CK936892

Overview
NameCK936892
Unique NameCK936892
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length879
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6033 contig Csv1_Contig6033:542..1420. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK936892 vs. ExPASy Swiss-Prot
Match: GP107_MOUSE (Protein GPR107 OS=Mus musculus GN=Gpr107 PE=2 SV=2)

HSP 1 Score: 199.904 bits (507), Expect = 1.579e-50
Identity = 106/275 (38.55%), Postives = 155/275 (56.36%), Query Frame = 2
Query:   59 FTFNNLNGKSEYNTIYSENDADQ---YTLVFANCLQQLKVSMDVRSAMYNLE-GRSNNRDYLSAGKTILPRIYFLFSLIYFTLAGLWIHVLYRKRLTVFRIHFFMXXXXXXXXXXXXCEAEDKSYIKRTG-SAHGWDVLFYMFSFLKGITLFTLIVLIGTGWSFLKPYLQDKEKKVLMIVIPLQVVANIAQVVIDETGPYGQDWITWKQXXXXXXXXXXXXXXFPIVWSIKNLREAARTDGKAAVNLMKLTLFRQYYIVVICYIYFTRVVVYGLE 868
            F+ +  +G   +   ++ +  DQ   Y+L F  C        +  S   N+     N   YLSAG+  LP++Y   +L +F    +WIH+L ++R  VF+IH+ M              A D  YI   G    GW V++Y+   LKG  LF  I LIGTGW+F+K  L DK+KK+ MIVIPLQV+AN+A ++I+ T     ++  WK               FP+VWSI++L+EA+ TDGKAA+NL KL LFR YY++++CYIYFTR++ + L+
Sbjct:  193 FSIHKNDGVVSFQFFFNISTDDQEGLYSLYFHKCSGNNVKPGEQASFSLNIAITEKNPNSYLSAGEIPLPKLYVSMALFFFLSGTIWIHILRKRRNDVFKIHWLMAALPFTKSLSLVFHAIDYHYISSQGFPIEGWAVVYYITHLLKGALLFITIALIGTGWAFIKHILSDKDKKIFMIVIPLQVLANVAYIIIESTEEGTTEYGLWKDSLFLVDLLCCGAILFPVVWSIRHLQEASATDGKAAINLAKLRLFRHYYVLIVCYIYFTRIIAFLLK 467          
BLAST of CK936892 vs. ExPASy Swiss-Prot
Match: GP107_HUMAN (Protein GPR107 OS=Homo sapiens GN=GPR107 PE=2 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 5.812e-45
Identity = 108/323 (33.44%), Postives = 160/323 (49.54%), Query Frame = 2
Query:   59 FTFNNLNGKSEYNTIYSENDADQ---YTLVFANCLQQLKVSMDVRSAMYNLEGRSNNRD-YLSAGKTILPRIYFLFSLIYFTLAGLWIHVLYRKRLTVFRIHFFMXXXXXXXXXXXXCEAEDKSYIKRTG-SAHGWDVLFYMFSFLKGITLFTLIVLIGTGWSFLKPYLQDKEKKVLMIVIPLQVVANIAQVVIDETGPYGQDWITWKQXXXXXXXXXXXXXXFPIVWSIKNLREAARTDGK------------------------------------------------AAVNLMKLTLFRQYYIVVICYIYFTRVVVYGLE 868
            F+ +N  G   +   ++ +  DQ   Y+L F  CL + ++  D  +   ++E    N D YLSAG+  LP++Y   +  +F    +WIH+L ++R  VF+IH+ M              A D  YI   G    GW V++Y+   LKG  LF  I LIGTGW+F+K  L DK+KK+ MIVIPLQV+AN+A ++I+ T     ++  WK               FP+VWSI++L+EA+ TDGK                                                AA+NL KL LFR YY++++CYIYFTR++ + L+
