CK936903
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK936903 vs. ExPASy Swiss-Prot
Match: RTNLB_ARATH (Reticulon-like protein B2 OS=Arabidopsis thaliana GN=RTNLB2 PE=1 SV=1) HSP 1 Score: 337.035 bits (863), Expect = 8.230e-92 Identity = 174/270 (64.44%), Postives = 205/270 (75.93%), Query Frame = 3 Query: 66 MADEHKHEEPAG-----------ESVMEKITEKIH---GHXXXXXXXXXXXXXXXXXXXXXLKTKVFRLFGREKPVHKVLGGGKPADVFLWRNKKISAGVLGGATAIWVLFQLLEYHLLTLVCHCLIVALAVLFLWSNASTFINKSPPRIPEVYIPEEPVLQLASALRFEINRAFTLLREIASGRDLKKFLSVIAGLWVVSIVGSWCNFLTLFYIVFVLLHTVPVIYEKYEDRVDSFSEKAWAEIKKQYAVFDAKVLSKIPRS-LKDKKK 830 MADEHKHEE + ES+MEK++EKIH LK+KV+RLFGRE+PVHKVLGGGKPAD+F+W++KK+S GV GGAT WVLF+L+EYHLLTL+CH +IVALAVLFLWSNA+ FI+KSPP+IPEV+IPEEP+LQLAS LR EINR + LREIASGRD+KKFLS IAGLWV+SI+G +FLTL YI VLL TVP+ Y+KYED+VDS+ EKA AE+KKQYAV DAKV SKIPR LKDKKK Sbjct: 1 MADEHKHEESSPNLDPAVEVVERESLMEKLSEKIHHKGDSSSSSSSDDENEKKSSSSSPKSLKSKVYRLFGRERPVHKVLGGGKPADIFMWKDKKMSGGVFGGATVAWVLFELMEYHLLTLLCHVMIVALAVLFLWSNATMFIHKSPPKIPEVHIPEEPLLQLASGLRIEINRGISSLREIASGRDIKKFLSAIAGLWVLSILGGCYSFLTLAYIALVLLFTVPLFYDKYEDKVDSYGEKAMAELKKQYAVLDAKVFSKIPRGPLKDKKK 270
BLAST of CK936903 vs. ExPASy Swiss-Prot
Match: RTNLA_ARATH (Reticulon-like protein B1 OS=Arabidopsis thaliana GN=RTNLB1 PE=1 SV=1) HSP 1 Score: 328.946 bits (842), Expect = 2.241e-89 Identity = 173/274 (63.14%), Postives = 203/274 (74.09%), Query Frame = 3 Query: 66 MADEHKHEE------PA-----GESVMEKITEKIH-------GHXXXXXXXXXXXXXXXXXXXXXLKTKVFRLFGREKPVHKVLGGGKPADVFLWRNKKISAGVLGGATAIWVLFQLLEYHLLTLVCHCLIVALAVLFLWSNASTFINKSPPRIPEVYIPEEPVLQLASALRFEINRAFTLLREIASGRDLKKFLSVIAGLWVVSIVGSWCNFLTLFYIVFVLLHTVPVIYEKYEDRVDSFSEKAWAEIKKQYAVFDAKVLSKIPRS-LKDKKK 830 MA+EHKH+E PA ES+M+KI+EKIH +K+KV+RLFGRE+PVHKVLGGGKPAD+F+W+NKK+S GVLGGATA WV+F+L+EYHLLTL+CH +IV LAVLFLWSNA+ FINKSPP+IPEV+IPEEP+LQLAS LR EINR F+ LREIASGRDLKKFL IAGLWV+SI+G NFLTL YI VLL TVP+ Y+KYED+VD EKA E+KKQYAV D KVLSKIP LK+KKK Sbjct: 1 MAEEHKHDESVIAPEPAVEVVERESLMDKISEKIHHGGDSSSSSSSSDDEDEKKKTKKPSSPSSSMKSKVYRLFGREQPVHKVLGGGKPADIFMWKNKKMSGGVLGGATAAWVVFELMEYHLLTLLCHVMIVVLAVLFLWSNATMFINKSPPKIPEVHIPEEPILQLASGLRIEINRGFSSLREIASGRDLKKFLIAIAGLWVLSILGGCFNFLTLAYIALVLLFTVPLAYDKYEDKVDPLGEKAMIELKKQYAVLDEKVLSKIPLGPLKNKKK 274
