CX675231

Overview
NameCX675231
Unique NameCX675231
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length772
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8417 contig Csv1_Contig8417:83..854. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX675231 vs. ExPASy Swiss-Prot
Match: SUOX_ARATH (Sulfite oxidase OS=Arabidopsis thaliana GN=SOX PE=1 SV=1)

HSP 1 Score: 282.722 bits (722), Expect = 1.501e-75
Identity = 126/168 (75.00%), Postives = 148/168 (88.10%), Query Frame = -1
Query:  269 NILAEECQGFFMQKDYKMFPPSVNWDNINWKSRRPLMDFPVQCVICSLEDVNVMKPGKAKVSGYAVSGGGRGIERVDISVDGGKNWVEASRYQKTGIPYIADHMSSDKWAWVFFEVIIDIPHSTQIVAKAVDTAANVQPESVETIWNLRGVLNTSWHRVQVRVGHSNM 772
            N++AEE QGFFMQKDYKMFPPSVNWDNINW SRRP MDFPVQ  ICS+EDV ++KPGK  + GYAVSGGGRGIERVDIS+DGGKNWVEASR Q+ G  YI++H SSDKWAWV FE  ID+  +T+++AKAVD+AANVQPE+VE++WNLRGVLNTSWHRV +R+GHSN+
Sbjct:  226 NVIAEESQGFFMQKDYKMFPPSVNWDNINWSSRRPQMDFPVQSAICSVEDVQMVKPGKVSIKGYAVSGGGRGIERVDISLDGGKNWVEASRTQEPGKQYISEHSSSDKWAWVLFEATIDVSQTTEVIAKAVDSAANVQPENVESVWNLRGVLNTSWHRVLLRLGHSNL 393          
BLAST of CX675231 vs. ExPASy Swiss-Prot
Match: SUOX_MOUSE (Sulfite oxidase, mitochondrial OS=Mus musculus GN=Suox PE=1 SV=2)

HSP 1 Score: 133.265 bits (334), Expect = 1.471e-30
Identity = 66/166 (39.76%), Postives = 98/166 (59.04%), Query Frame = -1
Query:  284 NILAEECQGFFMQKDYKMFPPSVNWDNINWKSRRPLMDFPVQCVICSLEDVNVMKPGKAKVSGYAVSGGGRGIERVDISVDGGKNWVEASRYQKTGIPYIADHMSSDKWAWVFFEVIIDIP---HSTQIVAKAVDTAANVQPESVETIWNLRGVLNTSWHRVQVRV 772
            ++ +EE    + ++DYK F PSV+WD +N+     + + P+Q  I   +D  +++ G+  + GYA SGGGR + RVD+SVDGG  W EA    +   P  A       WAW  +++   +P       I+ KAVD + NVQP++V  IWNLRGVL+ +WHRV V+V
Sbjct:  386 SVESEESYSHWQRRDYKGFSPSVDWDTVNFDLAPSIQELPIQSAITQPQDGAIVESGEVTIKGYAWSGGGRAVIRVDVSVDGGLTWQEAELEGEEQCPRKA-------WAWRIWQLKAQVPAEQKELNIICKAVDDSYNVQPDTVAPIWNLRGVLSNAWHRVHVQV 544          
BLAST of CX675231 vs. ExPASy Swiss-Prot
Match: SUOX_RAT (Sulfite oxidase, mitochondrial OS=Rattus norvegicus GN=Suox PE=1 SV=2)

HSP 1 Score: 127.872 bits (320), Expect = 6.179e-29
Identity = 64/166 (38.55%), Postives = 97/166 (58.43%), Query Frame = -1
Query:  284 NILAEECQGFFMQKDYKMFPPSVNWDNINWKSRRPLMDFPVQCVICSLEDVNVMKPGKAKVSGYAVSGGGRGIERVDISVDGGKNWVEASRYQKTGIPYIADHMSSDKWAWVFFEVIIDIP---HSTQIVAKAVDTAANVQPESVETIWNLRGVLNTSWHRVQVRV 772
            ++ +EE    + ++DYK F PSV+WD +++     + + P+Q  I   +D   ++ G+  + GYA SGGGR + RVD+S+DGG  W EA    +   P  A       WAW  +++   +P       I+ KAVD + NVQP++V  IWNLRGVL+ +WHRV V+V
Sbjct:  386 SVESEESYSHWQRRDYKGFSPSVDWDTVDFDLAPSIQELPIQSAITQPQDGTTVESGEVIIKGYAWSGGGRAVIRVDVSMDGGLTWQEAELEGEEQHPRKA-------WAWRIWQLKAHVPAEQKELNIICKAVDDSYNVQPDTVAPIWNLRGVLSNAWHRVHVQV 544          
BLAST of CX675231 vs. ExPASy Swiss-Prot
Match: SUOX_CHICK (Sulfite oxidase OS=Gallus gallus GN=SUOX PE=1 SV=3)

