CK937067

Overview
NameCK937067
Unique NameCK937067
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length735
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CK937067_ssr574 microsatellite CK937067_ssr574:574..585. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig2000 contig Csv1_Contig2000:1..735. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK937067 vs. ExPASy Swiss-Prot
Match: C71DB_LOTJA (Cytochrome P450 71D11 (Fragment) OS=Lotus japonicus GN=CYP71D11 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.513e-13
Identity = 36/114 (31.58%), Postives = 65/114 (57.02%), Query Frame = 1
Query:  250 HKKFTELSGVYGPIFKLWLGNKLCVVVSSPSLVKQVVRDQDTTFAYRDPPIAGLVATFGGNDIAWSNYGPEWRKLRKFFVGKMMSNASLDACYALRKQEVKNTIRDLYNNNNKI 591
            H+K  +L+  YGP+  L LG  + ++VSS    K+V++  D TFA R   +   +  +G  DI +S YG  WR++RK    +++S   + + + +R++EVKN I+ + +    +
Sbjct:   41 HRKLRDLAKKYGPLMHLQLGEVIFIIVSSAEYAKEVMKTHDVTFASRPRSLFTDIVFYGSTDIGFSPYGDYWRQVRKICNVELLSMKRVQSLWPIREEEVKNLIQRIASEEGSV 154          
BLAST of CK937067 vs. ExPASy Swiss-Prot
Match: C99A1_SORBI (Cytochrome P450 CYP99A1 (Fragment) OS=Sorghum bicolor GN=CYP99A1 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.854e-12
Identity = 36/111 (32.43%), Postives = 63/111 (56.76%), Query Frame = 1
Query:  232 LGTTDLHKKFTELSGVYGPIFKLWLGNKLCVVVSSPSLVKQVVRDQDTTFAYRDPPIAGLVATFGGNDIAWSNYGPEWRKLRKFFVGKMMSNASLDACYALRKQEVKNTIR 564
            L T+  H    +L+  +GP+  L LG    VV+SSP+  ++V+RD+DTTFA R   +   +  +G  D++++ YG  WR LRK  + ++++   +    A+R  E  + +R
Sbjct:   43 LATSQPHVALRDLAMKHGPVMYLRLGQVDAVVISSPAAAQEVLRDKDTTFASRPSLLVADIILYGSMDMSFAPYGGNWRMLRKLCMSELLNTHKVRQLAAVRDSETLSLVR 153          
BLAST of CK937067 vs. ExPASy Swiss-Prot
Match: C98A2_SOYBN (Cytochrome P450 98A2 OS=Glycine max GN=CYP98A2 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.728e-12
Identity = 35/107 (32.71%), Postives = 60/107 (56.07%), Query Frame = 1
Query:  259 FTELSGVYGPIFKLWLGNKLCVVVSSPSLVKQVVRDQDTTFAYRDPPIAGLVATFGGNDIAWSNYGPEWRKLRKFFVGKMMSNASLDACYALRKQEVKNTIRDLYNN 579
            F E +  YGPI  +W G+ L V+VS+  L K+V+++ D   A R    +    +  G D+ W++YGP + K+RK    ++ S   L+A   +R+ EV + +  +YN+
Sbjct:   52 FAEWAQSYGPIISVWFGSTLNVIVSNSELAKEVLKEHDQLLADRHRSRSAAKFSRDGKDLIWADYGPHYVKVRKVCTLELFSPKRLEALRPIREDEVTSMVDSVYNH 158          
BLAST of CK937067 vs. ExPASy Swiss-Prot
