CK936908

Overview
NameCK936908
Unique NameCK936908
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length836
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8323 contig Csv1_Contig8323:67..903. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK936908 vs. ExPASy Swiss-Prot
Match: GSTX4_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 333.569 bits (854), Expect = 8.511e-91
Identity = 153/216 (70.83%), Postives = 178/216 (82.41%), Query Frame = 3
Query:    6 DEVVLLDFWPSMFGIRVRIALAEKGVKYEYKEEDLKNKSPLLLQMNPVHKKIPVLIHNGRPVCESPIIVQYIDEVWKDKAP-LLPSDPYQRAQARFWVDFIDKKMYDSSRKTWTTKGXXXXXXXXXXXXVLKTLEGQLGDKPFFGGDNFGYVDLSLIPFYCWFYTYETCGKFSVEAECPKFIAWVKRCLQRETVAKALPDGKKVFEFVSVMRTNLG 650
            +EV+LLDFWPSMFG+R+RIALAEK +KYEYKEEDL+NKSPLLLQMNP+HKKIPVLIHNG+P+CES I V+YI+EVWKDKAP LLPSDPY RAQARFW D+IDKK+YD  RK WTTKG             LK LEG LGDKP+FGG++FG+VD++LI +Y WFY YET G FS EAECPKF+AW KRC+QRE+VAK+LPD  KV EFV V+R   G
Sbjct:    4 EEVILLDFWPSMFGMRLRIALAEKEIKYEYKEEDLRNKSPLLLQMNPIHKKIPVLIHNGKPICESIIAVEYIEEVWKDKAPNLLPSDPYDRAQARFWADYIDKKLYDFGRKLWTTKGEEQEAAKKDFIECLKVLEGALGDKPYFGGESFGFVDIALIGYYSWFYAYETFGNFSTEAECPKFVAWAKRCMQRESVAKSLPDQPKVLEFVKVLRQKFG 219          
BLAST of CK936908 vs. ExPASy Swiss-Prot
Match: GSTXC_TOBAC (Probable glutathione S-transferase parC OS=Nicotiana tabacum GN=PARC PE=2 SV=1)

HSP 1 Score: 330.487 bits (846), Expect = 7.205e-90
Identity = 151/216 (69.91%), Postives = 177/216 (81.94%), Query Frame = 3
Query:    6 DEVVLLDFWPSMFGIRVRIALAEKGVKYEYKEEDLKNKSPLLLQMNPVHKKIPVLIHNGRPVCESPIIVQYIDEVWKDKAP-LLPSDPYQRAQARFWVDFIDKKMYDSSRKTWTTKGXXXXXXXXXXXXVLKTLEGQLGDKPFFGGDNFGYVDLSLIPFYCWFYTYETCGKFSVEAECPKFIAWVKRCLQRETVAKALPDGKKVFEFVSVMRTNLG 650
            +EV+LLDFWPSMFG+R+RIALAEK +KYEYK+EDL+NKSPLLLQMNP+HKKIPVLIHNG+P+CES I V+YI+EVWKDKAP LLPSDPY RAQARFW D+IDKK+YD  RK W TKG             LK LEG LGD+P+FGG++FG+VD++LI FY WFY YET G FS EAECPKF+AW KRC+QRE+VAK+LPD  KV EFV V+R   G
Sbjct:    4 EEVILLDFWPSMFGMRLRIALAEKEIKYEYKQEDLRNKSPLLLQMNPIHKKIPVLIHNGKPICESIIAVEYIEEVWKDKAPSLLPSDPYDRAQARFWADYIDKKLYDFGRKLWATKGEEQEAAKKDFIECLKVLEGALGDRPYFGGESFGFVDIALIGFYSWFYAYETFGNFSTEAECPKFVAWAKRCMQRESVAKSLPDQPKVLEFVKVLRQKFG 219          
BLAST of CK936908 vs. ExPASy Swiss-Prot
Match: GSTX3_SOYBN (Glutathione S-transferase 3 OS=Glycine max GN=GST3 PE=1 SV=1)

HSP 1 Score: 305.064 bits (780), Expect = 3.242e-82
Identity = 139/214 (64.95%), Postives = 168/214 (78.50%), Query Frame = 3
