CK937084

Overview
NameCK937084
Unique NameCK937084
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length742
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9781 contig Csv1_Contig9781:24..765. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK937084 vs. ExPASy Swiss-Prot
Match: M2OM_DICDI (Probable mitochondrial 2-oxoglutarate/malate carrier protein OS=Dictyostelium discoideum GN=ucpC PE=3 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 2.496e-40
Identity = 85/182 (46.70%), Postives = 115/182 (63.19%), Query Frame = 3
Query:    3 VAGGIGAAVGNPADVAMVRMQADGRLPPAQRRNYKSVVDAITSMAKQEGVTSLWRGSSLTVNRAMLVTASQLASYDQIKENILSKGWMRDGLGTHVTXXXXXXXXXXXXXNPVDVIKTRVMNMKVEAGKEPPYKGALDCALKTVRSEGPMALYKGFIPTISRQGPFTVVLFVTLEQVRKLMK 548
            ++G  GA VG PAD+ MVRMQADG+LP   RRNYK+V D I  ++K+EG+ SLW+G S  + RAM +TA Q++SYDQ K+ +L+ G+  D + TH+              +P+DVIKTR+MN       E  YKG  DC  KT+R+EG  A YKGF P   R GP T++ F+ +EQ+  L K
Sbjct:  130 LSGAGGAIVGTPADLTMVRMQADGKLPFNLRRNYKNVFDGIFRISKEEGIISLWKGCSPNLIRAMFMTAGQVSSYDQTKQLMLASGYFHDDIKTHLIASTTAAFVAAVATSPLDVIKTRIMNSPKTVTGELQYKGTFDCLSKTLRAEGFKAFYKGFNPYFMRLGPQTILTFIFVEQLNILWK 311          
BLAST of CK937084 vs. ExPASy Swiss-Prot
Match: M2OM_MOUSE (Mitochondrial 2-oxoglutarate/malate carrier protein OS=Mus musculus GN=Slc25a11 PE=1 SV=3)

HSP 1 Score: 164.081 bits (414), Expect = 7.263e-40
Identity = 86/181 (47.51%), Postives = 115/181 (63.54%), Query Frame = 3
Query:    6 AGGIGAAVGNPADVAMVRMQADGRLPPAQRRNYKSVVDAITSMAKQEGVTSLWRGSSLTVNRAMLVTASQLASYDQIKENILSKGWMRDGLGTHVTXXXXXXXXXXXXXNPVDVIKTRVMNMKVEAGKEPPYKGALDCALKTVRSEGPMALYKGFIPTISRQGPFTVVLFVTLEQVRKLMK 548
            AG  GA VG PA+VA++RM ADGRLP  QRR YK+V +A+  +A++EGV +LWRG   T+ RA++V A+QLASY Q K+ +L  G+  D +  H                PVD++KTR+ NM++  GK P YK  LD  LK VR EG  +L+KGF P  +R GP TV+ F+ LEQ+ K  K
Sbjct:  129 AGATGAFVGTPAEVALIRMTADGRLPADQRRGYKNVFNALVRIAREEGVPTLWRGCIPTMARAVVVNAAQLASYSQSKQFLLDSGYFSDNILCHFCASMISGLVTTAASMPVDIVKTRIQNMRMIDGK-PEYKNGLDVLLKVVRYEGFFSLWKGFTPYYARLGPHTVLTFIFLEQMNKAYK 308          
BLAST of CK937084 vs. ExPASy Swiss-Prot
Match: M2OM_RAT (Mitochondrial 2-oxoglutarate/malate carrier protein OS=Rattus norvegicus GN=Slc25a11 PE=2 SV=3)

HSP 1 Score: 160.614 bits (405), Expect = 8.030e-39
