CK936910

Overview
NameCK936910
Unique NameCK936910
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length887
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK936910 vs. ExPASy Swiss-Prot
Match: EIF2A_SCHPO (Eukaryotic translation initiation factor 2A OS=Schizosaccharomyces pombe GN=SPBC4B4.04 PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 2.257e-28
Identity = 69/209 (33.01%), Postives = 121/209 (57.89%), Query Frame = 1
Query:  274 PCTNVRFSEDGSRLMVMKSDSVISIYDCDNFKEIRSFQVPNVAAADLSPCGTYLQTFQK-----SSTPQEKNVILWETETGEALYQLFQKNMTKTTWPSIRFSSDEAVACRMATNEIQFFDTTDFPKGILYRLRVPGVAAFEVSKAPGSHVAVFVPESKGSPASVQIYACGKDLQSQPLARRSFFRCSTVQLNWNRGSTGLLAVAQSDV 885
            P  N  +S +G +L    + + + I D ++  ++      N      SP G YL T+++       TP++ N+ +W TETG+ ++   Q+N  +T W +++++ DE++A R+ TNE+ F++T +  KG + +LRV G++ F +S      VAVF+PE KG+PASV+ Y+      + PL++++FF+   VQ  WN   T LL + Q++V
Sbjct:   36 PARNACYSPNG-KLFAYATATQVVINDTESGAKLTQLPAANTYELGFSPLGKYLSTWERPGKEADGTPKQ-NMKVWNTETGQLVFSFVQRN--QTGW-NLQYTCDESLAARLVTNEVHFYETGNMSKGPIAKLRVEGISDFALSPGQNHAVAVFIPEKKGAPASVRTYSIPN--FNSPLSQKTFFKADKVQFKWNALGTSLLVLTQTEV 237          
BLAST of CK936910 vs. ExPASy Swiss-Prot
Match: EIF2A_CHICK (Eukaryotic translation initiation factor 2A OS=Gallus gallus GN=EIF2A PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.855e-23
Identity = 81/247 (32.79%), Postives = 125/247 (50.61%), Query Frame = 1
Query:  169 ASPSLDILVREPEGFFVWNGPP-FSNGQPIVKLERVPCTNVRFSEDGSRLMVMKSDSVISIYDCDNFKEIRSFQVPNVAAADLSPCGTYLQTFQ-----KSSTPQEKNVILWETETGEALYQLFQKNMTKTTWPSIRFSSDEAVACRMATNEIQFFDTTDFPKGILYRLRVPGVAAFEVSK-APGSHVAVFVPESKGSPASVQIYACGKDLQSQP-LARRSFFRCSTVQLNWNRGSTGLLAVAQSDV 885
            A P+  + VR  EG F+ NGPP F+      +     C  V FS+DGS L    +   ++I +  +   +RSF +P V   + SP    L T+Q     K  T    N+ L++ +TG+ L    QK M    W    ++ DE++  R   NE+ FF+  +F   I  +L +  V  F +S  A  + VAV+VP SKG+P+ V++Y        Q  LA +SFF+   V + WN+ +T +L +A +DV
Sbjct:    2 APPAPLLAVRGSEGLFMVNGPPSFTESAVFQRDSGRNCKAVAFSKDGS-LFAWCNGEKVNIVNVTSAGLLRSFDLPKVVCLEFSPKNNILATWQAYSAAKDGTAGAPNLQLYDVKTGKCLKSFIQKKMQN--WCPC-WADDESICARNVNNEVHFFENNNF-NTIANKLHLQKVNDFVLSPGAQPTKVAVYVPGSKGAPSFVRLYQYPNFGGPQSALANKSFFKADKVTMLWNKKATAVLVIASTDV 243          
BLAST of CK936910 vs. ExPASy Swiss-Prot
Match: EIF2A_MOUSE (Eukaryotic translation initiation factor 2A OS=Mus musculus GN=Eif2a PE=2 SV=2)

HSP 1 Score: 106.686 bits (265), Expect = 1.850e-22
Identity = 82/250 (32.80%), Postives = 126/250 (50.40%), Query Frame = 1
