CX675203
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX675203 vs. ExPASy Swiss-Prot
Match: RL9_ORYSJ (60S ribosomal protein L9 OS=Oryza sativa subsp. japonica GN=RPL9 PE=2 SV=3) HSP 1 Score: 221.476 bits (563), Expect = 2.362e-57 Identity = 108/124 (87.10%), Postives = 120/124 (96.77%), Query Frame = 1 Query: 1 RKTSAAIRTALSHVQNLITGVTKGYRYKMRFVYAHFPINASIANADKSIEIRNFLGEKKVRRVEMLDGVTVLRSDKVKDELILDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVIEKGTI 372 R+T AAIRTA+SHVQNLITGVTKGYRYKMRFVYAHFPINASI N++ +IEIRNFLGEKKVR+V+ML+GVT+LRS+KVKDEL+LDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYV +KGTI Sbjct: 63 RRTMAAIRTAISHVQNLITGVTKGYRYKMRFVYAHFPINASITNSNTAIEIRNFLGEKKVRKVDMLEGVTILRSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSDKGTI 186
BLAST of CX675203 vs. ExPASy Swiss-Prot
Match: RL9_PEA (60S ribosomal protein L9 OS=Pisum sativum GN=RPL9 PE=2 SV=1) HSP 1 Score: 216.468 bits (550), Expect = 7.599e-56 Identity = 106/128 (82.81%), Postives = 120/128 (93.75%), Query Frame = 1 Query: 1 RKTSAAIRTALSHVQNLITGVTKGYRYKMRFVYAHFPINASIANADKSIEIRNFLGEKKVRRVEMLDGVTVLRSDKVKDELILDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVIEKGTIVGED 384 RKTSAAIRTALSHV+NLITGVTKG+RYKMRFVYA FPINASI N +KSIEIRNFLGEKKVR+V++LDGV+++RS+KVKDE++LDGNDIELVSRS ALINQKCHVK KDIRKFLDGIYV EKG +V E+ Sbjct: 66 RKTSAAIRTALSHVENLITGVTKGFRYKMRFVYADFPINASITNDNKSIEIRNFLGEKKVRKVDLLDGVSIIRSEKVKDEVVLDGNDIELVSRSCALINQKCHVKKKDIRKFLDGIYVSEKGAVVVEE 193
BLAST of CX675203 vs. ExPASy Swiss-Prot
Match: RL91_ARATH (60S ribosomal protein L9-1 OS=Arabidopsis thaliana GN=RPL9B PE=2 SV=3) HSP 1 Score: 214.157 bits (544), Expect = 3.772e-55 Identity = 106/128 (82.81%), Postives = 117/128 (91.41%), Query Frame = 1 Query: 1 RKTSAAIRTALSHVQNLITGVTKGYRYKMRFVYAHFPINASIANADKSIEIRNFLGEKKVRRVEMLDGVTVLRSDKVKDELILDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVIEKGTIVGED 384 RKTSA+IRTALSHV NLI+GVT+G+RYKMRFVYAHFPINASI KSIEIRNFLGEKKVR+VEMLDGVT++RS+KVKDE++LDGNDIELVSRS ALINQKCHVK KDIRKFLDGIYV EK IV E+ Sbjct: 67 RKTSASIRTALSHVDNLISGVTRGFRYKMRFVYAHFPINASIGGDGKSIEIRNFLGEKKVRKVEMLDGVTIVRSEKVKDEIVLDGNDIELVSRSCALINQKCHVKKKDIRKFLDGIYVSEKSKIVEEE 194
BLAST of CX675203 vs. ExPASy Swiss-Prot
Match: RL92_ARATH (60S ribosomal protein L9-2 OS=Arabidopsis thaliana GN=RPL9D PE=2 SV=1) HSP 1 Score: 206.453 bits (524), Expect = 7.864e-53 Identity = 103/128 (80.47%), Postives = 115/128 (89.84%), Query Frame = 1 Query: 1 RKTSAAIRTALSHVQNLITGVTKGYRYKMRFVYAHFPINASIANADKSIEIRNFLGEKKVRRVEMLDGVTVLRSDKVKDELILDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVIEKGTIVGED 384 RKTSA+IRTALSHV NLI GVT+G+ Y+MRFVYAHFPINASI +KSIEIRNFLGEKKVR+VEMLDGV ++RS+KVKDE+IL+GNDIELVSRS ALINQKCHVK KDIRKFLDGIYV EKG I E+ Sbjct: 67 RKTSASIRTALSHVDNLIAGVTQGFLYRMRFVYAHFPINASIDGNNKSIEIRNFLGEKKVRKVEMLDGVKIVRSEKVKDEIILEGNDIELVSRSCALINQKCHVKKKDIRKFLDGIYVSEKGKIAVEE 194
BLAST of CX675203 vs. ExPASy Swiss-Prot
Match: RL9_ICTPU (60S ribosomal protein L9 OS=Ictalurus punctatus GN=rpl9 PE=2 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 2.221e-39 Identity = 84/125 (67.20%), Postives = 92/125 (73.60%), Query Frame = 1 Query: 1 RKTSAAIRTALSHVQNLITGVTKGYRYKMRFVYAHFPINASIANADKSIEIRNFLGEKKVRRVEMLDGVTVLRSDKVKDELILDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVIEKGTIV 375 RK A +RT SHVQN+I GVT G+RYKMR VYAHFPIN I +EIRNFLGEK +RRV M GV S KDEL+L+GNDIELVS SAALI Q VKNKDIRKFLDGIYV EKGT+V Sbjct: 64 RKELATVRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQETGSLVEIRNFLGEKYIRRVRMRPGVNCALSAAQKDELVLEGNDIELVSNSAALIQQATTVKNKDIRKFLDGIYVSEKGTVV 188
BLAST of CX675203 vs. ExPASy Swiss-Prot