Identity = 84/181 (46.41%), Postives = 115/181 (63.54%), Query Frame = 3
Query:    6 AGGIGAAVGNPADVAMVRMQADGRLPPAQRRNYKSVVDAITSMAKQEGVTSLWRGSSLTVNRAMLVTASQLASYDQIKENILSKGWMRDGLGTHVTXXXXXXXXXXXXXNPVDVIKTRVMNMKVEAGKEPPYKGALDCALKTVRSEGPMALYKGFIPTISRQGPFTVVLFVTLEQVRKLMK 548
            AG  GA VG PA+VA++RM ADGRLP  QRR YK+V +A+  +A++EGV +LWRG   T+ RA++V A+QLASY Q K+ +L  G+  D +  H                PVD++KTR+ NM++   ++P YK  LD  LK VR EG  +L+KGF P  +R GP TV+ F+ LEQ+ K  K
Sbjct:  129 AGATGAFVGPPAEVALIRMTADGRLPADQRRGYKNVFNALIRIAREEGVPTLWRGCIPTMARAVVVNAAQLASYSQSKQFLLDSGYFSDNILCHFCAIMISGLVTTAASMPVDIVKTRIQNMRM-IDEKPEYKNGLDVLLKVVRYEGFFSLWKGFTPYYARLGPHTVLTFIFLEQMNKAYK 308          
BLAST of CK937084 vs. ExPASy Swiss-Prot
Match: M2OM_BOVIN (Mitochondrial 2-oxoglutarate/malate carrier protein OS=Bos taurus GN=SLC25A11 PE=1 SV=3)

HSP 1 Score: 159.844 bits (403), Expect = 1.370e-38
Identity = 84/181 (46.41%), Postives = 114/181 (62.98%), Query Frame = 3
Query:    6 AGGIGAAVGNPADVAMVRMQADGRLPPAQRRNYKSVVDAITSMAKQEGVTSLWRGSSLTVNRAMLVTASQLASYDQIKENILSKGWMRDGLGTHVTXXXXXXXXXXXXXNPVDVIKTRVMNMKVEAGKEPPYKGALDCALKTVRSEGPMALYKGFIPTISRQGPFTVVLFVTLEQVRKLMK 548
            AG  GA VG PA+VA++RM ADGRLP  QRR YK+V +A+  + ++EGV +LWRG   T+ RA++V A+QLASY Q K+ +L  G+  D +  H                PVD++KTR+ NM++  GK P YK  LD  +K VR EG  +L+KGF P  +R GP TV+ F+ LEQ+ K  K
Sbjct:  129 AGATGAFVGTPAEVALIRMTADGRLPVDQRRGYKNVFNALFRIVQEEGVPTLWRGCIPTMARAVVVNAAQLASYSQSKQFLLDSGYFSDNILCHFCASMISGLVTTAASMPVDIVKTRIQNMRMIDGK-PEYKNGLDVLVKVVRYEGFFSLWKGFTPYYARLGPHTVLTFIFLEQMNKAYK 308          
BLAST of CK937084 vs. ExPASy Swiss-Prot
Match: M2OM_HUMAN (Mitochondrial 2-oxoglutarate/malate carrier protein OS=Homo sapiens GN=SLC25A11 PE=1 SV=3)

HSP 1 Score: 159.073 bits (401), Expect = 2.336e-38
Identity = 84/181 (46.41%), Postives = 112/181 (61.88%), Query Frame = 3
Query:    6 AGGIGAAVGNPADVAMVRMQADGRLPPAQRRNYKSVVDAITSMAKQEGVTSLWRGSSLTVNRAMLVTASQLASYDQIKENILSKGWMRDGLGTHVTXXXXXXXXXXXXXNPVDVIKTRVMNMKVEAGKEPPYKGALDCALKTVRSEGPMALYKGFIPTISRQGPFTVVLFVTLEQVRKLMK 548
            AG  GA VG PA+VA++RM ADGRLP  QRR YK+V +A+  + ++EGV +LWRG   T+ RA++V A+QLASY Q K+ +L  G+  D +  H                PVD+ KTR+ NM++  GK P YK  LD   K VR EG  +L+KGF P  +R GP TV+ F+ LEQ+ K  K