Query:  172 SPSLDIL-VREPEGFFVWNGPP-FSNGQPIVKLERVPCTNVRFSEDGSRLMVMKSDSVISIYDCDNFKEIRSFQVPNVAAADLSPCGTYLQTFQ-----KSSTPQEKNVILWETETGEALYQLFQKNMTKTTW-PSIRFSSDEAVACRMATNEIQFFDTTDFPKGILYRLRVPGVAAFEVSKAPGSH---VAVFVPESKGSPASVQIYACGKDLQSQP-LARRSFFRCSTVQLNWNRGSTGLLAVAQSDV 885
            +PS  +L VR  EG ++ NGPP F+    + +     C    FS+DG+ L    +   ++I +  N   + SF +P     + SP  T L T+Q     K  T    N+ L++ +TG  L    QK M    W PS  +S DE +  R   NE+ FF+  +F   I  +L +  V  F +S  PG+    VAV+VP SKG+P+ V++Y        Q  LA +SFF+   V + WN+ +T +L +A ++V
Sbjct:    2 APSTPLLTVRGSEGLYMVNGPPHFTESTVLPRESGRNCKVYTFSKDGT-LFAWSNGEKVNIINVANKGLLHSFDLPKAVCLEFSPNNTVLATWQPYTTSKDGTAGTPNLQLYDMKTGACLKSFIQKKMQN--WCPS--WSDDEIICARNVNNEVHFFENNNF-NTIANKLHLQKVNDFNLS--PGTQPYKVAVYVPGSKGAPSFVRLYQYPNFAGPQAALANKSFFKADKVTMLWNKKATAVLVIASTEV 243          
BLAST of CK936910 vs. ExPASy Swiss-Prot
Match: EIF2A_DANRE (Eukaryotic translation initiation factor 2A OS=Danio rerio GN=eif2a PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 7.032e-22
Identity = 76/249 (30.52%), Postives = 129/249 (51.81%), Query Frame = 1
Query:  169 ASPSLDILVREPEGFFVWNGPPFSNGQPIVKLERVPCTNVRFSEDGSRLMVMKSDSVISIYDCDNFKEIRSFQVPNVAAADLSPCGTYLQTFQKSSTPQ-----EKNVILWETETGEALYQLFQKNMTKTTW-PSIRFSSDEAVACRMATNEIQFFDTTDFPKGILYRLRVPGVAAFEVSKAPGSH---VAVFVPESKGSPASVQIYACGK-DLQSQPLARRSFFRCSTVQLNWNRGSTGLLAVAQSDV 885
            A P+  + VR  +G  + +GPP        + +      + FS DG+ L    + S +++    +   ++SF +P   A + SP    L T+Q+ +  Q     E N+ LW+ +TG  +   +QK MT   W PS  ++ DE+++ R   NE+ FF+  +F + I  +L +  V+ F +S  PGS    VAV+VP SKG+P+ V++Y        +  LA +SFF+   V + WN+ +T +L  A ++V
Sbjct:    2 APPTPHLAVRGSDGTLLLHGPPNCQESSAFQRDDRQGRYMTFSNDGT-LFAWCNGSQVTVLKVPSGDLVKSFDLPKTTALEFSPLNKVLATWQQYTKTQDNPQGEANLQLWDLQTGACMKAFYQKKMTG--WCPS--WADDESISVRNVNNELHFFENNNF-ETIANKLHLQKVSEFALS--PGSQPSKVAVYVPGSKGAPSFVRLYQYPNFGGPTCALANKSFFKADKVNMLWNKKATAVLVTASTEV 242          
BLAST of CK936910 vs. ExPASy Swiss-Prot
Match: EIF2A_HUMAN (Eukaryotic translation initiation factor 2A OS=Homo sapiens GN=EIF2A PE=1 SV=3)

HSP 1 Score: 101.293 bits (251), Expect = 7.774e-21
Identity = 78/248 (31.45%), Postives = 123/248 (49.60%), Query Frame = 1
Query:  172 SPSLDIL-VREPEGFFVWNGPP-FSNGQPIVKLERVPCTNVRFSEDGSRLMVMKSDSVISIYDCDNFKEIRSFQVPNVAAADLSPCGTYLQTFQKSSTPQE-----KNVILWETETGEALYQLFQKNMTKTTW-PSIRFSSDEAVACRMATNEIQFFDTTDFPKGILYRLRVPGVAAFEVSKAPGSH-VAVFVPESKGSPASVQIYACGKDLQSQP-LARRSFFRCSTVQLNWNRGSTGLLAVAQSDV 885
            +PS  +L VR  EG ++ NGPP F+      +     C    FS+DG+ L    +   ++I    N   + SF +      + SP  T L T+Q  +T ++      N+ L++ +TG  L    QK M    W PS  +S DE +  R   NE+ FF+  +F   I  +L +  +  F +S  P  + VAV+VP SKG+P+ V++Y           LA +SFF+   V + WN+ +T +L +A +DV