Sbjct:  195 FSVHNNGGAVSFQFFFNISTDDQEGLYSLYFHKCLGK-ELPSDKFTFSLDIEITEKNPDSYLSAGEIPLPKLYISMAFFFFLSGTIWIHILRKRRNDVFKIHWLMAALPFTKSLSLVFHAIDYHYISSQGFPIEGWAVVYYITHLLKGALLFITIALIGTGWAFIKHILSDKDKKIFMIVIPLQVLANVAYIIIESTEEGTTEYGLWKDSLFLVDLLCCGAILFPVVWSIRHLQEASATDGKGDSMGPLQQRANLRAGSRIESHHFAQADLELLASSCPPASVSQRAGITAAINLAKLKLFRHYYVLIVCYIYFTRIIAFLLK 516          
BLAST of CK936892 vs. ExPASy Swiss-Prot
Match: GP108_HUMAN (Protein GPR108 OS=Homo sapiens GN=GPR108 PE=2 SV=2)

HSP 1 Score: 176.407 bits (446), Expect = 1.870e-43
Identity = 101/281 (35.94%), Postives = 152/281 (54.09%), Query Frame = 2
Query:   41 DLIKHVFTFNNLNGKSEYNTIYSENDADQYTLVFANCLQQL---KVSMDVRSAMYNLEGRSNNRD-YLSAGKTILPRIYFLFSLIYFTLAGLWIHVLYRKRLTVFRIHFFMXXXXXXXXXXXXCEAEDKSYIKRTGSA-HGWDVLFYMFSFLKGITLFTLIVLIGTGWSFLKPYLQDKEKKVLMIVIPLQVVANIAQVVIDETGPYGQDWITWKQXXXXXXXXXXXXXXFPIVWSIKNLREAARTDGKAAVNLMKLTLFRQYYIVVICYIYFTRVVVYGLE 868
            DL+  +   NN    S +  I S+ +  QY+L F NC   +   +   D+   +     R  N D +LSA +  L ++Y + S  +      W+ +L R   +VF+IH+ M              + +  +I   G    G  V++Y+   LKG  LF  I LIG+GW+F+K  L DKEKKV  IVIP+QV+AN+A ++I+       D++ WK+              FP+VWSI++L++A+ TDGK AVNL KL LFR YY++VICY+YFTR++   L+
Sbjct:  191 DLVLGLSHLNNSYNFSFHVVIGSQAEEGQYSLNFHNCNNSVPGKEHPFDITVMI-----REKNPDGFLSAAEMPLFKLYMVMSACFLAAGIFWVSILCRNTYSVFKIHWLMAALAFTKSISLLFHSINYYFINSQGHPIEGLAVMYYIAHLLKGALLFITIALIGSGWAFIKYVLSDKEKKVFGIVIPMQVLANVAYIIIESREEGASDYVLWKEILFLVDLICCGAILFPVVWSIRHLQDASGTDGKVAVNLAKLKLFRHYYVMVICYVYFTRIIAILLQ 466          
BLAST of CK936892 vs. ExPASy Swiss-Prot
Match: GP108_RAT (Protein GPR108 OS=Rattus norvegicus GN=Gpr108 PE=2 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 7.856e-42
Identity = 101/279 (36.20%), Postives = 147/279 (52.69%), Query Frame = 2
Query:   35 QSDLIKHVFTFNNLNGKSEYNTIYSENDADQYTLVFANCL-----QQLKVSMDVRSAMYNLEGRSNNRDYLSAGKTILPRIYFLFSLIYFTLAGLWIHVLYRKRLTVFRIHFFMXXXXXXXXXXXXCEAEDKSYIKRTGSA-HGWDVLFYMFSFLKGITLFTLIVLIGTGWSFLKPYLQDKEKKVLMIVIPLQVVANIAQVVIDETGPYGQDWITWKQXXXXXXXXXXXXXXFPIVWSIKNLREAARTDGKAAVNLMKLTLFRQYYIVVICYIYFTRVV 853
            + DL+  +   N+    S +  I S  +  QY+L F NC      Q+    + V     N EG      +LSA +  L ++Y + S  +      W+ VL +   +VF+IH+ M              + +  +I   G    G  V+ Y+   LKG  LF  I LIG+GW+F+K  L DKEKK+  IVIPLQV+AN+A +VI+       D+  WK+              FP+VWSI++L++A+ TDGK A+NL KL LFR YY++VICYIYFTR++