Sbjct:  129 AGATGAFVGTPAEVALIRMTADGRLPADQRRGYKNVFNALIRITREEGVLTLWRGCIPTMARAVVVNAAQLASYSQSKQFLLDSGYFSDNILCHFCASMISGLVTTAASMPVDIAKTRIQNMRMIDGK-PEYKNGLDVLFKVVRYEGFFSLWKGFTPYYARLGPHTVLTFIFLEQMNKAYK 308          
BLAST of CK937084 vs. ExPASy Swiss-Prot
Match: DIC_HUMAN (Mitochondrial dicarboxylate carrier OS=Homo sapiens GN=SLC25A10 PE=1 SV=2)

HSP 1 Score: 138.272 bits (347), Expect = 4.268e-32
Identity = 75/179 (41.90%), Postives = 106/179 (59.22%), Query Frame = 3
Query:    3 VAGGIGAAVGNPADVAMVRMQADGRLPPAQRRNYKSVVDAITSMAKQEGVTSLWRGSSLTVNRAMLVTASQLASYDQIKENILSKGWMRDGLGTHVTXXXXXXXXXXXXXNPVDVIKTRVMNMKVEAGKEPPYKGALDCALKTVRSEGPMALYKGFIPTISRQGPFTVVLFVTLEQVRK 539
            V+G  G  VG PAD+  VRMQ D +LP  QRRNY   +D +  +A++EG+  L+ G+++  +R  LVT  QL+ YDQ K+ +LS G++ D + TH                P+DV+KTR+MN K E      Y+G   CA++T +  GP+A YKG +P   R  P TV+ FV LEQ+RK
Sbjct:  108 VSGLAGGFVGTPADLVNVRMQNDVKLPQGQRRNYAHALDGLYRVAREEGLRRLFSGATMASSRGALVTVGQLSCYDQAKQLVLSTGYLSDNIFTHFVASFIAGGCATFLCQPLDVLKTRLMNSKGE------YQGVFHCAVETAKL-GPLAFYKGLVPAGIRLIPHTVLTFVFLEQLRK 279          
BLAST of CK937084 vs. ExPASy Swiss-Prot
Match: DIC_MOUSE (Mitochondrial dicarboxylate carrier OS=Mus musculus GN=Slc25a10 PE=2 SV=2)

HSP 1 Score: 135.576 bits (340), Expect = 2.766e-31
Identity = 72/179 (40.22%), Postives = 105/179 (58.66%), Query Frame = 3
Query:    3 VAGGIGAAVGNPADVAMVRMQADGRLPPAQRRNYKSVVDAITSMAKQEGVTSLWRGSSLTVNRAMLVTASQLASYDQIKENILSKGWMRDGLGTHVTXXXXXXXXXXXXXNPVDVIKTRVMNMKVEAGKEPPYKGALDCALKTVRSEGPMALYKGFIPTISRQGPFTVVLFVTLEQVRK 539
            ++G  G  VG PAD+  VRMQ D +LPP+QRRNY   +D +  +A++E +  L+ G+++  +R  LVT  QL+ YDQ K+ +LS G++ D + TH                P+DV+KTR+MN K E      Y+G   CA++T +  GP A +KG  P   R  P TV+ F+ LEQ+RK
Sbjct:  107 ISGLTGGFVGTPADLVNVRMQNDMKLPPSQRRNYSHALDGLYRVAREESLRKLFSGATMASSRGALVTVGQLSCYDQAKQLVLSTGYLSDNIFTHFVSSFIAGGCATFLCQPLDVLKTRLMNSKGE------YQGVFHCAMETAKL-GPQAFFKGLFPAGIRLIPHTVLTFMFLEQLRK 278          
BLAST of CK937084 vs. ExPASy Swiss-Prot
Match: KMCP1_MOUSE (Kidney mitochondrial carrier protein 1 OS=Mus musculus GN=Slc25a30 PE=1 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 6.814e-30
Identity = 70/181 (38.67%), Postives = 103/181 (56.91%), Query Frame = 3
