CX675215

Overview
NameCX675215
Unique NameCX675215
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length778
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX675215 vs. ExPASy Swiss-Prot
Match: ADH2_HORVU (Alcohol dehydrogenase 2 OS=Hordeum vulgare GN=ADH2 PE=3 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 2.743e-45
Identity = 63/93 (67.74%), Postives = 76/93 (81.72%), Query Frame = -3
Query:  381 HDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIRMD 659
            HDGWGVA      +K+  FKTHPMN LNERTL+GTFFGNYKPR+ LP VV+ YM KELE++KFITH++PFS+IN AFDLML GE +RC+IR +
Sbjct:  286 HDGWGVA------HKEAVFKTHPMNFLNERTLRGTFFGNYKPRTGLPGVVDMYMRKELELDKFITHSLPFSQINTAFDLMLRGEGLRCVIRSE 372          

HSP 2 Score: 63.929 bits (154), Expect = 2.743e-45
Identity = 28/39 (71.79%), Postives = 35/39 (89.74%), Query Frame = -2
Query:  661 KDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECV 777
            KD+ KPVQ+VI +MT+GGV+R+VECTG+  AMISAFECV
Sbjct:  247 KDHTKPVQEVIVEMTDGGVNRAVECTGNADAMISAFECV 285          
BLAST of CX675215 vs. ExPASy Swiss-Prot
Match: ADH1_ARATH (Alcohol dehydrogenase class-P OS=Arabidopsis thaliana GN=ADH1 PE=1 SV=2)

HSP 1 Score: 177.563 bits (449), Expect = 6.848e-44
Identity = 83/98 (84.69%), Postives = 88/98 (89.80%), Query Frame = -3
Query:  384 QHLNAFHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIRM 677
            Q     HDGWGVAVLVGVP+KDDAFKTHPMN LNERTLKGTFFGNYKP++D+P VVEKYMNKELE+EKFITHTVPFSEINKAFD ML GESIRCII M
Sbjct:  280 QAFECVHDGWGVAVLVGVPSKDDAFKTHPMNFLNERTLKGTFFGNYKPKTDIPGVVEKYMNKELELEKFITHTVPFSEINKAFDYMLKGESIRCIITM 377          

HSP 2 Score: 75.485 bits (184), Expect = 3.691e-13
Identity = 36/50 (72.00%), Postives = 40/50 (80.00%), Query Frame = -2
Query:  628 KDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVSRWLGCCCACG 777
            KD+DKP+QQVIA+MT+GGVDRSVECTGSVQAMI AFECV    G     G
Sbjct:  247 KDHDKPIQQVIAEMTDGGVDRSVECTGSVQAMIQAFECVHDGWGVAVLVG 296          
BLAST of CX675215 vs. ExPASy Swiss-Prot
Match: ADH1_PETHY (Alcohol dehydrogenase 1 OS=Petunia hybrida GN=ADH1 PE=3 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 1.168e-43
Identity = 82/93 (88.17%), Postives = 88/93 (94.62%), Query Frame = -3
Query:  381 HDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIRMD 659
            HDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKP+SD+PSVV+KYM KELE+EKFITH VPFSEINKAFD ML GESIRC+I M+
Sbjct:  289 HDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPKSDIPSVVDKYMKKELELEKFITHQVPFSEINKAFDYMLKGESIRCMITME 381          

