CK936965
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK936965 vs. ExPASy Swiss-Prot
Match: RNF5_CAEEL (RING finger protein 5 OS=Caenorhabditis elegans GN=rnf-5 PE=1 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 9.870e-21 Identity = 51/108 (47.22%), Postives = 65/108 (60.19%), Query Frame = 1 Query: 307 SPTSAPTNVPEKDGSF-FECNICLDSAQDPVVTLCGHLYCWPCIYKWLHVQTSSLDADEQQQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRPHPSA 627 +P+ PT+ KD S FECNICLD+A+D VV+LCGHL+CWPC+ +W LD Q CPVCK+ I +VP+YGRGG SS K P + S P P + Sbjct: 7 APSEEPTSSSNKDESARFECNICLDAAKDAVVSLCGHLFCWPCLSQW-------LDTRPNNQVCPVCKSAIDGNKVVPIYGRGGDSSDPRKKVPPRPKGQRSEPPPQS 107
BLAST of CK936965 vs. ExPASy Swiss-Prot
Match: RN185_RAT (RING finger protein 185 OS=Rattus norvegicus GN=Rnf185 PE=2 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 9.238e-19 Identity = 48/122 (39.34%), Postives = 67/122 (54.92%), Query Frame = 1 Query: 256 PETGYATEEDASLKQKWSPTSAPTNVPEKDG--SFFECNICLDSAQDPVVTLCGHLYCWPCIYKWLHVQTSSLDADEQQQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRP 615 P +TE ++ P+ + E G S FECNICLD+A+D V++LCGHL+CWPC+++WL + + +Q CPVCKA IS ++PLYGRG +K P RP Sbjct: 6 PSASASTENSSA----GGPSGSSNGTGESGGQDSTFECNICLDTAKDAVISLCGHLFCWPCLHQWLETRPN-------RQVCPVCKAGISRDKVIPLYGRGSTGQQDPREK------TPPRP 110
BLAST of CK936965 vs. ExPASy Swiss-Prot
Match: RN185_PONAB (RING finger protein 185 OS=Pongo abelii GN=RNF185 PE=2 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 1.207e-18 Identity = 45/104 (43.27%), Postives = 61/104 (58.65%), Query Frame = 1 Query: 310 PTSAPTNVPEKDG--SFFECNICLDSAQDPVVTLCGHLYCWPCIYKWLHVQTSSLDADEQQQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRP 615 P+ + E G S FECNICLD+A+D V++LCGHL+CWPC+++WL + + +Q CPVCKA IS ++PLYGRG +K P RP Sbjct: 20 PSGSSNGAGESGGQDSTFECNICLDTAKDAVISLCGHLFCWPCLHQWLETRPN-------RQVCPVCKAGISRDKVIPLYGRGSTGQQDPREK------TPPRP 110
BLAST of CK936965 vs. ExPASy Swiss-Prot
Match: RN185_MOUSE (RING finger protein 185 OS=Mus musculus GN=Rnf185 PE=2 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 1.207e-18 Identity = 45/104 (43.27%), Postives = 61/104 (58.65%), Query Frame = 1 Query: 310 PTSAPTNVPEKDG--SFFECNICLDSAQDPVVTLCGHLYCWPCIYKWLHVQTSSLDADEQQQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRP 615 P+ + E G S FECNICLD+A+D V++LCGHL+CWPC+++WL + + +Q CPVCKA IS ++PLYGRG +K P RP Sbjct: 20 PSGSSNGTGESGGQDSTFECNICLDTAKDAVISLCGHLFCWPCLHQWLETRPN-------RQVCPVCKAGISRDKVIPLYGRGSTGQQDPREK------TPPRP 110
BLAST of CK936965 vs. ExPASy Swiss-Prot
Match: RN185_HUMAN (RING finger protein 185 OS=Homo sapiens GN=RNF185 PE=2 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 1.207e-18 Identity = 45/104 (43.27%), Postives = 61/104 (58.65%), Query Frame = 1 Query: 310 PTSAPTNVPEKDG--SFFECNICLDSAQDPVVTLCGHLYCWPCIYKWLHVQTSSLDADEQQQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRP 615 P+ + E G S FECNICLD+A+D V++LCGHL+CWPC+++WL + + +Q CPVCKA IS ++PLYGRG +K P RP Sbjct: 20 PSGSSNGAGESGGQDSTFECNICLDTAKDAVISLCGHLFCWPCLHQWLETRPN-------RQVCPVCKAGISRDKVIPLYGRGSTGQQDPREK------TPPRP 110