Sbjct:    2 APSTPLLTVRGSEGLYMVNGPPHFTESTVFPRESGKNCKVCIFSKDGT-LFAWGNGEKVNIISVTNKGLLHSFDLLKAVCLEFSPKNTVLATWQPYTTSKDGTAGIPNLQLYDVKTGTCLKSFIQKKMQN--WCPS--WSEDETLCARNVNNEVHFFENNNF-NTIANKLHLQKINDFVLSPGPQPYKVAVYVPGSKGAPSFVRLYQYPNFAGPHAALANKSFFKADKVTMLWNKKATAVLVIASTDV 243          
BLAST of CK936910 vs. ExPASy Swiss-Prot
Match: EIF2A_XENLA (Eukaryotic translation initiation factor 2A OS=Xenopus laevis GN=eif2a PE=2 SV=2)

HSP 1 Score: 100.523 bits (249), Expect = 1.326e-20
Identity = 79/251 (31.47%), Postives = 129/251 (51.39%), Query Frame = 1
Query:  172 SPSLDIL-VREPEGFFVWNGPP-FSNGQPIVKLERVPCTNVRFSEDGSRLMVMKSDSVISIYDCDNFKEIRSFQVPNVAAADLSPCGTYLQTFQ-----KSSTPQEKNVILWETETGEA--LYQLFQKNMTKTTWPSIRFSSDEAVACRMATNEIQFFDTTDFPKGILYRLRVPGVAAFEVSKAPGSH---VAVFVPESKGSPASVQIYACGK-DLQSQPLARRSFFRCSTVQLNWNRGSTGLLAVAQSDV 885
            +P + +L VR  +G  +  GPP F++ +   +     C   RF++DG +L    +  VI+I +C + K + +  +P V + + SP  T L T+Q     K  T    N+ L++ ++G+   +    QK M    W S  +S DE +  R   NE+ FF+  +F   I  +L +  V+ FE+S  PG     VAV+VP SKG+P+ V++Y        +  LA +SFF+   V + WN  +T +L  A +DV
Sbjct:    2 APPMPLLSVRGSDGIQLVLGPPKFTDSETFQRDPSKNCKVSRFTKDG-KLFGWCNGEVINIVNCSDSKLLHTLDLPKVVSLEFSPKNTILATWQTYTTGKDGTAGTPNLQLYDLKSGKISNVKSFIQKKMEN--W-SPHWSDDENICARNVNNEVHFFENNNFDT-IANKLHLQKVSDFELS--PGEQPCKVAVYVPGSKGAPSFVRLYQYPNFSGPNSALANKSFFKADRVAMLWNSKATAVLVTASTDV 245          
BLAST of CK936910 vs. ExPASy Swiss-Prot
Match: EIF2A_DICDI (Eukaryotic translation initiation factor 2A OS=Dictyostelium discoideum GN=eif2a PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.241e-18
Identity = 59/243 (24.28%), Postives = 116/243 (47.74%), Query Frame = 1
Query:  172 SPSLDILVREPEGFFVWNGPPFSNGQPIVKLERVPCTNVRFSEDGSRLMVMKSDSVISIYDCDNFKEIRSFQVPNVAAADLSPCGTYLQTFQKSS--TPQEKNVILWETETGEALYQLFQKNMTKTTWPSIRFSSDEAVACRMATNEIQFFDTTDFPKGIL-YRLRVPGVAAFEVSKAPGS---HVAVFVPESKGSPASVQIYACGKDLQSQPLARRSFFRCSTVQLNWNRGSTGLLAVAQSD 882
            +P L  +VR     +   G  +     +       C +V +S+DG+ +  +  + ++ I + D          PNV     SP  ++L T+++ S     E N+I+W+ +    LY+  QK   +  WP I+++ DE +A ++ +NE+ FF+      G+L  ++++  +++FE + A       +A FVPE   +P S +IY+      ++  +   FF+ S  ++ WN+    +L    +D
Sbjct:   46 TPKLQFVVRSKTNAYQEIGQQYGKNLNLPSYSNGDCRHVEYSKDGTLIAYVNLNEIV-ICNSDGGSVHSVINRPNVGMISFSPQNSFLLTWERMSEYNNNENNLIVWDIKQASILYKTSQKYCNQENWPLIKWTDDEVLAGKLISNEVHFFNGRSI--GVLAKKIKLQDISSFEFAPATNGGPYKIATFVPEKGSTPGSARIYS--YPTVNEYCSHLKFFKASEAKVLWNKKGNAILVHTFTD 283          
BLAST of CK936910 vs. ExPASy Swiss-Prot