Sbjct:  222 EKDLVLGLGHLNDSYNFSFHIVIGSRAEEGQYSLNFHNCYNTIPGQEQPFDLTVMIREKNPEG------FLSAAEIPLFKLYLIMSACFLAAGIFWVSVLCKNTYSVFKIHWLMAALAFTKSVSLLFHSINYYFINSQGHPIEGLAVMHYITHLLKGALLFITIALIGSGWAFVKYMLSDKEKKIFGIVIPLQVLANVAYIVIESREEGASDYGLWKEILFLVDLICCGAILFPVVWSIRHLQDASGTDGKVAMNLAKLKLFRHYYVMVICYIYFTRII 494          
BLAST of CK936892 vs. ExPASy Swiss-Prot
Match: GP108_BOVIN (Protein GPR108 OS=Bos taurus GN=GPR108 PE=2 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 2.985e-41
Identity = 100/282 (35.46%), Postives = 146/282 (51.77%), Query Frame = 2
Query:   41 DLIKHVFTFNNLNGKSEYNTIYSENDADQYTLVFANCLQQLKVSMDVRSAMYNLE---GRSNNRDYLSAGKTILPRIYFLFSLIYFTLAGLWIHVLYRKRLTVFRIHFFMXXXXXXXXXXXXCEAEDKSYIKRTGSA-HGWDVLFYMFSFLKGITLFTLIVLIGTGWSFLKPYLQDKEKKVLMIVIPLQVVANIAQVVIDETGPYGQDWITWKQXXXXXXXXXXXXXXFPIVWSIKNLREAARTDGKAAVNLMKLTLFRQYYIVVICYIYFTRVVVYGLETI 874
            +L+  +   NN    S +  I S  +  QY L F NC      S+  R   +++       N   YLSA +  L ++Y + S  +      W+ +L +    VF+IH+ M              + +  +I   G    G  V+ Y+   LKG  LF  I LIG+GW+F+K  L DKEKK+  IVIPLQV+AN+A +V++       D+  WK+              FP+VWSI++L++A+ TDGK AVNL KL LFR YY++VICYIYFTR++   L  +
Sbjct:  196 ELVLGLGHLNNSYNFSFHVVIGSRAEEGQYNLNFHNCDN----SVPGREQPFDITVMIREKNPEGYLSAAEIPLFKLYMVMSACFLGAGIFWVSILCKNTYNVFKIHWLMAALTFTKSVSLLFHSINYYFINSQGHPIEGLAVMHYITHLLKGALLFITIALIGSGWAFVKYVLSDKEKKIFGIVIPLQVLANVAYIVMESREEGASDYGIWKEILFLVDLICCGTILFPVVWSIRHLQDASGTDGKVAVNLAKLKLFRHYYVMVICYIYFTRIIAILLRAV 473          
BLAST of CK936892 vs. ExPASy Swiss-Prot
Match: GP108_MOUSE (Protein GPR108 OS=Mus musculus GN=Gpr108 PE=2 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 6.650e-41
Identity = 101/284 (35.56%), Postives = 148/284 (52.11%), Query Frame = 2
Query:   35 QSDLIKHVFTFNNLNGKSEYNTIYSENDADQYTLVFANCL-----QQLKVSMDVRSAMYNLEGRSNNRDYLSAGKTILPRIYFLFSLIYFTLAGLWIHVLYRKRLTVFRIHFFMXXXXXXXXXXXXCEAEDKSYIKRTGSA-HGWDVLFYMFSFLKGITLFTLIVLIGTGWSFLKPYLQDKEKKVLMIVIPLQVVANIAQVVIDETGPYGQDWITWKQXXXXXXXXXXXXXXFPIVWSIKNLREAARTDGKAAVNLMKLTLFRQYYIVVICYIYFTRVVVYGLE 868
            + D +  +   N+    S +  I S  +  QY+L F NC      Q+    + V     N EG      +LSA +  L ++Y + S  +      W+ VL +   +VF+IH+ M              + +  +I   G    G  V+ Y+   LKG  LF  I LIG+GW+F+K  L DKEKK+  IVIPLQV+AN+A +VI+       D+  WK+              FP+VWSI++L++A+ TDGK AVNL +L LFR YY++VICYIYFTR++   L+