HSP 2 Score: 69.707 bits (169), Expect = 2.025e-11
Identity = 36/51 (70.59%), Postives = 40/51 (78.43%), Query Frame = -2
Query:  628 KDY-DKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVSRWLGCCCACG 777
            KD+ DKPVQQVIA+MT+GGVDRSVECTG+V AMISAFECV    G     G
Sbjct:  249 KDHGDKPVQQVIAEMTDGGVDRSVECTGNVNAMISAFECVHDGWGVAVLVG 299          
BLAST of CX675215 vs. ExPASy Swiss-Prot
Match: ADH1_PEA (Alcohol dehydrogenase 1 OS=Pisum sativum PE=3 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 4.439e-43
Identity = 81/93 (87.10%), Postives = 88/93 (94.62%), Query Frame = -3
Query:  381 HDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIRMD 659
            HDGWGVAVLVGVP+KDDAFKTHPMN LNERTLKGTF+GNYKPR+DLP+VVEKYM  ELE+EKFITHTVPFSEINKAFD ML GESIRCII+M+
Sbjct:  287 HDGWGVAVLVGVPSKDDAFKTHPMNFLNERTLKGTFYGNYKPRTDLPNVVEKYMKGELELEKFITHTVPFSEINKAFDYMLKGESIRCIIKME 379          

HSP 2 Score: 76.2554 bits (186), Expect = 2.164e-13
Identity = 36/50 (72.00%), Postives = 41/50 (82.00%), Query Frame = -2
Query:  628 KDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVSRWLGCCCACG 777
            K++DKPVQQVIA+MTNGGVDR+VECTGS+QAMISAFECV    G     G
Sbjct:  248 KEHDKPVQQVIAEMTNGGVDRAVECTGSIQAMISAFECVHDGWGVAVLVG 297          
BLAST of CX675215 vs. ExPASy Swiss-Prot
Match: ADH1_SOLTU (Alcohol dehydrogenase 1 OS=Solanum tuberosum GN=ADH1 PE=2 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 7.572e-43
Identity = 80/93 (86.02%), Postives = 88/93 (94.62%), Query Frame = -3
Query:  381 HDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIRMD 659
            HDGWGVAVLVGVP+K+  FKTHPMNLLNERTLKGTFFGNYKPRSD+PSVVEKYMNKELE+EKFITHT+PF+EINKAFDLML GE +RCII M+
Sbjct:  287 HDGWGVAVLVGVPHKEAVFKTHPMNLLNERTLKGTFFGNYKPRSDIPSVVEKYMNKELELEKFITHTLPFAEINKAFDLMLKGEGLRCIITME 379          

HSP 2 Score: 71.633 bits (174), Expect = 5.329e-12
Identity = 34/50 (68.00%), Postives = 38/50 (76.00%), Query Frame = -2
Query:  628 KDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVSRWLGCCCACG 777
            KDY KPVQ+VIA+MT+GGVDRSVECTG + AMISAFECV    G     G
Sbjct:  248 KDYSKPVQEVIAEMTDGGVDRSVECTGHIDAMISAFECVHDGWGVAVLVG 297          
BLAST of CX675215 vs. ExPASy Swiss-Prot
Match: ADH3_SOLTU (Alcohol dehydrogenase 3 OS=Solanum tuberosum GN=ADH3 PE=2 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 2.203e-42
Identity = 79/93 (84.95%), Postives = 87/93 (93.55%), Query Frame = -3
Query:  381 HDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIRMD 659
            HDGWGVAVLVGVP+K+  FKTHPMN LNERTLKGTFFGNYKPRSD+PSVVEKYMNKELE+EKFITHT+PF+EINKAFDLML GE +RCII M+
Sbjct:  287 HDGWGVAVLVGVPHKEAVFKTHPMNFLNERTLKGTFFGNYKPRSDIPSVVEKYMNKELELEKFITHTLPFAEINKAFDLMLKGEGLRCIITME 379          