Query:    6 DEVVLLDFWPSMFGIRVRIALAEKGVKYEYKEEDLKNKSPLLLQMNPVHKKIPVLIHNGRPVCESPIIVQYIDEVWKDKAPLLPSDPYQRAQARFWVDFIDKKMYDSSRKTWTTKGXXXXXXXXXXXXVLKTLEGQLGDKPFFGGDNFGYVDLSLIPFYCWFYTYETCGKFSVEAECPKFIAWVKRCLQRETVAKALPDGKKVFEFVSVMRTNL 647
            DEVVLLD W SM+G+R RIALAEKGV+YEYKEE+L N+SPLLLQMNP+HKKIPVLIHNG+P+CES IIVQYIDEVW DK+PL+PSDPY+R+QARFWVD+IDKK+YD+ +K W +KG            + K LE  L DKPF+G D FG+VDL LI F  WFYTYET G F +E ECPK +AWVKRC++RETV+  LPD KKV+  +  ++  L
Sbjct:    3 DEVVLLDTWASMYGMRARIALAEKGVRYEYKEENLMNRSPLLLQMNPIHKKIPVLIHNGKPICESAIIVQYIDEVWNDKSPLMPSDPYKRSQARFWVDYIDKKIYDTWKKMWLSKGEEHEEGKKELISIFKQLEETLTDKPFYGDDTFGFVDLCLITFSSWFYTYETYGNFKMEEECPKLMAWVKRCMERETVSNTLPDAKKVYGLIVELQKTL 216          
BLAST of CK936908 vs. ExPASy Swiss-Prot
Match: GSTXA_TOBAC (Probable glutathione S-transferase parA OS=Nicotiana tabacum GN=PARA PE=2 SV=1)

HSP 1 Score: 294.278 bits (752), Expect = 5.722e-79
Identity = 129/215 (60.00%), Postives = 168/215 (78.14%), Query Frame = 3
Query:    6 DEVVLLDFWPSMFGIRVRIALAEKGVKYEYKEEDLKNKSPLLLQMNPVHKKIPVLIHNGRPVCESPIIVQYIDEVWKDKAPLLPSDPYQRAQARFWVDFIDKKMYDSSRKTWTTKGXXXXXXXXXXXXVLKTLEGQLGDKPFFGGDNFGYVDLSLIPFYCWFYTYETCGKFSVEAECPKFIAWVKRCLQRETVAKALPDGKKVFEFVSVMRTNLG 650
            + VVLLDFWPS FG+R+RIALA KG+KYE KEE+L +KSPLLL+MNPVHKKIP+LIHN + +CES  I++YIDEVW DK PLLPSDPY+R+QARFW D+IDKK+Y + R+ W+ KG            +LKTLEG+LG+K +FGGDN G+VD++L+PF  WFY+YETC  FS+EAECPK + W K C++ E+V+K+LP   K++ FV  ++  LG
Sbjct:    4 NNVVLLDFWPSSFGMRLRIALALKGIKYEAKEENLSDKSPLLLEMNPVHKKIPILIHNSKAICESLNILEYIDEVWHDKCPLLPSDPYERSQARFWADYIDKKIYSTGRRVWSGKGEDQEEAKKEFIEILKTLEGELGNKTYFGGDNLGFVDVALVPFTSWFYSYETCANFSIEAECPKLVVWAKTCMESESVSKSLPHPHKIYGFVLELKHKLG 218          
BLAST of CK936908 vs. ExPASy Swiss-Prot
Match: GSTX1_NICPL (Probable glutathione S-transferase MSR-1 OS=Nicotiana plumbaginifolia GN=MSR-1 PE=2 SV=1)

HSP 1 Score: 276.944 bits (707), Expect = 9.454e-74
Identity = 124/215 (57.67%), Postives = 165/215 (76.74%), Query Frame = 3
Query:    6 DEVVLLDFWPSMFGIRVRIALAEKGVKYEYKEEDLKNKSPLLLQMNPVHKKIPVLIHNGRPVCESPIIVQYIDEVWKDKAPLLPSDPYQRAQARFWVDFIDKKMYDSSRKTWTTKGXXXXXXXXXXXXVLKTLEGQLGDKPFFGGDNFGYVDLSLIPFYCWFYTYETCGKFSVEAECPKFIAWVKRCLQRETVAKALPDGKKVFEFVSVMRTNLG 650
            + VVLLDF  S FG+R+RIALA KG+KYE KEE+L +KSPLLL+MNPVHKKIP+LIHNG+P+CES  I++YIDEVW +K PLLPSDPYQR+QARFW ++ID K+Y + R+ W+ KG            + KTLEG+LG+K +FGGDN G+VD++L+PF  WFY+YETC  FS+EAEC K + W + C++ E V+K+LP   K+++FV  ++  LG