Sbjct:  215 EKDQVLGLGHLNDSYNFSFHIVISSRAEEGQYSLNFHNCHNSIPGQEQPFDLTVMIREKNPEG------FLSAAEIPLFKLYLIMSACFLAADIFWVSVLCKNTYSVFKIHWLMAALAFTKSVSLLFHSINYYFINSQGHPIEGLAVMHYITHLLKGALLFITIALIGSGWAFVKYMLSDKEKKIFGIVIPLQVLANVAYIVIESREEGASDYGLWKEILFLVDLICCGAILFPVVWSIRHLQDASGTDGKVAVNLARLKLFRHYYVMVICYIYFTRIIAILLQ 492          
The following BLAST results are available for this feature:
BLAST of CK936892 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
GP107_MOUSE1.579e-5038.55Protein GPR107 OS=Mus musculus GN=Gpr107 PE=2 SV=2[more]
GP107_HUMAN5.812e-4533.44Protein GPR107 OS=Homo sapiens GN=GPR107 PE=2 SV=1[more]
GP108_HUMAN1.870e-4335.94Protein GPR108 OS=Homo sapiens GN=GPR108 PE=2 SV=2[more]
GP108_RAT7.856e-4236.20Protein GPR108 OS=Rattus norvegicus GN=Gpr108 PE=2... [more]
GP108_BOVIN2.985e-4135.46Protein GPR108 OS=Bos taurus GN=GPR108 PE=2 SV=1[more]
GP108_MOUSE6.650e-4135.56Protein GPR108 OS=Mus musculus GN=Gpr108 PE=2 SV=1[more]
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Properties
Property NameValue
Genbank descriptionCGF1004516_G09 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0002_IIIF_G09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK936892 ID=CK936892; Name=CK936892; organism=Citrus sinensis; type=EST; length=879bp
GGGGCTCGAAGACGGAGAGATCACGTGCGCTCTCCAGTCCGATCTAATCA
AACACGTCTTCACCTTCAACAACCTCAACGGCAAATCCGAGTACAACACC
ATCTATTCCGAGAACGACGCCGATCAATACACGCTCGTTTTCGCCAATTG
TCTCCAGCAACTCAAAGTCTCCATGGACGTCAGATCCGCCATGTACAATC
TCGAAGGAAGATCCAACAATCGCGATTACCTCTCCGCCGGCAAGACGATT
CTGCCTAGGATCTATTTCCTCTTCTCCCTAATCTACTTCACCCTCGCCGG
TCTCTGGATCCACGTCCTTTACAGGAAACGACTCACTGTTTTCCGCATCC
ACTTTTTCATGCTCGCCGTCGTGGTCCTCAAAGCGGTGAACCTCTTGTGC
GAGGCCGAAGATAAATCGTACATCAAACGCACCGGCAGCGCCCACGGCTG
GGACGTCTTGTTTTACATGTTCAGTTTCCTGAAAGGAATCACGCTTTTCA
CGTTGATCGTTTTGATCGGTACAGGATGGTCCTTTTTGAAGCCGTATCTG
CAGGATAAAGAGAAGAAAGTCCTGATGATCGTGATCCCACTCCAGGTCGT
TGCTAATATTGCGCAGGTGGTTATTGATGAAACGGGCCCGTATGGTCAGG
ATTGGATCACGTGGAAGCAAGTATTCTTGCTTGTGGATGTTGTGTGTTGC
TGTGCCGTTTTGTTCCCCATCGTTTGGTCGATCAAGAACCTGCGTGAGGC
TGCCAGGACTGACGGCAAAGCTGCAGTTAATTTGATGAAGCTCACATTGT
TCAGGCAGTACTATATTGTGGTTATCTGCTACATTTACTTTACTCGGGTG
GTGGTCTATGGACTTGAGACTATTACTTC
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