CK936954
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK936954 vs. ExPASy Swiss-Prot
Match: COL2_ARATH (Zinc finger protein CONSTANS-LIKE 2 OS=Arabidopsis thaliana GN=COL2 PE=1 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 6.003e-33 Identity = 70/113 (61.95%), Postives = 82/113 (72.57%), Query Frame = 3 Query: 9 DLGVVPESTMSDISISHSRPPKGTIDLFSGPPIQMPPQLTPMDREARVLRYXXXXXXXXXXXXIRYASRKAYAETRPRIKGRFAKRTDAEVEVDQMFSATLMTDPGYGIVPSF 347 D+ VVPEST SDI++ H R K TID SGPP Q+ QLTPM+REARVLRY IRYASRKAYAE RPRIKGRFAKR + E E +++FS +LM++ GYGIVPSF Sbjct: 235 DISVVPESTASDITVQHPRTTKETIDQLSGPPTQVVQQLTPMEREARVLRYREKKKTRKFDKTIRYASRKAYAEIRPRIKGRFAKRIETEAEAEEIFSTSLMSETGYGIVPSF 347
BLAST of CK936954 vs. ExPASy Swiss-Prot
Match: COL1_ARATH (Zinc finger protein CONSTANS-LIKE 1 OS=Arabidopsis thaliana GN=COL1 PE=1 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 2.886e-27 Identity = 66/113 (58.41%), Postives = 74/113 (65.49%), Query Frame = 3 Query: 9 DLGVVPESTMSDISISHSRPPKGTIDLFSGPPIQMPPQLTPMDREARVLRYXXXXXXXXXXXXIRYASRKAYAETRPRIKGRFAKRTDAEVEVDQMFSATLMTDPGYGIVPSF 347 DLGVVPEST SD ++S+ R PK D PP QM L+P DREARVLRY IRYASRKAYAE RPRIKGRFAK+ D + E +Q FS + D GYGIVPSF Sbjct: 246 DLGVVPESTTSDATVSNPRSPKAVTDQPPYPPAQM---LSPRDREARVLRYREKKKMRKFEKTIRYASRKAYAEKRPRIKGRFAKKKDVDEEANQAFSTMITFDTGYGIVPSF 355
BLAST of CK936954 vs. ExPASy Swiss-Prot
Match: CONS_ARATH (Zinc finger protein CONSTANS OS=Arabidopsis thaliana GN=CO PE=1 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 1.936e-23 Identity = 64/115 (55.65%), Postives = 74/115 (64.35%), Query Frame = 3 Query: 9 DLGVVPESTMSDISISHSRPPKGTIDLFSGPPIQM--PPQLTPMDREARVLRYXXXXXXXXXXXXIRYASRKAYAETRPRIKGRFAKRTDAEVEVDQMFSATLMTDPGYGIVPSF 347 + GVVPEST + SH R PKGT++ P QM QL+PMDREARVLRY IRYASRKAYAE RPR+ GRFAKR + E E +Q F+ LM + GYGIVPSF Sbjct: 261 ETGVVPESTACVTTASHPRTPKGTVEQQPDPASQMITVTQLSPMDREARVLRYREKRKTRKFEKTIRYASRKAYAEIRPRVNGRFAKR-EIEAE-EQGFNTMLMYNTGYGIVPSF 373
BLAST of CK936954 vs. ExPASy Swiss-Prot
Match: COL4_ARATH (Zinc finger protein CONSTANS-LIKE 4 OS=Arabidopsis thaliana GN=COL4 PE=2 SV=2) HSP 1 Score: 81.2629 bits (199), Expect = 4.322e-15 Identity = 49/114 (42.98%), Postives = 65/114 (57.02%), Query Frame = 3 Query: 9 DLGVVPES-TMSDISISHSRPPKGTIDLFSGPPIQMPPQLTPMDREARVLRYXXXXXXXXXXXXIRYASRKAYAETRPRIKGRFAKRTDAEVEVDQMFSATLMTDPGYGIVPSF 347 ++GVVP+ +++D+S + P D P Q LT +REARV+RY IRYASRKAYAE RPRIKGRFAKRTD D + + + G+G+VP+F Sbjct: 255 EVGVVPDGGSVADVSYPYGGPATSGAD----PGTQRAVPLTSAEREARVMRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAKRTDTNESNDVVGHGGIFS--GFGLVPTF 362
BLAST of CK936954 vs. ExPASy Swiss-Prot
Match: COL5_ARATH (Zinc finger protein CONSTANS-LIKE 5 OS=Arabidopsis thaliana GN=COL5 PE=2 SV=2) HSP 1 Score: 74.7146 bits (182), Expect = 4.046e-13 Identity = 43/79 (54.43%), Postives = 50/79 (63.29%), Query Frame = 3 Query: 120 QLTPMDREARVLRYXXXXXXXXXXXXIRYASRKAYAETRPRIKGRFAKRTDAEVEVDQMFSATLMTDPG---YGIVPSF 347 Q + MDREARVLRY IRYASRKAYAE+RPRIKGRFAKRT E E D +F + + YG+VP+F Sbjct: 279 QASSMDREARVLRYREKRKNRKFEKTIRYASRKAYAESRPRIKGRFAKRT--ETENDDIFLSHVYASAAHAQYGVVPTF 355
BLAST of CK936954 vs. ExPASy Swiss-Prot
Match: COL3_ARATH (Zinc finger protein CONSTANS-LIKE 3 OS=Arabidopsis thaliana GN=COL3 PE=1 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 6.901e-13 Identity = 41/76 (53.95%), Postives = 48/76 (63.16%), Query Frame = 3 Query: 120 QLTPMDREARVLRYXXXXXXXXXXXXIRYASRKAYAETRPRIKGRFAKRTDAEVEVDQMFSATLMTDPGYGIVPSF 347 QL+P +REARVLRY IRYASRKAYAE RPRIKGRFAKRTD+ + + G+G+VPSF Sbjct: 223 QLSPAEREARVLRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAKRTDSR----ENDGGDVGVYGGFGVVPSF 294 The following BLAST results are available for this feature:
BLAST of CK936954 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CK936954 ID=CK936954; Name=CK936954; organism=Citrus sinensis; type=EST; length=608bpback to top |