Query:    3 VAGGIGAAVGNPADVAMVRMQADGRLPPAQRRNYKSVVDAITSMAKQEGVTSLWRGSSLTVNRAMLVTASQLASYDQIKENILSKGWMRDGLGTHVTXXXXXXXXXXXXXNPVDVIKTRVMNMK-VEAGKEPPYKGALDCALKTVRSEGPMALYKGFIPTISRQGPFTVVLFVTLEQVRKL 542
            ++G I +A+ NP DV  +RMQA              ++D+  S+ +QEG   LW+G SLT  RA +V   +L  YD  K++++  G M D + TH               NPVDV++TR+MN + +  G+   YKG LDC L+T ++EG  ALYKGF P   R GP+ ++ F+T EQ++KL
Sbjct:  115 LSGVISSAIANPTDVLKIRMQAQNSAVQG------GMIDSFMSIYQQEGTRGLWKGVSLTAQRAAIVVGVELPVYDITKKHLILSGLMGDTVATHFLSSFTCGLVGALASNPVDVVRTRMMNQRALRDGRCAGYKGTLDCLLQTWKNEGFFALYKGFWPNWLRLGPWNIIFFLTYEQLKKL 289          
BLAST of CK937084 vs. ExPASy Swiss-Prot
Match: UCP2_RAT (Mitochondrial uncoupling protein 2 OS=Rattus norvegicus GN=Ucp2 PE=2 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 5.768e-29
Identity = 70/179 (39.11%), Postives = 99/179 (55.31%), Query Frame = 3
Query:    9 GGIGAAVGNPADVAMVRMQADGRLPPAQRRNYKSVVDAITSMAKQEGVTSLWRGSSLTVNRAMLVTASQLASYDQIKENILSKGWMRDGLGTHVTXXXXXXXXXXXXXNPVDVIKTRVMNMKVEAGKEPPYKGALDCALKTVRSEGPMALYKGFIPTISRQGPFTVVLFVTLEQVRKLM 545
            G +  AV  P DV  VR QA  R    +R  Y+S V+A  ++A++EG+  LW+G+S  V R  +V  ++L +YD IK+ +L    M D L  H T             +PVDV+KTR MN  +       Y  A  CAL  +R EGP A YKGF+P+  R G + VV+FVT EQ+++ +
Sbjct:  127 GALAVAVAQPTDVVKVRFQAQARAGGGRR--YQSTVEAYKTIAREEGIRGLWKGTSPNVARNAIVNCTELVTYDLIKDTLLKANLMTDDLPCHFTSAFGAGFCTTVIASPVDVVKTRYMNSAL-----GQYHSAGHCALTMLRKEGPRAFYKGFMPSFLRLGSWNVVMFVTYEQLKRAL 298          
BLAST of CK937084 vs. ExPASy Swiss-Prot
Match: UCP2_MOUSE (Mitochondrial uncoupling protein 2 OS=Mus musculus GN=Ucp2 PE=2 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 5.768e-29
Identity = 70/179 (39.11%), Postives = 99/179 (55.31%), Query Frame = 3
Query:    9 GGIGAAVGNPADVAMVRMQADGRLPPAQRRNYKSVVDAITSMAKQEGVTSLWRGSSLTVNRAMLVTASQLASYDQIKENILSKGWMRDGLGTHVTXXXXXXXXXXXXXNPVDVIKTRVMNMKVEAGKEPPYKGALDCALKTVRSEGPMALYKGFIPTISRQGPFTVVLFVTLEQVRKLM 545
            G +  AV  P DV  VR QA  R    +R  Y+S V+A  ++A++EG+  LW+G+S  V R  +V  ++L +YD IK+ +L    M D L  H T             +PVDV+KTR MN  +       Y  A  CAL  +R EGP A YKGF+P+  R G + VV+FVT EQ+++ +
