CX675220

Overview
NameCX675220
Unique NameCX675220
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length900
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX675220 vs. ExPASy Swiss-Prot
Match: Y5005_ARATH (Probable receptor-like protein kinase At5g20050 OS=Arabidopsis thaliana GN=At5g20050 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.576e-13
Identity = 46/121 (38.02%), Postives = 68/121 (56.20%), Query Frame = 2
Query:    2 YVAPEWFKNVPVSAKVDVYSFGVVLLEIICCRRSVE-MELEEERSAILTDW---AYDCYVEGRLDVLVDNDKAAM--ADKSRVCKWLMTALWCVQEDPLKRPTTKMIVKMLEGYLEVPSPP 346
            Y+APEW     +S K DVYS+G+VLLE+I  RRS+  +E++E +   L  +         E ++  +VD     +   D+  V K +  ALWC+QE   KRP   M+++MLEG + V  PP
Sbjct:  278 YLAPEWLLEHGISEKSDVYSYGIVLLEMIGGRRSISRVEVKETKKKKLEYFPRIVNQKMRERKIMEIVDQRLIEVNEVDEEEVMKLVCVALWCIQEKSKKRPDMTMVIEMLEGRVPVNEPP 398          
BLAST of CX675220 vs. ExPASy Swiss-Prot
Match: Y5343_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53430 OS=Arabidopsis thaliana GN=At1g53430 PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.359e-12
Identity = 44/114 (38.60%), Postives = 57/114 (50.00%), Query Frame = 2
Query:    2 YVAPEWFKNVPVSAKVDVYSFGVVLLEIICCRRSVEMELEEERSAILTDWAYDCYVEGRLDVLVDNDKAAMADKSRVCKWLMTALWCVQEDPLKRPTTKMIVKMLEGYLEVPSP 343
            Y+APE+     ++ K DVYSFGVV LEI+  + +     +EE    L DWAY    +G L  LVD D      K    + L  AL C    P  RP    +V MLEG ++V  P
Sbjct:  837 YMAPEYAMRGYLTDKADVYSFGVVCLEIVSGKSNTNYRPKEE-FVYLLDWAYVLQEQGSLLELVDPDLGTSFSKKEAMRMLNIALLCTNPSPTLRPPMSSVVSMLEGKIKVQPP 949          
BLAST of CX675220 vs. ExPASy Swiss-Prot
Match: Y5900_ARATH (Putative receptor-like protein kinase At5g39000 OS=Arabidopsis thaliana GN=At5g39000 PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 3.027e-12
Identity = 39/111 (35.14%), Postives = 64/111 (57.66%), Query Frame = 2
Query:    2 YVAPEWFKNVPVSAKVDVYSFGVVLLEIICCRRSVEMELEEERSAILTDWAYDCYVEGRLDVLVDNDKAAMADKSRVCKWLMTALWCVQEDPLKRPTTKMIVKMLEGYLEV 334
            Y+ PE+++   ++ K DVYSFGVVLLE++CC R + M+      A L  W    Y  G +D ++D+D +A    + + K+   A+ CVQ+  ++RP    +V  LE  L++
Sbjct:  690 YLDPEYYRRQVLTEKSDVYSFGVVLLEVLCC-RPIRMQSVPPEQADLIRWVKSNYRRGTVDQIIDSDLSADITSTSLEKFCEIAVRCVQDRGMERPPMNDVVWALEFALQL 799          
BLAST of CX675220 vs. ExPASy Swiss-Prot
Match: Y5344_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53440 OS=Arabidopsis thaliana GN=At1g53440 PE=1 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 3.954e-12
Identity = 43/114 (37.72%), Postives = 57/114 (50.00%), Query Frame = 2
Query:    2 YVAPEWFKNVPVSAKVDVYSFGVVLLEIICCRRSVEMELEEERSAILTDWAYDCYVEGRLDVLVDNDKAAMADKSRVCKWLMTALWCVQEDPLKRPTTKMIVKMLEGYLEVPSP 343
            Y+APE+     ++ K DVYSFGVV LEI+  + +     +EE    L DWAY    +G L  LVD D      K    + L  AL C    P  RP    +V ML+G ++V  P
Sbjct:  835 YMAPEYAMRGYLTDKADVYSFGVVCLEIVSGKSNTNYRPKEE-FIYLLDWAYVLQEQGSLLELVDPDLGTSFSKKEAMRMLNIALLCTNPSPTLRPPMSSVVSMLQGKIKVQPP 947          
BLAST of CX675220 vs. ExPASy Swiss-Prot
Match: SERK2_ARATH (Somatic embryogenesis receptor kinase 2 OS=Arabidopsis thaliana GN=SERK2 PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.744e-12