HSP 1 Score: 127.487 bits (319), Expect = 8.070e-29
Identity = 64/156 (41.03%), Postives = 91/156 (58.33%), Query Frame = -1
Query:  299 EECQGFFMQKDYKMFPPSVNWDNINWKSRRPLMDFPVQCVICSLEDVNVMKPGKAKVSGYAVSGGGRGIERVDISVDGGKNWVEASRYQKTGIPYIADHMSSDKWAWVFFEVIIDIPHST--QIVAKAVDTAANVQPESVETIWNLRGVLNTSWHR 760
            +E    + Q DYK F P V+WD +++++   + + PVQ  +        + PG+  V GYA SGGGR + RVD+S+DGG+ W  A        P  A       WAW  +E+ + +   T  +IV KAVD++ NVQP+SV  IWNLRGVL+T+WHR
Sbjct:  311 DESPSRWQQNDYKGFSPCVDWDTVDYRTAPAIQELPVQSAVTQPRPGAAVPPGELTVKGYAWSGGGREVVRVDVSLDGGRTWKVARLMGDKAPPGRA-------WAWALWELTVPVEAGTELEIVCKAVDSSYNVQPDSVAPIWNLRGVLSTAWHR 459          
BLAST of CX675231 vs. ExPASy Swiss-Prot
Match: SUOX_MACFA (Sulfite oxidase, mitochondrial OS=Macaca fascicularis GN=SUOX PE=2 SV=3)

HSP 1 Score: 125.561 bits (314), Expect = 3.067e-28
Identity = 66/166 (39.76%), Postives = 93/166 (56.02%), Query Frame = -1
Query:  284 NILAEECQGFFMQKDYKMFPPSVNWDNINWKSRRPLMDFPVQCVICSLEDVNVMKPGKAKVSGYAVSGGGRGIERVDISVDGGKNWVEASRYQKTGIPYIADHMSSDKWAWVFFEVIIDIP---HSTQIVAKAVDTAANVQPESVETIWNLRGVLNTSWHRVQVRV 772
            ++  EE    + ++DYK F PSV+WD +++ S   + + PVQ  I    D   ++ G+  + GYA SGGGR + RVD+S+DGG  W  A    +   P  A       WAW  +++   +P       IV KAVD   NVQP++V  IWNLRGVL+ +WHRV V V
Sbjct:  385 SVQPEESYSHWQRRDYKGFSPSVDWDTVDFDSAPSIQELPVQSAITEPRDGETVESGEVTIKGYAWSGGGRAVIRVDVSLDGGLTWQVAKLDGEEQRPRKA-------WAWRLWQLQAPVPAGQKELNIVCKAVDDGYNVQPDTVAPIWNLRGVLSNAWHRVHVFV 543          
BLAST of CX675231 vs. ExPASy Swiss-Prot
Match: SUOX_HUMAN (Sulfite oxidase, mitochondrial OS=Homo sapiens GN=SUOX PE=1 SV=2)

