EL492614

Overview
NameEL492614
Unique NameEL492614
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length210
Libraries
Library NameType
Citrus sinensis flesh cDNA-AFLP Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7789 contig Csv1_Contig7789:741..949. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of EL492614 vs. ExPASy Swiss-Prot
Match: BURPH_ORYSJ (BURP domain-containing protein 17 OS=Oryza sativa subsp. japonica GN=BURP17 PE=2 SV=1)

HSP 1 Score: 59.6918 bits (143), Expect = 2.680e-11
Identity = 21/47 (44.68%), Postives = 33/47 (70.21%), Query Frame = 3 
Query:   54 HMTENINKVFRVSLVGDNGDIADAISACHLDTSQWNPDHLSFQILGI 194
            H+TE   + ++ SLVG +G   +A++ CH DTS WNP+H +F +LG+
Sbjct:  517 HLTEATTRAYKASLVGKDGTAVEAVAVCHTDTSDWNPEHAAFHVLGV 563

HSP 2 Score: 27.7202 bits (60), Expect = 2.680e-11
Identity = 9/15 (60.00%), Postives = 12/15 (80.00%), Query Frame = 2 
Query:    2 VACHYMSYPYAIYGC 46
            +ACH  SYPYA++ C
Sbjct:  502 IACHPESYPYAVFMC 516
The following BLAST results are available for this feature:
BLAST of EL492614 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
BURPH_ORYSJ2.680e-1144.68BURP domain-containing protein 17 OS=Oryza sativa ... [more]
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Properties
Property NameValue
Genbank descriptionC4200 Citrus sinensis flesh cDNA-AFLP Library Citrus sinensis cDNA clone ClC4200, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EL492614 ID=EL492614; Name=EL492614; organism=Citrus sinensis; type=EST; length=210bp
GGTAGCTTGTCATTACATGTCCTATCCTTATGCAATTTACGGCTGCGCAT
AGCCATATGACAGAGAACATCAACAAAGTATTCAGGGTTTCTCTGGTCGG
TGACAATGGAGATATAGCTGACGCTATTTCAGCTTGTCATCTGGATACCT
CTCAGTGGAATCCTGACCATCTATCATTTCAGATACTTGGTATTACTCAG
GACCTCATTC
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