Sbjct:    4 NNVVLLDFSGSSFGMRLRIALALKGIKYEAKEENLSDKSPLLLEMNPVHKKIPILIHNGKPICESLNILEYIDEVWHEKCPLLPSDPYQRSQARFWANYIDNKIYSTGRRVWSGKGEDQEEAKKEFIEIFKTLEGELGNKTYFGGDNLGFVDVALVPFTSWFYSYETCANFSIEAECRKLVVW-QNCMENERVSKSLPHPHKIYDFVLELKHKLG 217          
BLAST of CK936908 vs. ExPASy Swiss-Prot
Match: GSTU1_ORYSJ (Probable glutathione S-transferase GSTU1 OS=Oryza sativa subsp. japonica GN=GSTU1 PE=1 SV=1)

HSP 1 Score: 231.106 bits (588), Expect = 5.949e-60
Identity = 111/224 (49.55%), Postives = 149/224 (66.52%), Query Frame = 3
Query:    9 EVVLLDFWPSMFGIRVRIALAEKGVKYEYKEEDLKNKSPLLLQMNPVHKKIPVLIHNGRPVCESPIIVQYIDEVWKDKAPLLP-------SDPYQRAQARFWVDFIDKKMYDSSRKTWTTKGXXXXXXXXXXXXVLKTLEGQLGDKPFF---GGDNFGYVDLSLIPFYCWFYTYETCGKFSVEAECPKFIAWVKRCLQRETVAKALPDGKKVFEFVSVMRTNLG 650
            E+VLLDFW S FG R RIA+AEKG+++EY+EEDL NKS LLL+ NPVH+KIPVL+H GRPV ES +I+QY+D+ +     LLP          Y RA ARFW D++D+K+YD   + W  KG            +L+TLE +LGD+ FF   GG   G+VD++L+PF  WFY+YE CG FSVE   P+  AW +RC + ++V K LP  +KV++FV V++   G
Sbjct:    6 ELVLLDFWVSPFGQRCRIAMAEKGLEFEYREEDLGNKSDLLLRSNPVHRKIPVLLHAGRPVSESLVILQYLDDAFPGTPHLLPPANSGDADAAYARATARFWADYVDRKLYDCGSRLWRLKGEPQAAAGREMAEILRTLEAELGDREFFGGGGGGRLGFVDVALVPFTAWFYSYERCGGFSVEEVAPRLAAWARRCGRIDSVVKHLPSPEKVYDFVGVLKKKYG 229          
BLAST of CK936908 vs. ExPASy Swiss-Prot
Match: GSTU1_ORYSI (Probable glutathione S-transferase GSTU1 OS=Oryza sativa subsp. indica GN=GSTU1 PE=2 SV=1)

HSP 1 Score: 229.95 bits (585), Expect = 1.325e-59
Identity = 112/224 (50.00%), Postives = 152/224 (67.86%), Query Frame = 3
Query:    9 EVVLLDFWPSMFGIRVRIALAEKGVKYEYKEEDLKNKSPLLLQMNPVHKKIPVLIHNGRPVCESPIIVQYIDEVWKDKAPLL-PSD------PYQRAQARFWVDFIDKKMYDSSRKTWTTKGXXXXXXXXXXXXVLKTLEGQLGDKPFF---GGDNFGYVDLSLIPFYCWFYTYETCGKFSVEAECPKFIAWVKRCLQRETVAKALPDGKKVFEFVSVMRTNLG 650
            E+VLLDFW S FG R RIA+AEKG+++EY+EEDL NKS LLL+ NPVH+KIPVL+H GRPV ES +I+QY+D+ +     LL P++       Y RA ARFW D++D+K+YD   + W  KG            +L+TLE +LGD+ FF   GG   G+VD++L+PF  WFY+YE CG FSVE   P+  AW +RC + ++VAK LP  +KV++FV V++   G
Sbjct:    6 ELVLLDFWVSPFGQRCRIAMAEKGLEFEYREEDLGNKSDLLLRSNPVHRKIPVLLHAGRPVSESLVILQYLDDAFPGTPHLLSPANSGDADAAYARATARFWADYVDRKLYDCGSRLWRLKGEPQAAAGREMAEILRTLEAELGDREFFGGGGGGRLGFVDVALVPFTAWFYSYERCGGFSVEEVAPRLAAWARRCGRIDSVAKHLPSPEKVYDFVGVLKKKYG 229          
BLAST of CK936908 vs. ExPASy Swiss-Prot
Match: GSTX2_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 8.359e-38