Identity = 36/108 (33.33%), Postives = 62/108 (57.41%), Query Frame = 2
Query:    2 YVAPEWFKNVPVSAKVDVYSFGVVLLEIICCRRSVEM-ELEEERSAILTDWAYDCYVEGRLDVLVDNDKAAMADKSRVCKWLMTALWCVQEDPLKRPTTKMIVKMLEG 322
            ++APE+      S K DV+ +G++LLE+I  +R+ ++  L  +   +L DW      E +L++LVD D  +   ++ V + +  AL C Q  P++RP    +V+MLEG
Sbjct:  474 HIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEMLVDPDLQSNYTEAEVEQLIQVALLCTQSSPMERPKMSEVVRMLEG 581          
BLAST of CX675220 vs. ExPASy Swiss-Prot
Match: CRK43_ARATH (Putative cysteine-rich receptor-like protein kinase 43 OS=Arabidopsis thaliana GN=CRK43 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.744e-12
Identity = 35/119 (29.41%), Postives = 63/119 (52.94%), Query Frame = 2
Query:    2 YVAPEWFKNVPVSAKVDVYSFGVVLLEIICCRRSVEMELEEERSAILTDWAYDCYVEGRLDVLVDNDKAAMADKSRVCKWLMTALWCVQEDPLKRPTTKMIVKMLEGY-LEVPSPPMPP 355
            Y+APE+     +S K+D YSFGV++LEI    R+ +   +     ++T   + C+   +++ ++D D     DK  + + +   L C QE P  RPT   +++M+    + +P+P  PP
Sbjct:  502 YMAPEYISKGRLSNKIDAYSFGVLVLEITSGFRNNKFRSDNSLETLVTQ-VWKCFASNKMEEMIDKDMGEDTDKQEMKRVMQIGLLCTQESPQLRPTMSKVIQMVSSTDIVLPTPTKPP 619          
BLAST of CX675220 vs. ExPASy Swiss-Prot
Match: CRK27_ARATH (Cysteine-rich receptor-like protein kinase 27 OS=Arabidopsis thaliana GN=CRK27 PE=2 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 6.744e-12
Identity = 47/120 (39.17%), Postives = 64/120 (53.33%), Query Frame = 2
Query:    2 YVAPEWFKNVPVSAKVDVYSFGVVLLEIICCRRSVEMELEEERSAILTDWAYDCYVEGRLDVLVDNDKAAMADKSRVCKWLMTALWCVQEDPLKRPTTKMIVKMLEGYLE---VPSPPMP 352
            Y+APE+  +   S K DVYSFGV++LEII  +R+  + L E     L  +A+  ++EG    L+D       DK    + L  AL CVQE+P KRPT   +V ML    E   +P P  P
Sbjct:  501 YMAPEYAMHGRFSVKTDVYSFGVLVLEIITGKRNSGLGLGEGTD--LPTFAWQNWIEGTSMELIDPVLLQTHDKKESMQCLEIALSCVQENPTKRPTMDSVVSMLSSDSESRQLPKPSQP 618          
BLAST of CX675220 vs. ExPASy Swiss-Prot
Match: ANX1_ARATH (Receptor-like protein kinase ANXUR1 OS=Arabidopsis thaliana GN=ANX1 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.150e-11
Identity = 39/111 (35.14%), Postives = 66/111 (59.46%), Query Frame = 2
Query:    2 YVAPEWFKNVPVSAKVDVYSFGVVLLEIICCRRSVEMELEEERSAILTDWAYDCYVEGRLDVLVDNDKAAMADKSRVCKWLMTALWCVQEDPLKRPTTKMIVKMLEGYLEV 334
            Y+ PE+F+   ++ K DVYSFGVVL EI+C R ++   L +E+ + L DWA +C  +G L+ ++D +     +   + K+  TA  C+ +  L+RPT   ++  LE  L++
Sbjct:  684 YLDPEYFRRQQLTEKSDVYSFGVVLFEILCARPALNPSLPKEQVS-LGDWAMNCKRKGNLEDIIDPNLKGKINAECLKKFADTAEKCLNDSGLERPTMGDVLWNLEFALQL 793          
BLAST of CX675220 vs. ExPASy Swiss-Prot
Match: BAK1_ARATH (BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 OS=Arabidopsis thaliana GN=BAK1 PE=1 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 2.563e-11
Identity = 37/108 (34.26%), Postives = 58/108 (53.70%), Query Frame = 2
Query:    2 YVAPEWFKNVPVSAKVDVYSFGVVLLEIICCRRSVEM-ELEEERSAILTDWAYDCYVEGRLDVLVDNDKAAMADKSRVCKWLMTALWCVQEDPLKRPTTKMIVKMLEG 322
            ++APE+      S K DV+ +GV+LLE+I  +R+ ++  L  +   +L DW      E +L+ LVD D         V + +  AL C Q  P++RP    +V+MLEG