Match: C99A3_ORYSJ (Cytochrome P450 99A3 OS=Oryza sativa subsp. japonica GN=CYP99A3 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.869e-12
Identity = 48/154 (31.17%), Postives = 76/154 (49.35%), Query Frame = 1
Query:  265 ELSGVYGPIFKLWLGNKLCVVVSSPSLVKQVVRDQDTTFAYRDPPIAGLVATFGGNDIAWSNYGPEWRKLRKFFVGKMMSNASLDACYALRKQEVKNTIRDLYNNNNKICKPIDIGELSVSTLVCAMQNMLWGEAL--ELKEKGTTILGVELKF 720
            +L+G YGP+  L  G    VV+SSP+  ++V+RD+D TFA R   +   +  +G  DI ++ YG  WR LRK    +++S   +     +R  E    +R++        KP  +  L +S          +G+A   EL+E+  T L   LKF
Sbjct:   62 DLAGKYGPVMFLRTGQVDTVVISSPAAAQEVLRDKDVTFASRPSLLVSEIFCYGNLDIGFAPYGAYWRMLRKLCTVELLSTKMVRQLAPIRDGETLALVRNIEAAAGG-KKPFTLATLLISCTNTFTAKAAFGQACGGELQEQFLTALDEALKF 214          
BLAST of CK937067 vs. ExPASy Swiss-Prot
Match: C93B1_GLYEC (Licodione synthase OS=Glycyrrhiza echinata GN=CYP93B1 PE=1 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 1.085e-11
Identity = 44/146 (30.14%), Postives = 77/146 (52.74%), Query Frame = 1
Query:  247 LHKKFTELSGVYGPIFKLWLGNKLCVVVSSPSLVKQVVRDQDTTFAYRDPPIAGLVATFGGNDIAWSNYGPEWRKLRKFFVGKMMSNASLDACYALRKQEVKNTIRDLYNNNNKICKPIDIGELSVSTLVCAMQNMLWGEALELKE 684
            LH+ F  LS  YGP+F L  G+ LCVV S+P   KQ+++  +  F  R    A    T+  + +A++ YG  WR ++K  + +++ + S++    LR QE    +R L +N  +  + ++I E  +      +  M+ GEA E ++
Sbjct:   53 LHQSFHNLSHRYGPLFSLNFGSVLCVVASTPHFAKQLLQTNELAFNCRIESTAVKKLTY-ESSLAFAPYGDYWRFIKKLSMNELLGSRSINNFQHLRAQETHQLLR-LLSNRARAFEAVNITEELLKLTNNVISIMMVGEAEEARD 196          
BLAST of CK937067 vs. ExPASy Swiss-Prot
Match: C75A1_PINTA (Cytochrome P450 750A1 OS=Pinus taeda GN=CYP750A1 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.085e-11
Identity = 41/138 (29.71%), Postives = 73/138 (52.90%), Query Frame = 1
Query:  247 LHKKFTELSGVYGPIFKLWLGNKLCVVVSSPSLVKQVVRDQDTTFAYRDPPIAGLVATFGGNDIAWSNYGPEWRKLRKFFVGKMMSNASLDACYALRKQEVKNTIRDLYNNNNKICKPIDIGELSVSTLVCAMQNMLW 660
            LH+    L+  YGPI  L  G+   VVVSS    K  ++  D  FA R P   G    +   DIA+S YG  WRK+RK  V +++++  +++   +R++E+   I  ++  +      +++ + ++ST   ++ N+LW
Sbjct:   62 LHRTLKNLAEKYGPILFLRFGSVPTVVVSSSEKAKHFLKTHDLIFASRPPTSVGKYFFYNFKDIAFSPYGDHWRKMRKICVLELLTSKRIESFKHVRQEELSAMIHSIWEESESGRIAVNVSK-AIST---SLANILW 195          
BLAST of CK937067 vs. ExPASy Swiss-Prot
Match: C71D7_SOLCH (Cytochrome P450 71D7 OS=Solanum chacoense GN=CYP71D7 PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.085e-11
