EL492608

Overview
NameEL492608
Unique NameEL492608
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length307
Libraries
Library NameType
Citrus sinensis flesh cDNA-AFLP Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EL492608 vs. ExPASy Swiss-Prot
Match: TXD17_MOUSE (Thioredoxin domain-containing protein 17 OS=Mus musculus GN=Txndc17 PE=1 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 9.784e-11
Identity = 28/61 (45.90%), Postives = 40/61 (65.57%), Query Frame = 3 
Query:   30 SWCPDCVRAEPVIYKTLEASPDDIALLQAYVGDRPTWRNPQHPFRVDSRFKLTGVPTLFRW 212
            SWCPDCV AEPVI + L+   +D   +   VGD+P W++P + FR   + K+T VPTL ++
Sbjct:   41 SWCPDCVEAEPVIREGLKHVTEDCVFIYCQVGDKPYWKDPNNDFR--QKLKITAVPTLLKY 99
The following BLAST results are available for this feature:
BLAST of EL492608 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
TXD17_MOUSE9.784e-1145.90Thioredoxin domain-containing protein 17 OS=Mus mu... [more]
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Properties
Property NameValue
Genbank descriptionC4131 Citrus sinensis flesh cDNA-AFLP Library Citrus sinensis cDNA clone ClC4131, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EL492608 ID=EL492608; Name=EL492608; organism=Citrus sinensis; type=EST; length=307bp
GACTGCGTAGTGATCCCTCTACTTCTCTCAGCTGGTGCCCTGATTGCGTG
AGAGCTGAACCTGTAATCTACAAAACCCTGGAAGCTTCACCAGATGACAT
CGCACTGCTGCAGGCTTATGTTGGGGATAGACCAACATGGAGGAATCCTC
AGCACCCATTCAGGGTTGATTCAAGGTTCAAACTGACGGGAGTTCCGACA
CTCTTCCGCTGGGAAAATGACACAGTCAGCGGTCGTCTTGAAGACCATGA
AGCCCATCTCGAGCACAAAATCAAAGCCCTTCTTTCTGCCGATTACTCAG
GACTCAT
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