSFVSACIQKDPPARASSLDLLSHPFIKKFEDKDIDLGILVGTLEPPVNYLR 356          
BLAST of CX675251 vs. ExPASy Swiss-Prot
Match: M2K2_ARATH (Mitogen-activated protein kinase kinase 2 OS=Arabidopsis thaliana GN=MKK2 PE=1 SV=2)

HSP 1 Score: 94.7449 bits (234), Expect = 7.732e-19
Identity = 43/120 (35.83%), Postives = 70/120 (58.33%), Query Frame = -1
Query:  575 YSYPADIWSIGLALFECGTGEFPYAASE------GPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLKKDAEARPTADQLLSHPFITKYEHAKVDLAAFVRSVFDPMQRMKDLADMLAI 916
            Y   +DIWS+GL + EC TG+FPYA             LM  I++ P P+    NFSPE  SF+  CL+KD  +R +A +L+ HPF+ KY+++ ++LA++      P+  + +L+   ++
Sbjct:  244 YGNKSDIWSLGLVVLECATGKFPYAPPNQEETWTSVFELMEAIVDQPPPALPSGNFSPELSSFISTCLQKDPNSRSSAKELMEHPFLNKYDYSGINLASYFTDAGSPLATLGNLSGTFSV 363          
BLAST of CX675251 vs. ExPASy Swiss-Prot
Match: MP2K6_BOVIN (Dual specificity mitogen-activated protein kinase kinase 6 OS=Bos taurus GN=MAP2K6 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.458e-17
Identity = 40/100 (40.00%), Postives = 60/100 (60.00%), Query Frame = -1
Query:  623 ESYSYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLKKDAEARPTADQLLSHPFITKYEHAKVDLAAFVRSV 922
            + YS  +DIWS+G+ + E     FPY +   P   + Q++E+PSP      FS EF  F   CLKK+++ RPT  +L+ HPF T +E    D+A+FV+S+
Sbjct:  232 KGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADKFSEEFVDFTSQCLKKNSKERPTYPELMQHPFFTLHESKATDVASFVKSI 331          
BLAST of CX675251 vs. ExPASy Swiss-Prot
Match: M2K1_ARATH (Mitogen-activated protein kinase kinase 1 OS=Arabidopsis thaliana GN=MKK1 PE=1 SV=2)

HSP 1 Score: 88.1965 bits (217), Expect = 7.237e-17
Identity = 42/100 (42.00%), Postives = 59/100 (59.00%), Query Frame = -1
Query:  635 YSYPADIWSIGLALFECGTGEFPYAASE------GPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLKKDAEARPTADQLLSHPFITKYEHAKVDLAAF 916
            YS  +DIWS+GL L EC TG+FPY   E          L+  I+E+P P      FSPEFCSF+  C++KD   R +A +LL H F+  +E +  +L+A+
Sbjct:  242 YSNKSDIWSLGLVLLECATGKFPYTPPEHKKGWSSVYELVDAIVENPPPCAPSNLFSPEFCSFISQCVQKDPRDRKSAKELLEHKFVKMFEDSDTNLSAY 341          
BLAST of CX675251 vs. ExPASy Swiss-Prot
Match: MP2K6_HUMAN (Dual specificity mitogen-activated protein kinase kinase 6 OS=Homo sapiens GN=MAP2K6 PE=1 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 9.451e-17
Identity = 39/100 (39.00%), Postives = 59/100 (59.00%), Query Frame = -1
Query:  623 ESYSYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLKKDAEARPTADQLLSHPFITKYEHAKVDLAAFVRSV 922
            + YS  +DIWS+G+ + E     FPY +   P   + Q++E+PSP      FS EF  F   CLKK+++ RPT  +L+ HPF T +E    D+A+FV+ +
Sbjct:  232 KGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPFFTLHESKGTDVASFVKLI 331          
BLAST of CX675251 vs. ExPASy Swiss-Prot
Match: MP2K2_XENLA (Dual specificity mitogen-activated protein kinase kinase 2 (Fragment) OS=Xenopus laevis GN=map2k2 PE=1 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.234e-16
Identity = 41/107 (38.32%), Postives = 59/107 (55.14%), Query Frame = -1
Query:  611 ESYSYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSR---QNFSPEFCSFVDDCLKKDAEARPTADQLLSHPFITKYEHAKVDLAAFVRSVFDPM 922
            + Y   +D+WS+G+ L+E  TG FPY       + + Q+++   P  S    + FSP F SFV+ CL KD   RP   +LL HPFI  YE   VD+A +V  + + M
Sbjct:  329 QGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDPPQLSNSEEREFSPSFTSFVNQCLTKDESKRPKYKELLKHPFILMYEERTVDVAGYVGKILEQM 435          
BLAST of CX675251 vs. ExPASy Swiss-Prot
Match: MP2K6_MOUSE (Dual specificity mitogen-activated protein kinase kinase 6 OS=Mus musculus GN=Map2k6 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.612e-16
Identity = 38/100 (38.00%), Postives = 59/100 (59.00%), Query Frame = -1
Query:  623 ESYSYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQILEDPSPSPSRQNFSPEFCSFVDDCLKKDAEARPTADQLLSHPFITKYEHAKVDLAAFVRSV 922
            + YS  +DIWS+G+ + E     FPY +   P   + Q++E+PSP      FS +F  F   CLKK+++ RPT  +L+ HPF T +E    D+A+FV+ +
Sbjct:  232 KGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADKFSADFVDFTSQCLKKNSKERPTYPELMQHPFFTVHESKAADVASFVKLI 331          
BLAST of CX675251 vs. ExPASy Swiss-Prot
Match: MP2K7_HUMAN (Dual specificity mitogen-activated protein kinase kinase 7 OS=Homo sapiens GN=MAP2K7 PE=1 SV=2)