HSP 1 Score: 124.405 bits (311), Expect = 6.832e-28
Identity = 65/166 (39.16%), Postives = 93/166 (56.02%), Query Frame = -1
Query:  284 NILAEECQGFFMQKDYKMFPPSVNWDNINWKSRRPLMDFPVQCVICSLEDVNVMKPGKAKVSGYAVSGGGRGIERVDISVDGGKNWVEASRYQKTGIPYIADHMSSDKWAWVFFEVIIDIP---HSTQIVAKAVDTAANVQPESVETIWNLRGVLNTSWHRVQVRV 772
            ++  EE    + ++DYK F PSV+W+ +++ S   + + PVQ  I    D   ++ G+  + GYA SGGGR + RVD+S+DGG  W  A    +   P  A       WAW  +++   +P       IV KAVD   NVQP++V  IWNLRGVL+ +WHRV V V
Sbjct:  385 SVQPEESYSHWQRRDYKGFSPSVDWETVDFDSAPSIQELPVQSAITEPRDGETVESGEVTIKGYAWSGGGRAVIRVDVSLDGGLTWQVAKLDGEEQRPRKA-------WAWRLWQLKAPVPAGQKELNIVCKAVDDGYNVQPDTVAPIWNLRGVLSNAWHRVHVYV 543          
BLAST of CX675231 vs. ExPASy Swiss-Prot
Match: SUOX_DROME (Probable sulfite oxidase, mitochondrial OS=Drosophila melanogaster GN=CG7280 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.074e-20
Identity = 59/169 (34.91%), Postives = 87/169 (51.48%), Query Frame = -1
Query:  284 EECQGFFMQKDYKMFPPSVNWDNINWKSRRPLMDFPVQCVICSLEDVNVMK----PGKAKVSGYAVSGGGRGIERVDISVDGGKNWVEASRYQKTGIPYIADHMSSDKWAWVFFEVIIDIPHS------TQIVAKAVDTAANVQPESVETIWNLRGVLNTSWHRVQVRV 760
            +E    + Q DYK F PS +WD +++     +   PV   IC+ +    +K     G   V GYA SGGGR I RVD++ D G +W  A   Q+       +      + W  +   + +  +       +I AKAVD+A NVQPE  E IWNLRGVL  ++H+V+V++
Sbjct:  411 KESDSHWQQNDYKGFSPSTDWDTVDFSKSDAIQAMPVTSAICTPQPGARVKVDDDEGHITVRGYAWSGGGRKIVRVDLTNDEGVSWHVAELEQE-------EMPDGRHYGWSLWTARLPVSEAQRRAGDVEIWAKAVDSAYNVQPEKFEHIWNLRGVLANAYHKVKVKI 572          
BLAST of CX675231 vs. ExPASy Swiss-Prot
Match: NIA_LOTJA (Nitrate reductase [NADH] OS=Lotus japonicus GN=NIA PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 9.578e-14
Identity = 48/176 (27.27%), Postives = 87/176 (49.43%), Query Frame = -1
Query:  284 ILAEECQGFFMQKDYKMFPPSVNWDNIN-----WKSRRPLMDFPVQCVICS-----LEDVNVMKPGKA-KVSGYAVSGGGRGIERVDISVDGGKNWVEASRYQKTGIPYIADHMSSDKWAWVFFEV---IIDIPHSTQIVAKAVDTAANVQPESVETIWNLRGVLNTSWHRVQVRV 769
            +  EEC G +  KD ++ P  V+ +  N     +K    + +  +  VI +     +  +N     +   + GY+ SGGGR + RV++++DGG+ W   +  Q+        +     W W F+ +   ++D+  + +I  +A D A N QPE++  IWN+ G++N  W RV+  V
Sbjct:  297 VTEEECDGHYHYKDNRVLPSHVDAELANEEGWWYKPEYIINELNINSVITTPCHDEILPINAWTTQRPYTLRGYSYSGGGRKVTRVEVTLDGGETWFVCALDQQE-----KPNKYGKYWCWCFWSLEVEVLDLLGTKEIAVRAWDEALNTQPENL--IWNVMGMMNNCWFRVKTNV 465          
BLAST of CX675231 vs. ExPASy Swiss-Prot
Match: NIA1_PHAVU (Nitrate reductase [NADH] 1 OS=Phaseolus vulgaris GN=NIA1 PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.753e-13
Identity = 50/175 (28.57%), Postives = 83/175 (47.43%), Query Frame = -1
Query:  284 EECQGFFMQKDYKMFPPSVNWDNIN-----WKSRRPLMDFPVQCVICSLEDVNVMKPGK------AKVSGYAVSGGGRGIERVDISVDGGKNWVEAS--RYQKTGIPYIADHMSSDKWAWVFFEV---IIDIPHSTQIVAKAVDTAANVQPESVETIWNLRGVLNTSWHRVQVRV 760
            ++ Q  +  KD K+FP  V+ +  N     +K    + +  +  VI +     ++            + GYA SGGGR + RV++++DGG+ W   S  R +K        +     W W F+ +   ++DI  + +I  +A D A N QPE +  IWN  G++N  W RV+  V