Match: EIF3B_ANOGA (Eukaryotic translation initiation factor 3 subunit B OS=Anopheles gambiae GN=eIF3-S9 PE=3 SV=3)

HSP 1 Score: 74.3294 bits (181), Expect = 1.018e-12
Identity = 52/206 (25.24%), Postives = 96/206 (46.60%), Query Frame = 1
Query:  241 NGQP----IVKLERVPCTNVRFSEDGSRLMVMKSDSVISIYDCDNFKEIRSFQVPNVAAADLSPCGTYLQTFQKSSTPQEKNVILWETETGEALYQLFQKNMTKTTWPSIRFSSDEAVACRMATNEIQFFDTTDFPKGILYRLRVPGVAAFEVSKAPGSHVAVFVPESKGSPASVQIYACGKDLQSQPLARRSFFRCSTVQLNWNR 846
            N QP    ++K ER   T V++S  G+ ++      V+ ++   +F ++  F   N    D+SPC  YL T+     P  + +++W+  TG          M+  +   +R+S D+    R+  ++IQ +DTT F    +  +RV G+  F  S    + +A +V E    PA V + A  K  +   L  ++ F  +  +++W +
Sbjct:  189 NTQPEPTELLKRERFTDTYVKWSPKGTYIVTFHKQGVV-VWGGSSFVKVNKFAHSNAQFVDISPCEQYLVTY----GPNGQKIVIWDIRTGAEKRTFVSDGMSNAS--MLRWSHDDRYVARLVDSQIQIYDTTTFFLLDMKSIRVEGIRNFSWSPT-DNIIAYWVAEEVDVPAKVTLMAIPKKTE---LRTKNLFNVADCKIHWQK 383          
BLAST of CK936910 vs. ExPASy Swiss-Prot
Match: EIF3B_DROAN (Eukaryotic translation initiation factor 3 subunit B OS=Drosophila ananassae GN=eIF3-S9 PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.597e-12
Identity = 50/194 (25.77%), Postives = 88/194 (45.36%), Query Frame = 1
Query:  265 ERVPCTNVRFSEDGSRLMVMKSDSVISIYDCDNFKEIRSFQVPNVAAADLSPCGTYLQTFQKSSTPQEKNVILWETETGEALYQLFQKNMTKTTWPSIRFSSDEAVACRMATNEIQFFDTTDFPKGILYRLRVPGVAAFEVSKAPGSHVAVFVPESKGSPASVQIYACGKDLQSQPLARRSFFRCSTVQLNWNR 846
            ER   T V++S  G+ ++      V +I+   NF++I+ F  P     + SPC  YL T+    TP  + +I+W+  TG          M+  +    R+S D+    RM  N I  ++T  F    L  +++PG+  F  S    + +A +V E    PA V +    K    + +  ++ F  +  +L+W +
Sbjct:  205 ERFTDTFVKWSPLGTYVVTFHKPGV-AIWGGSNFQKIQKFPHPGTQFVEFSPCENYLVTY--GPTPTGQKIIIWDIRTGAEKRSFVADGMSVLS--MFRWSHDDKFVARMGENSIHIYETPSFYLLDLKSIKIPGIRGFSWSPT-DNVIAYWVEEQNQIPARVTLMEIPK---KREIRNKNLFHVADCKLHWQK 389          
BLAST of CK936910 vs. ExPASy Swiss-Prot
Match: EIF3B_DROWI (Eukaryotic translation initiation factor 3 subunit B OS=Drosophila willistoni GN=eIF3-S9 PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.276e-11
Identity = 49/194 (25.26%), Postives = 87/194 (44.85%), Query Frame = 1
Query:  265 ERVPCTNVRFSEDGSRLMVMKSDSVISIYDCDNFKEIRSFQVPNVAAADLSPCGTYLQTFQKSSTPQEKNVILWETETGEALYQLFQKNMTKTTWPSIRFSSDEAVACRMATNEIQFFDTTDFPKGILYRLRVPGVAAFEVSKAPGSHVAVFVPESKGSPASVQIYACGKDLQSQPLARRSFFRCSTVQLNWNR 846
            ER   T V++S  G+ ++      V +I+   NF++I+ F        + SPC  YL T+    TP  + +I+W+  TG          M+  +    R+S D+    RM  N I  ++T  F    L  +++PG+  F  S    + +A +V E    PA V +    K    + +  ++ F  +  +L+W +
