CK936931

Overview
NameCK936931
Unique NameCK936931
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length355
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CK936931 vs. ExPASy Swiss-Prot
Match: P2C58_ARATH (Probable protein phosphatase 2C 58 OS=Arabidopsis thaliana GN=At4g28400 PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 8.067e-13
Identity = 34/43 (79.07%), Postives = 38/43 (88.37%), Query Frame = 2 
Query:    5 TNQEAVDCIKHVKDAKSAAKHLIEHAVSRKSKDDISCIVVKFH 133
            +NQEAVD IK +KD  +AAKHLIE A+SRKSKDDISCIVVKFH
Sbjct:  241 SNQEAVDAIKSIKDPHAAAKHLIEEAISRKSKDDISCIVVKFH 283
[Close]
BLAST of CK936931 vs. ExPASy Swiss-Prot
Match: P2C62_ORYSJ (Probable protein phosphatase 2C 62 OS=Oryza sativa subsp. japonica GN=Os07g0507000 PE=2 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 5.781e-11
Identity = 33/42 (78.57%), Postives = 37/42 (88.10%), Query Frame = 2 
Query:    5 TNQEAVDCIKHVKDAKSAAKHLIEHAVSRKSKDDISCIVVKF 130
            +NQEAVD IK  KDA++AAKHL E AV+RKSKDDISCIVVKF
Sbjct:  247 SNQEAVDEIKDFKDAQAAAKHLTEQAVNRKSKDDISCIVVKF 288
The following BLAST results are available for this feature:
BLAST of CK936931 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
P2C58_ARATH8.067e-1379.07Probable protein phosphatase 2C 58 OS=Arabidopsis ... [more]
P2C62_ORYSJ5.781e-1178.57Probable protein phosphatase 2C 62 OS=Oryza sativa... [more]
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Properties
Property NameValue
Genbank descriptionCGF1004516_D05 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0002_IIIF_D05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK936931 ID=CK936931; Name=CK936931; organism=Citrus sinensis; type=EST; length=355bp
GGGGACAAACCAAGAAGCCGTAGACTGTATCAAACATGTAAAAGATGCTA
AGTCAGCAGCAAAGCACTTGATAGAACACGCAGTTTCTAGGAAAAGTAAG
GATGACATATCTTGCATAGTTGTAAAGTTCCATCGATAAATTTCGTGGTC
TGTCTTTGATGGAGGAAAATTATTAGACGAGATGTCTGTATATTGTGGAT
AAATTTGTTTCTGCGTGGAGATACATGAAATGTGTCACTAAACTGTTGTT
TGCACGATAGAGCATGATGAAATTGATTGCTTGAATTTGAACTTCCAAAA
AAAAAAAAAAAAAAAAAAAAAAAAACAAAAAAAAAAAAAAAAAAAAAAAA
AAAAA
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