Identity = 92/207 (44.44%), Postives = 120/207 (57.97%), Query Frame = 3
Query:    9 EVVLLDFWPSMFGIRVRIALAEKGVKYEYKEEDLKNKSPLLLQMNPVHKKIPVLIHNGRPVCESPIIVQYIDEVWKDKAPLLPSDPYQRAQARFWVDFIDKKMYDSSRKTWTTKGXXXXXXXXXXXXVLKTLEGQLGDKPFFGGDNFGYVDLSLIPFYCWFYTYET-CGKFSVEAE-CPKFIAWVKRCLQRETVAKALPDGKKVFEF 623
            EV LL FW S F  RV  AL  KGVKYEY EED  NKS LLLQ NPV+KK+PVLIHNG+P+ ES II++YIDE ++  + +LP DPY RA ARFW  F+D K+  +   T+  KG            +LK L+ +L DK FF GD FG+ D++      W   +E   G   V++E  P F  W    +    V ++LP   ++  F
Sbjct:    3 EVKLLGFWYSPFSHRVEWALKIKGVKYEYIEEDRDNKSSLLLQSNPVYKKVPVLIHNGKPIVESMIILEYIDETFEGPS-ILPKDPYDRALARFWAKFLDDKV-AAVVNTFFRKGEEQEKGKEEVYEMLKVLDNELKDKKFFAGDKFGFADIAANLVGFWLGVFEEGYGDVLVKSEKFPNFSKWRDEYINCSQVNESLPPRDELLAF 207          
BLAST of CK936908 vs. ExPASy Swiss-Prot
Match: GSTX1_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 1.092e-37
Identity = 91/208 (43.75%), Postives = 122/208 (58.65%), Query Frame = 3
Query:    9 EVVLLDFWPSMFGIRVRIALAEKGVKYEYKEEDLKNKSPLLLQMNPVHKKIPVLIHNGRPVCESPIIVQYIDEVWKDKAPLLPSDPYQRAQARFWVDFIDKKMYDSSRKTWTTKGXXXXXXXXXXXXVLKTLEGQLGDKPFFGGDNFGYVDL--SLIPFYCWFYTYETCGKFSVEAE-CPKFIAWVKRCLQRETVAKALPDGKKVFEF 623
            EV LL FW S F  RV  AL  KGVKYEY EED  NKS LLLQ NP+HKK+PVLIHNG+ + ES +I++YIDE ++  + +LP DPY RA ARFW  F+D K+  +  KT+  KG            +LK L+ +L DK FF GD FG+ D+  +L+ F+   +  E  G   V +E  P F  W    +    + ++LP   ++  F
Sbjct:    3 EVKLLGFWYSPFSRRVEWALKIKGVKYEYIEEDRDNKSSLLLQSNPIHKKVPVLIHNGKRIVESMVILEYIDETFEGPS-ILPKDPYDRALARFWAKFLDDKV-PAVVKTFLRKGEEQEKDKEEVCEMLKVLDNELKDKKFFVGDKFGFADIAANLVAFWLGVFE-EASGVVLVTSEKFPNFCKWRGEYINCSQIKESLPPRDELLAF 207          
BLAST of CK936908 vs. ExPASy Swiss-Prot
Match: GSTX6_SOYBN (Probable glutathione S-transferase OS=Glycine max GN=HSP26-A PE=2 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.426e-37
Identity = 88/221 (39.82%), Postives = 124/221 (56.11%), Query Frame = 3
Query:    6 DEVVLLDFWPSMFGIRVRIALAEKGVKYEYKEEDLKNKSPLLLQMNPVHKKIPVLIHNGRPVCESPIIVQYIDEVWKDKAPLLPSDPYQRAQARFWVDFIDKKMYDS-SRKTWTTKGXXXXXXXXXXXXVLKTLEGQLGDKPFFGGDNFGYVDLSLIPFYCWFYTYETCG--KFSVEAECPKFIAWVKRCLQRETVAKALPDGKKVFEFVSVMRTNLGWSR 659
            ++V LL    S F  RV+IAL  KGV+Y++ EE+L NKS LLL+ NPVHKK+PV +HN +P+ ES +IV+YIDE WK+  P+LPSDPYQRA ARFW  FID K+  + S+  +T                L+ LE +L DK FFGG+ FG VD++ +    W   ++     +     + P    W +  L    V + LP    +F +      +L  S+