HSP 2 Score: 71.633 bits (174), Expect = 5.329e-12
Identity = 34/50 (68.00%), Postives = 38/50 (76.00%), Query Frame = -2
Query:  628 KDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVSRWLGCCCACG 777
            KDY KPVQ+VIA+MT+GGVDRSVECTG + AMISAFECV    G     G
Sbjct:  248 KDYSKPVQEVIAEMTDGGVDRSVECTGHIDAMISAFECVHDGWGVAVLVG 297          
BLAST of CX675215 vs. ExPASy Swiss-Prot
Match: ADH2_SOLTU (Alcohol dehydrogenase 2 OS=Solanum tuberosum GN=ADH2 PE=2 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 2.203e-42
Identity = 79/93 (84.95%), Postives = 87/93 (93.55%), Query Frame = -3
Query:  381 HDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIRMD 659
            HDGWGVAVLVGVP+K+  FKTHPMN LNERTLKGTFFGNYKPRSD+PSVVEKYMNKELE+EKFITHT+PF+EINKAFDLML GE +RCII M+
Sbjct:  287 HDGWGVAVLVGVPHKEAVFKTHPMNFLNERTLKGTFFGNYKPRSDIPSVVEKYMNKELELEKFITHTLPFAEINKAFDLMLKGEGLRCIITME 379          

HSP 2 Score: 71.633 bits (174), Expect = 5.329e-12
Identity = 34/50 (68.00%), Postives = 38/50 (76.00%), Query Frame = -2
Query:  628 KDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVSRWLGCCCACG 777
            KDY KPVQ+VIA+MT+GGVDRSVECTG + AMISAFECV    G     G
Sbjct:  248 KDYSKPVQEVIAEMTDGGVDRSVECTGHIDAMISAFECVHDGWGVAVLVG 297          
BLAST of CX675215 vs. ExPASy Swiss-Prot
Match: ADH1_TRIRP (Alcohol dehydrogenase 1 OS=Trifolium repens GN=ADH1 PE=2 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 2.877e-42
Identity = 79/93 (84.95%), Postives = 87/93 (93.55%), Query Frame = -3
Query:  381 HDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIRMD 659
            HDGWGVAVLVGVP KDDAFKTHPMN LNERTLKGTF+GNYKPR+DLP+VVE+YM  ELE+EKFITH++PFSEINKAFD ML GESIRCIIRM+
Sbjct:  287 HDGWGVAVLVGVPKKDDAFKTHPMNFLNERTLKGTFYGNYKPRTDLPNVVEQYMKGELELEKFITHSIPFSEINKAFDYMLKGESIRCIIRME 379          

HSP 2 Score: 77.411 bits (189), Expect = 9.712e-14
Identity = 37/54 (68.52%), Postives = 43/54 (79.63%), Query Frame = -2
Query:  616 KDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVSRWLGCCCACGCAKQ 777
            KD+DKPVQQVIA+MT+GGVDR+VECTGS+QAMISAFECV    G     G  K+
Sbjct:  248 KDHDKPVQQVIAEMTDGGVDRAVECTGSIQAMISAFECVHDGWGVAVLVGVPKK 301          
BLAST of CX675215 vs. ExPASy Swiss-Prot
Match: ADH2_ORYSJ (Alcohol dehydrogenase 2 OS=Oryza sativa subsp. japonica GN=ADH2 PE=2 SV=2)