Identity = 37/104 (35.58%), Postives = 59/104 (56.73%), Query Frame = 1
Query:  250 HKKFTELSGVYGPIFKLWLGNKLCVVVSSPSLVKQVVRDQDTTFAYRDPPIAGLVATFGGNDIAWSNYGPEWRKLRKFFVGKMMSNASLDACYALRKQEVKNTI 561
            H+   +L+  YGP+  L LG    VVV+SP + KQV++  D  FA R   +A  +  +   DIA+S YG  WR++RK  + +++S  S+ +  ++R  EV   I
Sbjct:   53 HRVLRDLAEKYGPLMHLQLGEVSAVVVTSPEMAKQVLKTHDIAFASRPKLLAMDIICYNRRDIAFSPYGDYWRQMRKICIMEVLSAKSVRSFSSIRHDEVVRLI 156          
BLAST of CK937067 vs. ExPASy Swiss-Prot
Match: C99A2_ORYSJ (Cytochrome P450 99A2 OS=Oryza sativa subsp. japonica GN=CYP99A2 PE=2 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 2.416e-11
Identity = 46/159 (28.93%), Postives = 77/159 (48.43%), Query Frame = 1
Query:  265 ELSGVYGPIFKLWLGNKLCVVVSSPSLVKQVVRDQDTTFAYRDPPIAGLVATFGGNDIAWSNYGPEWRKLRKFFVGKMMSNASLDACYALRKQEVKNTIRDLY-----NNNNKICKPIDIGELSVSTLVCAMQNMLWGEA--LELKEKGTTILGVELKF 720
            EL+  YGP+  L +G    VVVSSP+  ++V+RD+D  FA R   +   +  +   D+ ++ YG  WR LRK    +++S   +     +R  E    +R++      +      KP+ +  L  +          +G+A  +EL+E+  T L V LKF
Sbjct:   86 ELASKYGPVMFLRMGQIDTVVVSSPAAAQEVLRDKDVMFASRPSLLVSEIFCYDNLDVGFAPYGAYWRMLRKLCTVELLSTKVVRQLAPVRNDETLTLVRNIKAASSGHGGGGGKKPVTLARLLTTCTNTITAKAAFGQACGVELQEQFLTALDVGLKF 244          
BLAST of CK937067 vs. ExPASy Swiss-Prot
Match: C76C1_ARATH (Cytochrome P450 76C1 OS=Arabidopsis thaliana GN=CYP76C1 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.122e-11
Identity = 43/155 (27.74%), Postives = 77/155 (49.68%), Query Frame = 1
Query:  250 HKKFTELSGVYGPIFKLWLGNKLCVVVSSPSLVKQVVRDQDTTFAYRDPPIAGLVATFGGNDIAW-SNYGPEWRKLRKFFVGKMMSNASLDACYALRKQEVKNTIRDLYNNNNKICKPIDIGELSVSTLVCAMQNMLWGEALELKEKGTTILGVE 711
            H+ F ELS  YGP+  L LG+   VV++SP   ++V+R  D   + R P  A          + W  +    WR LR+  V +++S   ++A  ALR  +VK  +  +  ++++  + +DI  ++  T +  + N+L+   L       +I GV+
Sbjct:   59 HRSFAELSKTYGPVMSLKLGSLNTVVIASPEAAREVLRTHDQILSARSPTNAVRSINHQDASLVWLPSSSARWRLLRRLSVTQLLSPQRIEATKALRMNKVKELVSFISESSDRE-ESVDISRVAFITTLNIISNILFSVDLGSYNAKASINGVQ 212          
BLAST of CK937067 vs. ExPASy Swiss-Prot
Match: C71D6_SOLCH (Cytochrome P450 71D6 OS=Solanum chacoense GN=CYP71D6 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 7.030e-11
Identity = 36/112 (32.14%), Postives = 64/112 (57.14%), Query Frame = 1
Query:  250 HKKFTELSGVYGPIFKLWLGNKLCVVVSSPSLVKQVVRDQDTTFAYRDPPIAGLVATFGGNDIAWSNYGPEWRKLRKFFVGKMMSNASLDACYALRKQEVKNTIRDLYNNNN 585
