CK937038

Overview
NameCK937038
Unique NameCK937038
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length602
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CK937038 vs. ExPASy Swiss-Prot
Match: ASP_THECC (21 kDa seed protein OS=Theobroma cacao GN=ASP PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 4.825e-19
Identity = 43/84 (51.19%), Postives = 57/84 (67.86%), Query Frame = 2 
Query:   44 CSEQPLWKVDNYDAASGKWFITTGGLDGHPGAETLLNWFKLEKIGNFPGIYKIVHCPSVCESCVKLCHNVGR-SFEDGVRRLVL 292
            CS   +W++DNYD ++GKW++TT G+ G PG  TL +WFK+EK G     YK   CPSVC+SC  LC ++GR S +DG  RL L
Sbjct:  116 CSTSTVWRLDNYDNSAGKWWVTTDGVKGEPGPNTLCSWFKIEKAGVLG--YKFRFCPSVCDSCTTLCSDIGRHSDDDGQIRLAL 197
[Close]
BLAST of CK937038 vs. ExPASy Swiss-Prot
Match: MIRA_RICDU (Miraculin OS=Richadella dulcifica PE=1 SV=3)

HSP 1 Score: 83.1889 bits (204), Expect = 1.112e-15
Identity = 40/104 (38.46%), Postives = 63/104 (60.58%), Query Frame = 2 
Query:    5 NLRFSVLLSGRDYCSEQPLWKVDNYDAASGKWFITTGGLDGHPGAETLLNWFKLEKIGNFPGIYKIVHCPSVCESCVKLCHNVGRSFEDGVRRLVLVRDDGPAF 316
            N+ FS  +  R   +   +W++D YD ++G++F+T GG+ G+PG ET+ +WFK+E+     G YK+V CP+VC SC   C +VG   +   RR + + D   AF
Sbjct:  112 NINFSAFMPCR--WTSSTVWRLDKYDESTGQYFVTIGGVKGNPGPETISSWFKIEEFCG-SGFYKLVFCPTVCGSCKVKCGDVGIYIDQKGRRRLALSDKPFAF 212
The following BLAST results are available for this feature:
BLAST of CK937038 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
ASP_THECC4.825e-1951.1921 kDa seed protein OS=Theobroma cacao GN=ASP PE=2... [more]
MIRA_RICDU1.112e-1538.46Miraculin OS=Richadella dulcifica PE=1 SV=3[more]
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Properties
Property NameValue
Genbank descriptionCGF1004515_A01 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0002_IIF_A01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK937038 ID=CK937038; Name=CK937038; organism=Citrus sinensis; type=EST; length=602bp
GGGCAACTTGAGATTCTCAGTGTTGCTATCTGGACGTGACTATTGTAGCG
AACAACCGTTGTGGAAAGTTGATAATTATGACGCGGCATCAGGCAAATGG
TTTATAACAACCGGGGGACTTGATGGTCACCCTGGAGCTGAAACTTTGCT
AAATTGGTTTAAGCTTGAGAAAATTGGAAATTTTCCAGGTATATACAAAA
TCGTTCATTGTCCATCCGTTTGCGAGTCTTGTGTCAAACTCTGCCACAAC
GTTGGCCGTTCGTTTGAGGATGGCGTTCGACGTCTGGTTCTGGTTCGTGA
TGATGGGCCGGCATTTCCTGTTGTGTTAATTCCCGCTACAGAAAGATTAA
CGTCTGTGTAATCAATGTACCCTAACCAGCTAGCGGTATTATTATTCTAA
ATAACGGACCAGGCTAGCTGCTCCTTAATCTCTAGGATTAAAATTATGAA
TAAGTACCCTGTGATCCTTTCGGGGTTAATAAATTCTACTGTTGGTGTAT
ACCTTATGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAGGAAAAAAAAAAAAAAAAAAAAAAAAA
AA
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