CX675227

Overview
NameCX675227
Unique NameCX675227
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length446
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX675227 vs. ExPASy Swiss-Prot
Match: MIOX_ORYSJ (Probable inositol oxygenase OS=Oryza sativa subsp. japonica GN=Os06g0561000 PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 6.535e-22
Identity = 46/56 (82.14%), Postives = 50/56 (89.29%), Query Frame = 3
Query:    3 AYKHLMNEEDVENLKWLETFSKYDLYSKSKVRIDVEKVKPYYLSLIEKYFPAKLKW 170
            AY HLMN+ED ENLKWL  F+KYDLYSKS  RIDVEKVKPYY+SLIEKYFPAKL+W
Sbjct:  253 AYMHLMNDEDKENLKWLRVFNKYDLYSKSNERIDVEKVKPYYMSLIEKYFPAKLRW 308          
BLAST of CX675227 vs. ExPASy Swiss-Prot
Match: MIOX1_ARATH (Inositol oxygenase 1 OS=Arabidopsis thaliana GN=MIOX1 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 2.483e-21
Identity = 44/56 (78.57%), Postives = 51/56 (91.07%), Query Frame = 3
Query:    3 AYKHLMNEEDVENLKWLETFSKYDLYSKSKVRIDVEKVKPYYLSLIEKYFPAKLKW 170
            AYKHLMN ED EN+KWL+ F+KYDLYSKSKVR++VE+VKPYYLSL  KYFP+KLKW
Sbjct:  256 AYKHLMNNEDRENMKWLKVFNKYDLYSKSKVRVNVEEVKPYYLSLTNKYFPSKLKW 311          
BLAST of CX675227 vs. ExPASy Swiss-Prot
Match: MIOX4_ARATH (Inositol oxygenase 4 OS=Arabidopsis thaliana GN=MIOX4 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 9.437e-21
Identity = 43/55 (78.18%), Postives = 48/55 (87.27%), Query Frame = 3
Query:    6 YKHLMNEEDVENLKWLETFSKYDLYSKSKVRIDVEKVKPYYLSLIEKYFPAKLKW 170
            Y HLMNEED ENLKWL  F+KYDLYSKSKV +DVEKVKPYY+SLI+KYFP  L+W
Sbjct:  263 YTHLMNEEDKENLKWLHVFNKYDLYSKSKVHVDVEKVKPYYMSLIKKYFPENLRW 317          
BLAST of CX675227 vs. ExPASy Swiss-Prot
Match: MIOX5_ARATH (Inositol oxygenase 5 OS=Arabidopsis thaliana GN=MIOX5 PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 1.233e-20
Identity = 43/56 (76.79%), Postives = 49/56 (87.50%), Query Frame = 3
Query:    3 AYKHLMNEEDVENLKWLETFSKYDLYSKSKVRIDVEKVKPYYLSLIEKYFPAKLKW 170
            AY HLMNEED ENLKWL  F+KYDLYSKSKV ++VEKVKPYY+SLI+KYFP  L+W
Sbjct:  259 AYTHLMNEEDKENLKWLHVFNKYDLYSKSKVHVNVEKVKPYYMSLIKKYFPENLRW 314          
BLAST of CX675227 vs. ExPASy Swiss-Prot
Match: MIOX2_ARATH (Inositol oxygenase 2 OS=Arabidopsis thaliana GN=MIOX2 PE=2 SV=2)

HSP 1 Score: 98.2117 bits (243), Expect = 1.610e-20
Identity = 43/56 (76.79%), Postives = 50/56 (89.29%), Query Frame = 3
Query:    3 AYKHLMNEEDVENLKWLETFSKYDLYSKSKVRIDVEKVKPYYLSLIEKYFPAKLKW 170
            AY HLMN+ED ++LKWL  F+KYDLYSKSKV +DVE+VKPYY+SLI KYFPAKLKW
Sbjct:  262 AYTHLMNDEDRDDLKWLHVFNKYDLYSKSKVLVDVEQVKPYYISLINKYFPAKLKW 317          
BLAST of CX675227 vs. ExPASy Swiss-Prot
Match: MIOX_DICDI (Inositol oxygenase OS=Dictyostelium discoideum GN=miox PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 1.906e-13
Identity = 32/55 (58.18%), Postives = 40/55 (72.73%), Query Frame = 3
Query:    6 YKHLMNEEDVENLKWLETFSKYDLYSKSKVRIDVEKVKPYYLSLIEKYFPAKLKW 170
            Y HL NEED + L W++ F+K+DLYSK    +DVE +KPYY SLI KYFP +L W
Sbjct:  238 YTHLTNEEDEKMLNWVKEFNKFDLYSKDSEPVDVESLKPYYQSLISKYFPNELHW 292          
BLAST of CX675227 vs. ExPASy Swiss-Prot
Match: MIOX_DANRE (Inositol oxygenase OS=Danio rerio GN=miox PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 6.131e-12
Identity = 30/55 (54.55%), Postives = 41/55 (74.55%), Query Frame = 3
Query:    6 YKHLMNEEDVENLKWLETFSKYDLYSKSKVRIDVEKVKPYYLSLIEKYFPAKLKW 170
            Y HL NE+D + L W++ F+K+DLY+KS    DVE++KPYY SLI+KY P  L+W
Sbjct:  224 YMHLCNEKDQQMLPWVKEFNKFDLYTKSTELPDVERLKPYYQSLIDKYCPGVLQW 278          
The following BLAST results are available for this feature:
BLAST of CX675227 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
MIOX_ORYSJ6.535e-2282.14Probable inositol oxygenase OS=Oryza sativa subsp.... [more]
MIOX1_ARATH2.483e-2178.57Inositol oxygenase 1 OS=Arabidopsis thaliana GN=MI... [more]
MIOX4_ARATH9.437e-2178.18Inositol oxygenase 4 OS=Arabidopsis thaliana GN=MI... [more]
MIOX5_ARATH1.233e-2076.79Inositol oxygenase 5 OS=Arabidopsis thaliana GN=MI... [more]
MIOX2_ARATH1.610e-2076.79Inositol oxygenase 2 OS=Arabidopsis thaliana GN=MI... [more]
MIOX_DICDI1.906e-1358.18Inositol oxygenase OS=Dictyostelium discoideum GN=... [more]
MIOX_DANRE6.131e-1254.55Inositol oxygenase OS=Danio rerio GN=miox PE=2 SV=... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS08_60F12_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-60F12-K24-1-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX675227 ID=CX675227; Name=CX675227; organism=Citrus sinensis; type=EST; length=446bp
AAGCATACAAACACTTAATGAACGAGGAGGATGTAGAAAATCTGAAGTGG
CTTGAAACATTCAGCAAATATGACCTTTATAGCAAGAGCAAAGTCCGGAT
AGATGTGGAAAAGGTCAAGCCTTACTATCTCTCCCTCATTGAAAAGTATT
TCCCGGCGAAGCTAAAATGGTGAGACTCGAGAGTTTTCTGAAACTGGCGA
TGGCTCAATATGGGTACTGATGTGGTCAGCAGACAGCGAAGTTAGCTAAT
GAATATGATGATGAATTAGTTTTTGAGAGGTCATCATAGTTGCTTTGTTA
AATGGCTAATCTATCTAGTTTGAAGTTCTTGTAAGAAAAAATAATAATGT
TGCATTTTATGGTTTGTGTAAGATGCATTTGGTATCTGTTTGTTTCTAAT
AAAAGAGTTCTATTTGTTAGTCTCCTGCNNAAAAAAAAAAAAAAAA
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