HSP 1 Score: 171.4 bits (433), Expect = 4.908e-42
Identity = 78/93 (83.87%), Postives = 86/93 (92.47%), Query Frame = -3
Query:  381 HDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIRMD 659
            HDGWGVAVLVGVP KDD FKTHPMN LNE+TLKGTFFGNYKPR+DLP+VVE YM KELE+EKFITH+VPFSEIN AFDLML GES+RC++RMD
Sbjct:  286 HDGWGVAVLVGVPTKDDVFKTHPMNFLNEKTLKGTFFGNYKPRTDLPNVVELYMKKELELEKFITHSVPFSEINTAFDLMLKGESLRCVMRMD 378          
BLAST of CX675215 vs. ExPASy Swiss-Prot
Match: ADH2_ORYSI (Alcohol dehydrogenase 2 OS=Oryza sativa subsp. indica GN=ADH2 PE=2 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 4.908e-42
Identity = 78/93 (83.87%), Postives = 86/93 (92.47%), Query Frame = -3
Query:  381 HDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIRMD 659
            HDGWGVAVLVGVP KDD FKTHPMN LNE+TLKGTFFGNYKPR+DLP+VVE YM KELE+EKFITH+VPFSEIN AFDLML GES+RC++RMD
Sbjct:  286 HDGWGVAVLVGVPTKDDVFKTHPMNFLNEKTLKGTFFGNYKPRTDLPNVVELYMKKELELEKFITHSVPFSEINTAFDLMLKGESLRCVMRMD 378          
The following BLAST results are available for this feature:
BLAST of CX675215 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 107
Match NameE-valueIdentityDescription
ADH2_HORVU2.743e-4567.74Alcohol dehydrogenase 2 OS=Hordeum vulgare GN=ADH2... [more]
ADH1_ARATH6.848e-4484.69Alcohol dehydrogenase class-P OS=Arabidopsis thali... [more]
ADH1_PETHY1.168e-4388.17Alcohol dehydrogenase 1 OS=Petunia hybrida GN=ADH1... [more]
ADH1_PEA4.439e-4387.10Alcohol dehydrogenase 1 OS=Pisum sativum PE=3 SV=1[more]
ADH1_SOLTU7.572e-4386.02Alcohol dehydrogenase 1 OS=Solanum tuberosum GN=AD... [more]
ADH3_SOLTU2.203e-4284.95Alcohol dehydrogenase 3 OS=Solanum tuberosum GN=AD... [more]
ADH2_SOLTU2.203e-4284.95Alcohol dehydrogenase 2 OS=Solanum tuberosum GN=AD... [more]
ADH1_TRIRP2.877e-4284.95Alcohol dehydrogenase 1 OS=Trifolium repens GN=ADH... [more]
ADH2_ORYSJ4.908e-4283.87Alcohol dehydrogenase 2 OS=Oryza sativa subsp. jap... [more]
ADH2_ORYSI4.908e-4283.87Alcohol dehydrogenase 2 OS=Oryza sativa subsp. ind... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_60F03_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-60F03-K6-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX675215 ID=CX675215; Name=CX675215; organism=Citrus sinensis; type=EST; length=778bp
TTTTTTTTTTTTTTTTTGAAGCCGACAAAAGCGACTGGCGTAATTACCAT
ATCATTAACACTGCAACGGCGTATAAGAAAGAAGATTTACACGAAAATCT
TTATTACATAAGCTACAAAAAGAAGTACTGTAAGAAATAGGTAGAAAACA
CACCTCTTTGTACGCCATATGCAGCAAGTCATCAAACAGAAAAACAAAAC
AAAAAAAGGGACTGTAAGAAATATGTAGAAAACACAACTCTTTGAAAGCC
ATTCGCAGCAAGTCATCAAACATACAGCATAAATTACTTATTCTCGGGGT
AATATATAACTTGGAAAATTATGTGATCATCTTCATTCTGCCTCCATTAG
ATTGATCAGCAACAGCAGACACATCTAACCATCCATGCGAATGATGCACC
TAATGCTTTCTCCCGCAAGCATGAGGTCAAATGCCTTGTTTATCTCCGAG
AAGGGCACAGTGTGAGTGATGAATTTCTCGACCTCCAACTCCTTGTTCAT
GTATTTTTCAACAACAGAAGGAAGATCAGAGCGAGGTTTGTAGTTGCCAA
AGAAGGTACCCTTAAGAGTCCTCTCATTAAGCAGATTCATGGGATGAGTC
TTGAATGCATCATCTTTGTTTGGCACACCCACAAGCACAGCAACACCCCA
ACCATCGTGAAACGCATTCAAATGCTGAAATCATGGCCTGGACGCTTCCA
GTACATTCAACACTTCTATCCACTCCACCATTGGTCATGTCAGCAATCAC
CTGTTGAACAGGTTTGTCATAATCTTTT
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