Sbjct:  209 ERFTDTFVKWSPLGTYVVTFHKPGV-AIWGGSNFQKIQKFPHTGTQFVEFSPCENYLVTY--GPTPTGQKIIIWDIRTGSEKRSFVADGMSVLS--MFRWSHDDKFVARMGENSIHIYETPSFYLLDLKSIKIPGIRGFSWSPT-DNVIAYWVEEQNQIPARVTLMEIPK---KREIRNKNLFHVADCKLHWQK 393          
The following BLAST results are available for this feature:
BLAST of CK936910 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
EIF2A_SCHPO2.257e-2833.01Eukaryotic translation initiation factor 2A OS=Sch... [more]
EIF2A_CHICK2.855e-2332.79Eukaryotic translation initiation factor 2A OS=Gal... [more]
EIF2A_MOUSE1.850e-2232.80Eukaryotic translation initiation factor 2A OS=Mus... [more]
EIF2A_DANRE7.032e-2230.52Eukaryotic translation initiation factor 2A OS=Dan... [more]
EIF2A_HUMAN7.774e-2131.45Eukaryotic translation initiation factor 2A OS=Hom... [more]
EIF2A_XENLA1.326e-2031.47Eukaryotic translation initiation factor 2A OS=Xen... [more]
EIF2A_DICDI1.241e-1824.28Eukaryotic translation initiation factor 2A OS=Dic... [more]
EIF3B_ANOGA1.018e-1225.24Eukaryotic translation initiation factor 3 subunit... [more]
EIF3B_DROAN6.597e-1225.77Eukaryotic translation initiation factor 3 subunit... [more]
EIF3B_DROWI4.276e-1125.26Eukaryotic translation initiation factor 3 subunit... [more]
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Properties
Property NameValue
Genbank descriptionCGF1004516_F01 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0002_IIIF_F01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK936910 ID=CK936910; Name=CK936910; organism=Citrus sinensis; type=EST; length=887bp
GGGGAGACACTCTGTATCTGATTCTCAAATCATTTTCCACCGCCAAAATC
TCACTCCCCGGCAGCTGAAACCTCTCCGATTACAGTTTCCAGCTCCGTTG
CACCGTCAACAATTGAGTAGCATCTCTTTTGCATACACGTGTGTTCGCCT
CCAATGGCGTCAGAGGATGCTTCACCGTCTTTGGACATTTTAGTTCGAGA
GCCAGAGGGTTTCTTTGTCTGGAATGGGCCTCCATTTAGCAACGGACAAC
CTATTGTCAAGCTTGAAAGAGTTCCATGCACCAATGTGAGGTTCAGCGAG
GATGGGTCCAGACTCATGGTCATGAAATCTGACTCGGTTATTAGCATATA
CGACTGTGATAACTTTAAAGAGATAAGGTCATTTCAAGTTCCCAATGTTG
CTGCTGCTGACTTGTCTCCGTGTGGGACTTATCTTCAGACATTTCAGAAA
TCCTCAACACCACAGGAAAAGAATGTGATCCTTTGGGAGACGGAGACTGG
TGAAGCTCTTTATCAGCTATTCCAGAAGAATATGACGAAAACCACATGGC
CGTCAATCAGATTTAGTTCAGATGAAGCTGTTGCATGTCGTATGGCAACA
AACGAAATACAATTTTTTGATACTACGGATTTTCCTAAAGGAATCTTATA
TCGGTTAAGAGTTCCTGGGGTGGCTGCTTTTGAGGTTTCTAAGGCACCTG
GTTCTCATGTGGCGGTATTTGTTCCAGAATCTAAGGGGAGTCCTGCCAGT
GTCCAGATATATGCTTGTGGAAAAGATTTGCAAAGTCAACCTCTTGCTCG
AAGGAGCTTTTTCCGTTGTTCTACTGTGCAACTGAATTGGAATCGTGGTT
CCACTGGGCTTCTAGCTGTGGCGCAGTCAGATGTAGA
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