Match: RL9_MACFA (60S ribosomal protein L9 OS=Macaca fascicularis GN=RPL9 PE=2 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 4.949e-39 Identity = 86/128 (67.19%), Postives = 92/128 (71.88%), Query Frame = 1 Query: 1 RKTSAAIRTALSHVQNLITGVTKGYRYKMRFVYAHFPINASIANADKSIEIRNFLGEKKVRRVEMLDGVTVLRSDKVKDELILDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVIEKGTIVGED 384 RK A IRT SHVQN+I GVT G+RYKMR VYAHFPIN I +EIRNFLGEK +RRV M GV S KDELIL+GNDIELVS SAALI Q VKNKDIRKFLDGIYV EKGT+ D Sbjct: 64 RKELATIRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQENGSLVEIRNFLGEKYIRRVRMRPGVACSVSQAQKDELILEGNDIELVSNSAALIQQATTVKNKDIRKFLDGIYVSEKGTVQQAD 191
BLAST of CX675203 vs. ExPASy Swiss-Prot
Match: RL9_RAT (60S ribosomal protein L9 OS=Rattus norvegicus GN=Rpl9 PE=1 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 6.463e-39 Identity = 85/128 (66.41%), Postives = 92/128 (71.88%), Query Frame = 1 Query: 1 RKTSAAIRTALSHVQNLITGVTKGYRYKMRFVYAHFPINASIANADKSIEIRNFLGEKKVRRVEMLDGVTVLRSDKVKDELILDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVIEKGTIVGED 384 RK A +RT SHVQN+I GVT G+RYKMR VYAHFPIN I +EIRNFLGEK +RRV M GV S KDELIL+GNDIELVS SAALI Q VKNKDIRKFLDGIYV EKGT+ D Sbjct: 64 RKELATVRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQENGSLVEIRNFLGEKYIRRVRMRTGVACSVSQAQKDELILEGNDIELVSNSAALIQQATTVKNKDIRKFLDGIYVSEKGTVQQPD 191
BLAST of CX675203 vs. ExPASy Swiss-Prot
Match: RL9_MOUSE (60S ribosomal protein L9 OS=Mus musculus GN=Rpl9 PE=2 SV=2) HSP 1 Score: 160.229 bits (404), Expect = 6.463e-39 Identity = 85/128 (66.41%), Postives = 92/128 (71.88%), Query Frame = 1 Query: 1 RKTSAAIRTALSHVQNLITGVTKGYRYKMRFVYAHFPINASIANADKSIEIRNFLGEKKVRRVEMLDGVTVLRSDKVKDELILDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVIEKGTIVGED 384 RK A +RT SHVQN+I GVT G+RYKMR VYAHFPIN I +EIRNFLGEK +RRV M GV S KDELIL+GNDIELVS SAALI Q VKNKDIRKFLDGIYV EKGT+ D Sbjct: 64 RKELATVRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQENGSLVEIRNFLGEKYIRRVRMRTGVACSVSQAQKDELILEGNDIELVSNSAALIQQATTVKNKDIRKFLDGIYVSEKGTVQQAD 191
BLAST of CX675203 vs. ExPASy Swiss-Prot
Match: RL9_HUMAN (60S ribosomal protein L9 OS=Homo sapiens GN=RPL9 PE=1 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 6.463e-39 Identity = 85/128 (66.41%), Postives = 92/128 (71.88%), Query Frame = 1 Query: 1 RKTSAAIRTALSHVQNLITGVTKGYRYKMRFVYAHFPINASIANADKSIEIRNFLGEKKVRRVEMLDGVTVLRSDKVKDELILDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVIEKGTIVGED 384 RK A +RT SHVQN+I GVT G+RYKMR VYAHFPIN I +EIRNFLGEK +RRV M GV S KDELIL+GNDIELVS SAALI Q VKNKDIRKFLDGIYV EKGT+ D Sbjct: 64 RKELATVRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQENGSLVEIRNFLGEKYIRRVRMRPGVACSVSQAQKDELILEGNDIELVSNSAALIQQATTVKNKDIRKFLDGIYVSEKGTVQQAD 191
BLAST of CX675203 vs. ExPASy Swiss-Prot
Match: RL9_BOVIN (60S ribosomal protein L9 OS=Bos taurus GN=RPL9 PE=2 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 6.463e-39 Identity = 85/128 (66.41%), Postives = 92/128 (71.88%), Query Frame = 1 Query: 1 RKTSAAIRTALSHVQNLITGVTKGYRYKMRFVYAHFPINASIANADKSIEIRNFLGEKKVRRVEMLDGVTVLRSDKVKDELILDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVIEKGTIVGED 384 RK A +RT SHVQN+I GVT G+RYKMR VYAHFPIN I +EIRNFLGEK +RRV M GV S KDELIL+GNDIELVS SAALI Q VKNKDIRKFLDGIYV EKGT+ D Sbjct: 64 RKELATVRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQENGSLVEIRNFLGEKYIRRVRMRPGVACSVSQAQKDELILEGNDIELVSNSAALIQQATTVKNKDIRKFLDGIYVSEKGTVQQAD 191 The following BLAST results are available for this feature:
BLAST of CX675203 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 61
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Sequences
The
following sequences are available for this feature:
EST sequence >CX675203 ID=CX675203; Name=CX675203; organism=Citrus sinensis; type=EST; length=570bpback to top |