BLAST of CK936903 vs. ExPASy Swiss-Prot
Match: RTNLC_ARATH (Reticulon-like protein B3 OS=Arabidopsis thaliana GN=RTNLB3 PE=1 SV=1) HSP 1 Score: 326.635 bits (836), Expect = 1.112e-88 Identity = 167/246 (67.89%), Postives = 192/246 (78.05%), Query Frame = 3 Query: 66 MADEHKHEEPAGESVMEKITEKIHGHXXXXXXXXXXXXXXXXXXXXXLKTKVFRLFGREKPVHKVLGGGKPADVFLWRNKKISAGVLGGATAIWVLFQLLEYHLLTLVCHCLIVALAVLFLWSNASTFINKSPPRIPEVYIPEEPVLQLASALRFEINRAFTLLREIASGRDLKKFLSVIAGLWVVSIVGSWCNFLTLFYIVFVLLHTVPVIYEKYEDRVDSFSEKAWAEIKKQYAVFDAKVLSKI 803 MA+EHKHEE S+MEKI+EKIHGH LKTK++RLFGRE+P+HK+ GGGKPAD+FLWRNKK+S GVLG AT W+LF+LLEY+LLTL H I+ALAVLFLWS+ASTFI+KSP IPEV+IPE+ VLQLAS LR EINR FT+LR+IASGRDLKKFL VIAGLWV+S VGS CNFLTL YI VLL T+PV+YEKYED+VD F EKA EIKKQY FD KVLSK+ Sbjct: 1 MAEEHKHEE----SIMEKISEKIHGHDDSSSSSSDSDDDKNSAS---LKTKIYRLFGREQPLHKLFGGGKPADIFLWRNKKVSGGVLGAATVSWILFELLEYNLLTLFGHISILALAVLFLWSSASTFIHKSPLHIPEVHIPEDVVLQLASGLRIEINRGFTVLRDIASGRDLKKFLLVIAGLWVLSKVGSSCNFLTLIYIATVLLFTIPVLYEKYEDKVDDFGEKAMREIKKQYVEFDVKVLSKV 239
BLAST of CK936903 vs. ExPASy Swiss-Prot
Match: RTNLD_ARATH (Reticulon-like protein B4 OS=Arabidopsis thaliana GN=RTNLB4 PE=1 SV=1) HSP 1 Score: 326.25 bits (835), Expect = 1.453e-88 Identity = 166/260 (63.85%), Postives = 192/260 (73.85%), Query Frame = 3 Query: 66 MADEHKHEEPAGESVMEKITEKIHGHXXXXXXXXXXXXXXXXXXXXX-LKTKVFRLFGREKPVHKVLGGGKPADVFLWRNKKISAGVLGGATAIWVLFQLLEYHLLTLVCHCLIVALAVLFLWSNASTFINKSPPRIPEVYIPEEPVLQLASALRFEINRAFTLLREIASGRDLKKFLSVIAGLWVVSIVGSWCNFLTLFYIVFVLLHTVPVIYEKYEDRVDSFSEKAWAEIKKQYAVFDAKVL----SKIPRSLKDKKK 830 M ++HKHEE S++EKI EKIHGH K+K++RLFGREKPVHKVLGGGKPAD+FLWRNKK+S GVLG TA WVLF+L EYHLL +CH I ALA LFLWSNA TFI+KS P IPEV+IPE+P+LQL S LR EINR TLLR IASG+D+KKF+ VIAGLWV+SI+GS NFLTLFY VLL T+PV+YEKYED+VD++ EKA EIKKQYAV D KVL SKIPR +KKK Sbjct: 1 MVEDHKHEE----SILEKIVEKIHGHGDSSSLSDSDDDKKSTSSSSSSFKSKIYRLFGREKPVHKVLGGGKPADIFLWRNKKVSGGVLGAVTASWVLFELFEYHLLAFLCHFAIFALAALFLWSNACTFIHKSTPHIPEVHIPEDPILQLVSGLRIEINRGLTLLRNIASGKDVKKFILVIAGLWVLSIIGSCYNFLTLFYTATVLLFTIPVLYEKYEDKVDAYGEKAMREIKKQYAVLDEKVLRKVISKIPRGALNKKK 256