Sbjct:  127 GALAVAVAQPTDVVKVRFQAQARAGGGRR--YQSTVEAYKTIAREEGIRGLWKGTSPNVARNAIVNCAELVTYDLIKDTLLKANLMTDDLPCHFTSAFGAGFCTTVIASPVDVVKTRYMNSAL-----GQYHSAGHCALTMLRKEGPRAFYKGFMPSFLRLGSWNVVMFVTYEQLKRAL 298          
The following BLAST results are available for this feature:
BLAST of CK937084 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 70
Match NameE-valueIdentityDescription
M2OM_DICDI2.496e-4046.70Probable mitochondrial 2-oxoglutarate/malate carri... [more]
M2OM_MOUSE7.263e-4047.51Mitochondrial 2-oxoglutarate/malate carrier protei... [more]
M2OM_RAT8.030e-3946.41Mitochondrial 2-oxoglutarate/malate carrier protei... [more]
M2OM_BOVIN1.370e-3846.41Mitochondrial 2-oxoglutarate/malate carrier protei... [more]
M2OM_HUMAN2.336e-3846.41Mitochondrial 2-oxoglutarate/malate carrier protei... [more]
DIC_HUMAN4.268e-3241.90Mitochondrial dicarboxylate carrier OS=Homo sapien... [more]
DIC_MOUSE2.766e-3140.22Mitochondrial dicarboxylate carrier OS=Mus musculu... [more]
KMCP1_MOUSE6.814e-3038.67Kidney mitochondrial carrier protein 1 OS=Mus musc... [more]
UCP2_RAT5.768e-2939.11Mitochondrial uncoupling protein 2 OS=Rattus norve... [more]
UCP2_MOUSE5.768e-2939.11Mitochondrial uncoupling protein 2 OS=Mus musculus... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004514_E11 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0002_IF_E11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK937084 ID=CK937084; Name=CK937084; organism=Citrus sinensis; type=EST; length=742bp
GGGTTGCTGGTGGAATAGGAGCCGCCGTCGGCAATCCCGCCGACGTGGCA
ATGGTCCGCATGCAGGCTGACGGAAGGCTCCCTCCCGCGCAGCGTCGCAA
CTACAAGAGCGTCGTCGACGCTATAACCAGCATGGCCAAACAAGAAGGCG
TGACCAGCCTGTGGCGAGGATCGTCCCTTACTGTGAACCGGGCCATGCTG
GTCACCGCGTCGCAGCTGGCGTCCTACGATCAGATCAAAGAAAATATACT
GTCAAAAGGGTGGATGCGCGACGGCCTCGGGACCCACGTGACGGCGAGTT
TTTCTGCGGGGTTTGTGGCGGCGGTGGCGTCGAATCCTGTGGACGTGATA
AAGACTAGGGTTATGAACATGAAGGTCGAGGCCGGGAAAGAGCCGCCGTA
CAAAGGGGCGCTGGATTGTGCCCTGAAGACGGTTCGGAGCGAGGGGCCGA
TGGCTCTGTATAAGGGTTTTATCCCTACGATTTCCAGACAAGGGCCGTTT
ACTGTTGTCCTGTTTGTTACGCTTGAACAGGTCAGGAAGTTGATGAAGGA
TTTCTGAGGATGATGACGACAACGACGATCAAAATTAGATATGTTTTGAT
GTGGATTTATTATTAATTATTCGCAGTTTAATTCACAAGGAAGAAAATAA
ACATGTGATTCAATTCAGAATGCTTGTACTAGTGATTCGTGTGTTTGCTT
CGCAGCATGTGATTTATCATATACGCGTTCTGGAATTAAGAT
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