            H+   +L+  YGP+  L LG    VVV+SP + K+V++  D  FA R   +A  +  +   DIA+S YG  W+++RK  V +++S  S+ +  ++R  EV   I  + ++++
Sbjct:   53 HRVLRDLAKKYGPLMHLQLGEVSAVVVTSPDMAKEVLKTHDIAFASRPKLLAMDIICYDRCDIAFSPYGEYWKQMRKICVTEVLSAKSVRSFSSIRCDEVVRLIDSIQSSSS 164          
The following BLAST results are available for this feature:
BLAST of CK937067 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
C71DB_LOTJA1.513e-1331.58Cytochrome P450 71D11 (Fragment) OS=Lotus japonicu... [more]
C99A1_SORBI2.854e-1232.43Cytochrome P450 CYP99A1 (Fragment) OS=Sorghum bico... [more]
C98A2_SOYBN3.728e-1232.71Cytochrome P450 98A2 OS=Glycine max GN=CYP98A2 PE=... [more]
C99A3_ORYSJ4.869e-1231.17Cytochrome P450 99A3 OS=Oryza sativa subsp. japoni... [more]
C93B1_GLYEC1.085e-1130.14Licodione synthase OS=Glycyrrhiza echinata GN=CYP9... [more]
C75A1_PINTA1.085e-1129.71Cytochrome P450 750A1 OS=Pinus taeda GN=CYP750A1 P... [more]
C71D7_SOLCH1.085e-1135.58Cytochrome P450 71D7 OS=Solanum chacoense GN=CYP71... [more]
C99A2_ORYSJ2.416e-1128.93Cytochrome P450 99A2 OS=Oryza sativa subsp. japoni... [more]
C76C1_ARATH4.122e-1127.74Cytochrome P450 76C1 OS=Arabidopsis thaliana GN=CY... [more]
C71D6_SOLCH7.030e-1132.14Cytochrome P450 71D6 OS=Solanum chacoense GN=CYP71... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004514_G10 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0002_IF_G10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK937067 ID=CK937067; Name=CK937067; organism=Citrus sinensis; type=EST; length=735bp
GGGGCTCATCAGATATTTCGTTAAAATTCATCCTGAAACACTAAAACTAA
ATAATCGAATATGGGTTTGCGGGTCAATGATGCCAGAAGCAATGAGAGTG
CAATTATCACTTGTTTAGTTTCTGTGCTTGCCGTGGTTTACTTCGCATGG
AATGTGAAAAAATCAAGGAAAGCAAATGCTAAACTTCCACCAGGACCTCG
CGGCTTGCCTGTAGTCGGATACCTCCCATTTCTCGGAACTACTGACTTGC
ACAAGAAATTCACGGAATTATCCGGAGTTTATGGTCCGATCTTCAAGCTC
TGGCTCGGAAATAAATTATGTGTAGTGGTGAGCTCACCTTCCCTAGTTAA
ACAAGTGGTTCGTGATCAAGATACAACATTCGCATACCGTGACCCGCCGA
TCGCTGGACTAGTGGCCACCTTTGGTGGCAATGATATTGCATGGTCCAAT
TACGGTCCCGAATGGAGAAAGTTGCGCAAATTTTTTGTGGGCAAGATGAT
GAGTAACGCAAGCCTTGATGCTTGTTATGCTCTAAGAAAACAAGAGGTTA
AAAATACTATCAGGGATTTGTATAACAACAACAACAAAATTTGCAAGCCC
ATTGACATTGGTGAATTGTCGGTTTCAACACTGGTATGTGCTATGCAGAA
CATGCTGTGGGGTGAAGCGCTTGAATTAAAAGAGAAAGGGACCACTATTC
TTGGGGTTGAGCTAAAATTTAAGCTTGCAGAACTC
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