BLAST of CK936903 vs. ExPASy Swiss-Prot
Match: RTNLE_ARATH (Reticulon-like protein B5 OS=Arabidopsis thaliana GN=RTNLB5 PE=1 SV=1) HSP 1 Score: 315.079 bits (806), Expect = 3.349e-85 Identity = 157/256 (61.33%), Postives = 195/256 (76.17%), Query Frame = 3 Query: 66 MADEHKHEEPAGESVMEKITEKIHGHXXXXXXXXXXXXXXXXXXXXXLKTKVFRLFGREKPVHKVLGGGKPADVFLWRNKKISAGVLGGATAIWVLFQLLEYHLLTLVCHCLIVALAVLFLWSNASTFINKSPPRIPEVYIPEEPVLQLASALRFEINRAFTLLREIASGRDLKKFLSVIAGLWVVSIVGSWCNFLTLFYIVFVLLHTVPVIYEKYEDRVDSFSEKAWAEIKKQYAVFDAKVLSKIP-RSLKDKKK 830 MA+E + P ES+MEKI+EKIH H +K K++R+FGREKPVHKVLGGGKPADVFLWR+KK+S VLG ATAIWVLF+L+EYHLL+L+CH I+AL LFLWSNA T INK+ P+IPE+++PEE L +AS+LR E+N+AF +LR IA GRDLKKFL V+ GLW++S+VG+W NFLTL YI FV+LHTVP++YEK+ED+VD +EKA E++KQY VFD KVLSKIP SLK K K Sbjct: 1 MAEEIEKSVPTEESLMEKISEKIHHHDSSSSSESEYEKPDSPSA---VKAKIYRMFGREKPVHKVLGGGKPADVFLWRDKKLSGAVLGVATAIWVLFELVEYHLLSLLCHISILALGGLFLWSNAHTLINKTSPQIPEIHVPEEAFLVVASSLRNELNQAFVILRSIALGRDLKKFLMVVVGLWIISVVGNWFNFLTLVYICFVILHTVPMLYEKHEDKVDPLAEKAMKELQKQYVVFDEKVLSKIPIASLKAKAK 253
BLAST of CK936903 vs. ExPASy Swiss-Prot
Match: RTNLF_ARATH (Reticulon-like protein B6 OS=Arabidopsis thaliana GN=RTNLB6 PE=1 SV=1) HSP 1 Score: 303.523 bits (776), Expect = 1.008e-81 Identity = 155/254 (61.02%), Postives = 188/254 (74.02%), Query Frame = 3 Query: 66 MADEHKHEEPAGESVMEKITEKIHGHXXXXXXXXXXXXXXXXXXXXXLKTKVFRLFGREKPVHKVLGGGKPADVFLWRNKKISAGVLGGATAIWVLFQLLEYHLLTLVCHCLIVALAVLFLWSNASTFINKSPPRIPEVYIPEEPVLQLASALRFEINRAFTLLREIASGRDLKKFLSVIAGLWVVSIVGSWCNFLTLFYIVFVLLHTVPVIYEKYEDRVDSFSEKAWAEIKKQYAVFDAKVLSKIP-RSLKDK 824 MA+E + ES+MEKI +KIH H LK K++RLFGREKPVHKVLGGG PADVFLWR+KK+SA VLG ATAIWVLF+L+EYH L+LVCH LI ALA LFL SNA F+NK+PP+IPE++I EE L + SALR E+N+AF +LR IA GRDLKKFL V+ GLW++S+VG+W NFLTL YI FV+LHTVP++YEK+ED+VD +EK E+KK Y VFD KVLSK+P SLK K Sbjct: 1 MAEELEKSMHKEESLMEKIADKIHDHDSSSSSDSEHEKPESPSA---LKAKIYRLFGREKPVHKVLGGGLPADVFLWRDKKLSASVLGVATAIWVLFELVEYHFLSLVCHILIFALAALFLLSNAHAFMNKTPPKIPEIHIKEEHFLMIVSALRNELNQAFVILRSIALGRDLKKFLMVVFGLWIISVVGNWFNFLTLVYICFVVLHTVPMLYEKHEDKVDPVAEKTLKELKKHYMVFDEKVLSKLPVASLKAK 251