HSP 1 Score: 85.5001 bits (210), Expect = 4.691e-16
Identity = 41/99 (41.41%), Postives = 61/99 (61.62%), Query Frame = -1
Query:  623 YSYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQIL-EDPSPSPSRQNFSPEFCSFVDDCLKKDAEARPTADQLLSHPFITKYEHAKVDLAAFVRSV 916
            Y   AD+WS+G++L E  TG+FPY   +    ++ ++L E+P   P    FS +F SFV DCL KD   RP  ++LL H FI +YE  +VD+A++ + V
Sbjct:  299 YDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPPLLPGHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEHSFIKRYETLEVDVASWFKDV 397          
BLAST of CX675251 vs. ExPASy Swiss-Prot
Match: MP2K7_RAT (Dual specificity mitogen-activated protein kinase kinase 7 OS=Rattus norvegicus GN=Map2k7 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 1.045e-15
Identity = 41/99 (41.41%), Postives = 60/99 (60.61%), Query Frame = -1
Query:  623 YSYPADIWSIGLALFECGTGEFPYAASEGPVNLMLQIL-EDPSPSPSRQNFSPEFCSFVDDCLKKDAEARPTADQLLSHPFITKYEHAKVDLAAFVRSV 916
            Y   AD+WS+G++L E  TG+FPY   +    ++ ++L E+P   P    FS +F SFV DCL KD   RP  ++LL H FI  YE  +VD+A++ + V
Sbjct:  299 YDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPPLLPGHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEHSFIKHYETLEVDVASWFKDV 397          
The following BLAST results are available for this feature:
BLAST of CX675251 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 22
Match NameE-valueIdentityDescription
M2K1_ORYSJ7.471e-2245.37Mitogen-activated protein kinase kinase 1 OS=Oryza... [more]
M2K6_ARATH4.843e-2142.48Mitogen-activated protein kinase kinase 6 OS=Arabi... [more]
M2K2_ARATH7.732e-1935.83Mitogen-activated protein kinase kinase 2 OS=Arabi... [more]
MP2K6_BOVIN1.458e-1740.00Dual specificity mitogen-activated protein kinase ... [more]
M2K1_ARATH7.237e-1742.00Mitogen-activated protein kinase kinase 1 OS=Arabi... [more]
MP2K6_HUMAN9.451e-1739.00Dual specificity mitogen-activated protein kinase ... [more]
MP2K2_XENLA1.234e-1638.32Dual specificity mitogen-activated protein kinase ... [more]
MP2K6_MOUSE1.612e-1638.00Dual specificity mitogen-activated protein kinase ... [more]
MP2K7_HUMAN4.691e-1641.41Dual specificity mitogen-activated protein kinase ... [more]
MP2K7_RAT1.045e-1541.41Dual specificity mitogen-activated protein kinase ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_60H05_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-60H05-O10-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX675251 ID=CX675251; Name=CX675251; organism=Citrus sinensis; type=EST; length=925bp
TTTTTAACATTAAACTCCAATATGTTCACAGGTGCCAACAATATACAAAA
CTGCTTGCAAGAAAGAACTGCAAGTTAGAAACTAGCCTTGAAAAGGGAAA
AAAAAATCATTGCAATTTTGTTAATCATTCATTCTATTGGGTAATATAAA
GTTCTTGTTTAGCAATAAAGTAACGCCCAATGAGATTTCCTGGTTCCACG
ATAAATTGCTCTTGAAATGTTCCCATTCTTTTACTAGAAACATCAATCGA
AAGATCTTTAAAATTTGGCAAGCCTTCGACTTGTACACCATCTCCACATA
TAAGGAATTGATTTCCGATCATAAAAGATCCCGAAGCACGAATTGCAATT
CCATCTTCACCATGGGCACGACAATGAAGTTTTTCCACAACATGTATTAA
TTTTTCAGGAGGCCAATCTCCAGCTAATGTCCTTCGAATATTTGTCAAAG
TCGCAAAAATATCATTTGGACCAACAAAATGCTTCCCGGAGAATCTCAAA
GTTGATCCTTCGTTATATAAAATTTTTAAATGTTGCCAAAGTTCATCTGG
TCCATCAAATAGCAAGTAATAGTGTATTGCAAGCATATCTGCCAAATCCT
TCATCCTTTGCATTGGATCAAATACACTTCGGACAAAAGCTGCTAAGTCC
ACTTTTGCATGCTCATACTTTGTAATAAATGGGTGTGAAAGAAGCTGATC
TGCTGTGGGCCTAGCCTCTGCATCCTTCTTGAGGCAATCATCAACAAATG
AACAAAATTCTGGTGAAAAGTTCTGTCTTGATGGTGATGGTGATGGATCC
TCCAAGATCTGCAACATCAAATTGACTGGTCCTTCACTAGCTGCATAAGG
AAATTCTCCTGTGCCACACTCAAAAAGAGCAAGACCAATGCTCCAAATAT
CAGCAGGATAAGAGTAGCTCTCATT
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