Sbjct:  458 HIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEG 565          
BLAST of CX675220 vs. ExPASy Swiss-Prot
Match: ANX2_ARATH (Receptor-like protein kinase ANXUR2 OS=Arabidopsis thaliana GN=ANX2 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.563e-11
Identity = 38/111 (34.23%), Postives = 65/111 (58.56%), Query Frame = 2
Query:    2 YVAPEWFKNVPVSAKVDVYSFGVVLLEIICCRRSVEMELEEERSAILTDWAYDCYVEGRLDVLVDNDKAAMADKSRVCKWLMTALWCVQEDPLKRPTTKMIVKMLEGYLEV 334
            Y+ PE+F+   ++ K DVYSFGVVL E++C R ++   L +E+ + L DWA +C  +G L+ ++D +     +   + K+  TA  C+ +  L RPT   ++  LE  L++
Sbjct:  688 YLDPEYFRRQQLTEKSDVYSFGVVLFEVLCARPALNPSLSKEQVS-LGDWAMNCKRKGTLEDIIDPNLKGKINPECLKKFADTAEKCLSDSGLDRPTMGDVLWNLEFALQL 797          
The following BLAST results are available for this feature:
BLAST of CX675220 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 17
Match NameE-valueIdentityDescription
Y5005_ARATH3.576e-1338.02Probable receptor-like protein kinase At5g20050 OS... [more]
Y5343_ARATH1.359e-1238.60Probable LRR receptor-like serine/threonine-protei... [more]
Y5900_ARATH3.027e-1235.14Putative receptor-like protein kinase At5g39000 OS... [more]
Y5344_ARATH3.954e-1237.72Probable LRR receptor-like serine/threonine-protei... [more]
SERK2_ARATH6.744e-1233.33Somatic embryogenesis receptor kinase 2 OS=Arabido... [more]
CRK43_ARATH6.744e-1229.41Putative cysteine-rich receptor-like protein kinas... [more]
CRK27_ARATH6.744e-1239.17Cysteine-rich receptor-like protein kinase 27 OS=A... [more]
ANX1_ARATH1.150e-1135.14Receptor-like protein kinase ANXUR1 OS=Arabidopsis... [more]
BAK1_ARATH2.563e-1134.26BRASSINOSTEROID INSENSITIVE 1-associated receptor ... [more]
ANX2_ARATH2.563e-1134.23Receptor-like protein kinase ANXUR2 OS=Arabidopsis... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_60F09_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-60F09-K18-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX675220 ID=CX675220; Name=CX675220; organism=Citrus sinensis; type=EST; length=900bp
ATATGTGGCTCCAGAATGGTTCAAGAATGTACCTGTCTCGGCCAAAGTGG
ATGTTTACAGTTTCGGTGTTGTGTTATTGGAAATCATTTGCTGTAGGAGA
AGTGTGGAGATGGAACTGGAGGAAGAAAGAAGTGCAATACTAACAGATTG
GGCTTATGACTGCTATGTTGAAGGAAGACTAGATGTTTTGGTTGACAATG
ATAAAGCAGCTATGGCTGACAAATCAAGGGTGTGTAAATGGTTGATGACA
GCACTGTGGTGCGTTCAAGAAGATCCACTAAAAAGGCCTACAACGAAGAT
GATCGTGAAAATGTTAGAAGGTTATCTGGAAGTTCCTAGTCCCCCAATGC
CCCCACTTCATTCACTGCAGTTAACTGAAAGCTGAAGCCACTAGTAACTA
GCAAGTGCATTTTACTATAATTTTATTTGTAAACGTTTATGGTACATTTG
CTCTGTATCCTAAACCAGTTGGGGGGATTGTTATTAGCTTGTTTAAGTTC
TATATATTGATAGAATTTCAAAAAAGAAAAAAAGGCTATAATAAAAAATG
GAAGTTTCATTTTAAAATCACTTGATGTTTAACCTCAAAGCAATTTTCAG
CTGGAAAAAAAAATAAAAGAAATGAAAAGTGAGAATACATAATTTTAATT
ATTTACCGAGATTGTCACTTTCCCTCTAGTAGAAATCAACTTTTATTACC
TCGTCCTAATGTTTTCATAATGTCATGTCCCATCTAGATATAAAAAGTTA
ACAGAATACTAATTTTTTTTTCTTTCTTTGGATGCACGGCCATGGGATTG
CAAAGTCGAAGGGCAAGAAGAGTTTCAGAGACTAATGGATACCAAAACAT
GCAGGCCAACAAGCTTGCTGTGGAGCCAAAGAAAGATACCAAGGTTGGAG
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