BLAST of CK936903 vs. ExPASy Swiss-Prot
Match: RTNLG_ARATH (Reticulon-like protein B7 OS=Arabidopsis thaliana GN=RTNLB7 PE=2 SV=2) HSP 1 Score: 235.728 bits (600), Expect = 2.582e-61 Identity = 110/200 (55.00%), Postives = 148/200 (74.00%), Query Frame = 3 Query: 207 LKTKVFRLFGREKPVHKVLGGGKPADVFLWRNKKISAGVLGGATAIWVLFQLLEYHLLTLVCHCLIVALAVLFLWSNASTFINKSPPRIPEVYIPEEPVLQLASALRFEINRAFTLLREIASGRDLKKFLSVIAGLWVVSIVGSWCNFLTLFYIVFVLLHTVPVIYEKYEDRVDSFSEKAWAEIKKQYAVFDAKVLSKIP 806 + ++R+FGRE+P+H VLGGGKPADV LWR+KK++ G+L T IW+LF LLT +C I+ L + FLWSNA +NKSP + ++YIPE+P+LQ ASA+ FE+N AF LR IA RD+K F+ + GLW+VS++G+W +FL+L YI FVL+HTVP++YEKYED +D +EKA E+KK Y VF+AK LSKIP Sbjct: 47 INAPIYRMFGRERPIHMVLGGGKPADVLLWRDKKVTLGLLSAVTVIWLLFGFGGRRLLTSLCRGSILFLLLSFLWSNA---LNKSPENMMDIYIPEKPLLQAASAMTFELNCAFATLRSIALERDIKNFVMAVIGLWLVSVIGNWFSFLSLLYICFVLIHTVPMLYEKYEDEIDPIAEKAVIEMKKHYQVFEAKFLSKIP 243
BLAST of CK936903 vs. ExPASy Swiss-Prot
Match: RTNLH_ARATH (Reticulon-like protein B8 OS=Arabidopsis thaliana GN=RTNLB8 PE=1 SV=1) HSP 1 Score: 211.075 bits (536), Expect = 6.811e-54 Identity = 100/202 (49.50%), Postives = 137/202 (67.82%), Query Frame = 3 Query: 225 RLFGREKPVHKVLGGGKPADVFLWRNKKISAGVLGGATAIWVLFQLLEYHLLTLVCHCLIVALAVLFLWSNASTFINKSPPRIPEVYIPEEPVLQLASALRFEINRAFTLLREIASGRDLKKFLSVIAGLWVVSIVGSWCNFLTLFYIVFVLLHTVPVIYEKYEDRVDSFSEKAWAEIKKQYAVFDAKVLSKIPRSLKDKKK 830 RLF R+KP+H VLGGGK ADV LWRNKKISA VL GATAIWVLF+ + +H L+LVC+ L++ + F+WSNAS F+N+S R+P + +P++ ++ A+ E+NR L+++A +LK+FL + GLWV ++VGS CNFLT+ YI FV HT+PV+YE+YED VD F + + Y D LS+IP KK Sbjct: 44 RLFDRQKPIHHVLGGGKSADVLLWRNKKISASVLMGATAIWVLFEWINFHFLSLVCYALLLGMIAQFVWSNASGFLNRSQSRVPRLVLPKDFFAEVGVAVGKEVNRGLLFLQDLACKGNLKQFLMAVIGLWVAAMVGSCCNFLTVLYIGFVGAHTMPVLYERYEDEVDGFMDSMIMKFHSHYKKLDTGFLSRIPSGKFGLKK 245
BLAST of CK936903 vs. ExPASy Swiss-Prot