BLAST of CK936965 vs. ExPASy Swiss-Prot
Match: RN185_CHICK (RING finger protein 185 OS=Gallus gallus GN=RNF185 PE=2 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 1.207e-18 Identity = 46/120 (38.33%), Postives = 66/120 (55.00%), Query Frame = 1 Query: 256 PETGYATEEDASLKQKWSPTSAPTNVPEKDGSFFECNICLDSAQDPVVTLCGHLYCWPCIYKWLHVQTSSLDADEQQQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRP 615 P T +T+ ++ S +S + FECNICLD+A+D V++LCGHL+CWPC+++WL + + +Q CPVCKA IS ++PLYGRG +K P RP Sbjct: 6 PTTSASTKSSSTGGTSGSSSSNGAGDNTNQDNTFECNICLDTAKDAVISLCGHLFCWPCLHQWLETRPN-------RQVCPVCKAGISRDKVIPLYGRGSTGQQDPREK------TPPRP 112
BLAST of CK936965 vs. ExPASy Swiss-Prot
Match: RNF5_HUMAN (E3 ubiquitin-protein ligase RNF5 OS=Homo sapiens GN=RNF5 PE=1 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 2.688e-18 Identity = 38/69 (55.07%), Postives = 52/69 (75.36%), Query Frame = 1 Query: 346 GSFFECNICLDSAQDPVVTLCGHLYCWPCIYKWLHVQTSSLDADEQQQNCPVCKANISVASLVPLYGRG 552 G+ FECNICL++A++ VV++CGHLYCWPC+++WL + ++Q CPVCKA IS +VPLYGRG Sbjct: 22 GATFECNICLETAREAVVSVCGHLYCWPCLHQWLETR-------PERQECPVCKAGISREKVVPLYGRG 83
BLAST of CK936965 vs. ExPASy Swiss-Prot
Match: RN185_DANRE (RING finger protein 185 OS=Danio rerio GN=rnf185 PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 5.988e-18 Identity = 41/89 (46.07%), Postives = 56/89 (62.92%), Query Frame = 1 Query: 349 SFFECNICLDSAQDPVVTLCGHLYCWPCIYKWLHVQTSSLDADEQQQNCPVCKANISVASLVPLYGRGGISSASDSKKPNLGEVVPSRP 615 S FECNICLD+++D V++LCGHL+CWPC+++WL + + +Q CPVCKA IS ++PLYGRG +K P RP Sbjct: 37 STFECNICLDTSKDAVISLCGHLFCWPCLHQWLETRPN-------RQVCPVCKAGISRDKVIPLYGRGSTGQQDPREK------TPPRP 112
BLAST of CK936965 vs. ExPASy Swiss-Prot
Match: RNF5_RAT (E3 ubiquitin-protein ligase RNF5 OS=Rattus norvegicus GN=Rnf5 PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.742e-17 Identity = 37/66 (56.06%), Postives = 49/66 (74.24%), Query Frame = 1 Query: 355 FECNICLDSAQDPVVTLCGHLYCWPCIYKWLHVQTSSLDADEQQQNCPVCKANISVASLVPLYGRG 552 FECNICL++A++ VV++CGHLYCWPC+++WL + +Q CPVCKA IS +VPLYGRG Sbjct: 25 FECNICLETAREAVVSVCGHLYCWPCLHQWLETR-------PDRQECPVCKAGISREKVVPLYGRG 83
BLAST of CK936965 vs. ExPASy Swiss-Prot
Match: RNF5_MOUSE (E3 ubiquitin-protein ligase RNF5 OS=Mus musculus GN=Rnf5 PE=1 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.742e-17 Identity = 37/66 (56.06%), Postives = 49/66 (74.24%), Query Frame = 1 Query: 355 FECNICLDSAQDPVVTLCGHLYCWPCIYKWLHVQTSSLDADEQQQNCPVCKANISVASLVPLYGRG 552 FECNICL++A++ VV++CGHLYCWPC+++WL + +Q CPVCKA IS +VPLYGRG Sbjct: 25 FECNICLETAREAVVSVCGHLYCWPCLHQWLETR-------PDRQECPVCKAGISREKVVPLYGRG 83 The following BLAST results are available for this feature:
BLAST of CK936965 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 10
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CK936965 ID=CK936965; Name=CK936965; organism=Citrus sinensis; type=EST; length=870bpback to top |