Sbjct:    6 EDVKLLGIVGSPFVCRVQIALKLKGVEYKFLEENLGNKSDLLLKYNPVHKKVPVFVHNEQPIAESLVIVEYIDETWKNN-PILPSDPYQRALARFWSKFIDDKIVGAVSKSVFTVDEKEREKNVEETYEALQFLENELKDKKFFGGEEFGLVDIAAVFIAFWIPIFQEIAGLQLFTSEKFPILYKWSQEFLNHPFVHEVLPPRDPLFAYFKARYESLSASK 225          
The following BLAST results are available for this feature:
BLAST of CK936908 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 16
Match NameE-valueIdentityDescription
GSTX4_TOBAC8.511e-9170.83Probable glutathione S-transferase OS=Nicotiana ta... [more]
GSTXC_TOBAC7.205e-9069.91Probable glutathione S-transferase parC OS=Nicotia... [more]
GSTX3_SOYBN3.242e-8264.95Glutathione S-transferase 3 OS=Glycine max GN=GST3... [more]
GSTXA_TOBAC5.722e-7960.00Probable glutathione S-transferase parA OS=Nicotia... [more]
GSTX1_NICPL9.454e-7457.67Probable glutathione S-transferase MSR-1 OS=Nicoti... [more]
GSTU1_ORYSJ5.949e-6049.55Probable glutathione S-transferase GSTU1 OS=Oryza ... [more]
GSTU1_ORYSI1.325e-5950.00Probable glutathione S-transferase GSTU1 OS=Oryza ... [more]
GSTX2_TOBAC8.359e-3844.44Probable glutathione S-transferase OS=Nicotiana ta... [more]
GSTX1_TOBAC1.092e-3743.75Probable glutathione S-transferase OS=Nicotiana ta... [more]
GSTX6_SOYBN1.426e-3739.82Probable glutathione S-transferase OS=Glycine max ... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004516_E10 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0002_IIIF_E10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK936908 ID=CK936908; Name=CK936908; organism=Citrus sinensis; type=EST; length=836bp
GGGGGGACGAAGTGGTTCTGTTGGATTTCTGGCCCAGCATGTTTGGGATA
AGGGTCAGGATTGCTCTGGCGGAGAAAGGCGTCAAGTATGAGTACAAGGA
AGAGGACTTGAAGAACAAGAGCCCCCTGCTTCTGCAGATGAACCCCGTTC
ACAAGAAGATCCCGGTTCTCATCCACAACGGCAGACCGGTCTGTGAGTCA
CCCATCATTGTTCAGTACATTGATGAAGTGTGGAAGGACAAGGCTCCATT
GCTTCCCTCTGATCCCTACCAGAGAGCTCAAGCTAGGTTCTGGGTAGATT
TCATTGACAAGAAGATGTACGATTCTTCGAGGAAGACATGGACCACAAAG
GGAGAAGAGCAGGAGGCAGCTAAGAAGGAGTTCTTTGAAGTTCTGAAGAC
TTTGGAAGGGCAGCTTGGAGACAAGCCTTTCTTTGGAGGAGACAATTTTG
GGTATGTGGATTTAAGTTTGATCCCATTCTATTGTTGGTTTTACACGTAT
GAGACATGTGGAAAGTTCAGCGTCGAGGCTGAGTGCCCCAAGTTCATAGC
TTGGGTGAAGAGATGCTTGCAGAGGGAGACTGTTGCCAAGGCACTTCCTG
ATGGGAAGAAAGTGTTTGAATTTGTTTCAGTGATGAGGACAAATTTAGGA
TGGAGTAGAGAGAAAAAGGGACATACCTAGGAGCTGAGAATAAGTCAAGC
AGCGCAATCGTGCTGCCTGCTTATTCTTTAGGTGGTTGATGTTGGTTTGG
CTTGTGATGGTTGTTTTCCTATTGTGTTTTTGTATTCGGATTGTTGTATT
TCCCTAGTAAAAATAAGCTCCAATAATCCAATAAAG
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