Match: RTNLI_ARATH (Reticulon-like protein B9 OS=Arabidopsis thaliana GN=RTNLB9 PE=2 SV=1) HSP 1 Score: 178.718 bits (452), Expect = 3.746e-44 Identity = 86/205 (41.95%), Postives = 130/205 (63.41%), Query Frame = 3 Query: 216 KVFRLFGREKPVHKVLGGGKPADVFLWRNKKISAGVLGGATAIWVLFQLLEYHLLTLVCHCLIVALAVLFLWSNASTFINKSPPRIPEVYIPEEPVLQLASALRFEINRAFTLLREIASGRDLKKFLSVIAGLWVVSIVGSWCNFLTLFYIVFVLLHTVPVIYEKYEDRVDSFSEKAWAEIKKQYAVFDAKVLSKIPR-SLKDKK 827 K +LF R++ +H + GGGK AD+ LWR KI+A ++ G + +W L +++EY+ +TL+CH + ++ F+WS AS F+N P IPEV + E QLA + N+ T L ++A GRD F L++VSI+G++ NF+ L +I FV + T+PV+YE YED VD+ + K ++KK Y D VLSKIPR ++K+KK Sbjct: 19 KTTKLFTRQRSIHSIFGGGKVADILLWREPKIAATLVIGVSILWFLMEVVEYNFITLICHASMTSMLFFFIWSTASDFLNWERPLIPEVVLDESSFKQLARSFHVRFNQILTKLLDVACGRDPPLFFLTTISLYIVSIIGTYFNFVNLLFIGFVSMQTLPVMYEMYEDDVDTAAGKLMRKMKKLYKKVDTNVLSKIPRGTVKNKK 223
BLAST of CK936903 vs. ExPASy Swiss-Prot
Match: RTNLN_ARATH (Reticulon-like protein B14 OS=Arabidopsis thaliana GN=RTNLB14 PE=2 SV=2) HSP 1 Score: 139.428 bits (350), Expect = 2.519e-32 Identity = 72/197 (36.55%), Postives = 120/197 (60.91%), Query Frame = 3 Query: 237 REKPVHKVLGGGKPADVFLWRNKKISAGVLGGATAIWVLFQLLEYHLLTLVCHCLIVALAVLFLWS--NASTFINKSPPRIPEVYIPEEPVLQLASALRF---EINRAFTLLREIASGRDLKKFLSVIAGLWVVSIVGSWCNFLTLFYIVFVLLHTVPVIYEKYEDRVDSFSEKAWAEIKKQYAVFDAKVLSKIPRS 812 R + ++ LGGG+ AD+ W+NKK S +LG T IW LF+++EY +T +C L++ + + +WS +S I PP I ++ I E S RF +IN L +I+SG+D + + LW++S+VG++ + LTL YIVFV L T+P++YE+YE+ + + K+ ++KK F++KV++KIP++ Sbjct: 18 RRRSLYHNLGGGRFADIMFWKNKKESGTILGVFTLIWFLFEVVEYPFITFLCQILLLFIFIFLIWSYIGSSQLIQSKPPSINDLRISE-------SNWRFLFNKINWFIIKLYDISSGKDFRLLFLAVVSLWILSVVGNYFSSLTLLYIVFVGLETIPMLYEQYEEELTYAASKSGRDMKKLLNKFNSKVINKIPKA 207 The following BLAST results are available for this feature:
BLAST of CK936903 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
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Sequences
The
following sequences are available for this feature:
EST sequence >CK936903 ID=CK936903; Name=CK936903; organism=Citrus sinensis; type=EST; length=877bpback to top |