Sbjct:  295 QQSQSHYHYKDNKLFPSHVDAELANEEDWWYKPEYIINEVNINSVITTPSHQEILPINSWTTQMPYSMRGYAYSGGGRKVTRVEVTLDGGETWQVCSVERLEK-------PNKYGKYWCWCFWSLEVEVLDILGAKEIAVRAWDEAQNTQPEKL--IWNTMGMINNCWFRVKTNV 460          
BLAST of CX675231 vs. ExPASy Swiss-Prot
Match: NIA_SOLLC (Nitrate reductase [NADH] OS=Solanum lycopersicum GN=NIA PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.383e-12
Identity = 46/181 (25.41%), Postives = 86/181 (47.51%), Query Frame = -1
Query:  284 ILAEECQGFFMQKDYKMFPPSVNWDNIN-----WKSRRPLMDFPVQCVICS-----LEDVNVMKPGKA-KVSGYAVSGGGRGIERVDISVDGGKNWVEASRYQKTGIPYIADHMSSDK-----WAWVFFEV---IIDIPHSTQIVAKAVDTAANVQPESVETIWNLRGVLNTSWHRVQVRV 769
            +  +E + ++  KD ++ PP V+ +  N     +K    + +  +  VI +     +  +N     +   + GYA SGGG+ + RV++++DGG+ W   +           DH          W W F+ +   ++D+  + +I  +A D   N QPE +  IWN+ G++N  W RV++ V
Sbjct:  313 VTTQESESYYHYKDNRVLPPHVDAELANAEAWWYKPEYIINELNINSVITTPCHEEILPINAWTTQRPYTLRGYAYSGGGKKVTRVEVTLDGGETWSVCT----------LDHPEKPTKYGKYWCWCFWSLEVEVLDLLSAKEIAVRATDETLNTQPEKL--IWNVMGMMNNCWFRVKMNV 481          
The following BLAST results are available for this feature:
BLAST of CX675231 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 29
Match NameE-valueIdentityDescription
SUOX_ARATH1.501e-7575.00Sulfite oxidase OS=Arabidopsis thaliana GN=SOX PE=... [more]
SUOX_MOUSE1.471e-3039.76Sulfite oxidase, mitochondrial OS=Mus musculus GN=... [more]
SUOX_RAT6.179e-2938.55Sulfite oxidase, mitochondrial OS=Rattus norvegicu... [more]
SUOX_CHICK8.070e-2941.03Sulfite oxidase OS=Gallus gallus GN=SUOX PE=1 SV=3[more]
SUOX_MACFA3.067e-2839.76Sulfite oxidase, mitochondrial OS=Macaca fascicula... [more]
SUOX_HUMAN6.832e-2839.16Sulfite oxidase, mitochondrial OS=Homo sapiens GN=... [more]
SUOX_DROME3.074e-2034.91Probable sulfite oxidase, mitochondrial OS=Drosoph... [more]
NIA_LOTJA9.578e-1427.27Nitrate reductase [NADH] OS=Lotus japonicus GN=NIA... [more]
NIA1_PHAVU4.753e-1328.57Nitrate reductase [NADH] 1 OS=Phaseolus vulgaris G... [more]
NIA_SOLLC1.383e-1225.41Nitrate reductase [NADH] OS=Solanum lycopersicum G... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_60G02_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-60G02-M4-1-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX675231 ID=CX675231; Name=CX675231; organism=Citrus sinensis; type=EST; length=772bp
TCTTGGAAGGTGTCAATTTTTTTTCATTAGTCACATCATTGGCCCAGAAA
TGGCAACAGCGCAATAATTCAAAACATGGCCCCGCGAAAATGCAGCACCA
AAAGAAAACGGCCTCATCAAAGAAGTTTCAACAATCCAGTGAACATCATG
ATCAAGCTTAAACACATTATTTTTGTGGACAGCACATCGCGAAGAGCCAA
CTACTTATTACAGTTTGTCAAGAAACTATTCAACTTCTTTATTTTTGCTT
CTATTATGTTTAAGTTTACATATTTGAGTGTCCAACTCGAACCTGAACCC
GGTGCCATGAGGTGTTAAGTACGCCTCTCAAGTTCCAGATGGTTTCCACG
CTTTCAGGTTGGACATTTGCAGCTGTGTCAACCGCTTTGGCAACTATTTG
AGTGCTATGTGGAATATCGATAATGACTTCAAAAAATACCCATGCCCATT
TATCGCTGCTCATGTGATCTGCAATATATGGAATACCAGTCTTCTGGTAT
CTGGAGGCTTCTACCCAGTTTTTGCCACCATCAACAGATATATCTACTCT
CTCAATTCCACGGCCACCTCCTGATACCGCATATCCACTAACTTTTGCCT
TTCCAGGCTTCATCACATTCACGTCCTCTAGTGAGCAAATTACGCACTGG
ACAGGGAAATCCATTAGTGGTCTCCTGGACTTCCAATTAATGTTATCCCA
ATTCACAGATGGTGGAAACATTTTGTAGTCCTTTTGCATAAAGAAGCCCT
GGCATTCCTCTGCAAGGATGTT
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