CK936844

Overview
NameCK936844
Unique NameCK936844
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length793
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1972 contig Csv1_Contig1972:1..793. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK936844 vs. ExPASy Swiss-Prot
Match: QKIL5_ARATH (KH domain-containing protein At1g09660 OS=Arabidopsis thaliana GN=At1g09660 PE=2 SV=1)

HSP 1 Score: 312.383 bits (799), Expect = 1.856e-84
Identity = 152/216 (70.37%), Postives = 176/216 (81.48%), Query Frame = 1
Query:  139 MGERLTPGSYFQYPPSGVHASPHRSSSLPLDRERYLAELLAERQKLGPFVQVLPLCSRLLSQEIRRITGYNPSFVDHERFEHDSPFRSLGQPNGRPMDLEGLSAMQTEENGHLQRMAPFQTPPSMGWQGIPGIPTTPVVKRVIRLDVPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLKDKPGYEHLNEPLHVLVEA 786
            M ER++PGS+FQYP SG  ASP+RS   P DRERYL ELL ERQKLGPF+QV+P C RLL+ EIRR++    SF D +R+EH SPFRSLGQP    +DLEG S MQ EEN HLQR +PF+ P  +GW G+PG+P  P+VK+VIRLDVPVDKYP++NFVGRILGPRGNSLKRVE  T CRVFIRGRGSVKD++KEEKLK KPGYEHL EPLHVL+EA
Sbjct:   11 MEERISPGSFFQYPLSGFRASPNRSPCPPSDRERYLTELLQERQKLGPFLQVMPNCCRLLNHEIRRVS----SFPDLDRYEHGSPFRSLGQPTNGKLDLEGWSMMQAEENCHLQRASPFRGPSPVGWIGMPGLPNPPIVKKVIRLDVPVDKYPSYNFVGRILGPRGNSLKRVELATHCRVFIRGRGSVKDTVKEEKLKGKPGYEHLCEPLHVLIEA 222          
BLAST of CK936844 vs. ExPASy Swiss-Prot
Match: QKIL4_ARATH (KH domain-containing protein At3g08620 OS=Arabidopsis thaliana GN=At3g08620 PE=2 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 1.297e-53
Identity = 116/214 (54.21%), Postives = 144/214 (67.29%), Query Frame = 1
Query:  163 SYFQYPPSGVHASPHRSSSLPLDRERYLAELLAERQKLGPFVQVLPLCSRLLSQEIRRITGYNPS--FVDHERFEHDSPFRSLGQPNGRPM----DLEGLSAMQTEENGHLQRMAPFQTPPSMGWQGIPGIPTTPVVKRVIRLDVPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLKDKPGYEHLNEPLHVLVEA 786
            +Y  + PS   +   R+ S  +D + Y+++LLAE QKLGPF+QVLP+CSRLL+QEI RITG  P+  F D +R  H SP   +  PN         L G + +  E  G    MA       M WQG P  P++  VKR++RLD+PVD YPNFNFVGR+LGPRGNSLKRVEA T CRV+IRG+GS+KD  KEEKLK KPGYEHLNE LH+L+EA
Sbjct:    6 NYNNFSPSRAASPQIRTPSSDVDSQ-YISQLLAEHQKLGPFMQVLPICSRLLNQEIFRITGMMPNQGFTDFDRLRHRSP-SPMASPNLMSNVSGGGLGGWNGLPPERIGGPHGMA-------MEWQGAPASPSSYPVKRILRLDLPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPEKEEKLKGKPGYEHLNEQLHILIEA 210          
BLAST of CK936844 vs. ExPASy Swiss-Prot
Match: QKIL3_ARATH (KH domain-containing protein At2g38610 OS=Arabidopsis thaliana GN=At2g38610 PE=1 SV=1)

HSP 1 Score: 207.223 bits (526), Expect = 8.409e-53
Identity = 108/199 (54.27%), Postives = 134/199 (67.34%), Query Frame = 1
Query:  196 ASPHRSSSLPLDRERYLAELLAERQKLGPFVQVLPLCSRLLSQEIRRITGY--NPSFVDHERFEHDSPFRSLGQPNGRPMDLEGLSAMQTEENGHLQRMAPFQTPPSMGWQGIPGIPTTPVVKRVIRLDVPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLKDKPGYEHLNEPLHVLVEA 786
            ASP   S+  +D  +YL ELLAE QKL PF+QVLP+CSRLL+QE+ R++G   N  F D +R  H SP           +   GL       NG  Q         +M WQG PG P++  VKR++RL++PVD YPNFNFVGR+LGPRGNSLKRVEA T CRVFIRG+GS+KD  KE+KL+ +PGYEHLNE LH+L+EA
Sbjct:   17 ASPQIRSTPEIDSSQYLTELLAEHQKLTPFMQVLPICSRLLNQEMFRVSGMMSNQGFGDFDRLRHRSPSPMASSNLMSNVSNTGLGGW----NGLSQERLSGTPGMTMDWQGAPGSPSSYTVKRILRLEIPVDNYPNFNFVGRLLGPRGNSLKRVEATTGCRVFIRGKGSIKDPEKEDKLRGRPGYEHLNEQLHILIEA 211          
BLAST of CK936844 vs. ExPASy Swiss-Prot
Match: QKIL1_ARATH (KH domain-containing protein At4g26475 OS=Arabidopsis thaliana GN=At4g26475 PE=2 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 1.343e-50
Identity = 107/220 (48.64%), Postives = 138/220 (62.73%), Query Frame = 1
Query:  160 GSYFQYPPS-----GVHASPHRSSSLP------LDRERYLAELLAERQKLGPFVQVLPLCSRLLSQEIRRITGYNPSFVDHERFEHDSPFRSLGQPNGRPMDLEGLSAMQTEENGHLQRMAPFQTPPSMGWQGIPGIPTTPVVKRVIRLDVPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLKDKPGYEHLNEPLHVLVEA 786
            G +  YPP          SP+ S  L       +++E+YL+ELLAER KL PF+ VLP   RL++QEI R+T    + +   RF+H SP  S G       D+ G ++    E           + P+  W   PG  +  +VKR IR+D+PVDKYPN+NFVGR+LGPRGNSLKRVEA T+CRV IRGRGS+KD IKE+ ++ KPGYEHLNEPLH+LVEA
Sbjct:   23 GRFVTYPPPLSVPPSAPQSPNFSGGLRSQPSFLVEQEKYLSELLAERHKLTPFLPVLPHVCRLMNQEILRVTTLLENALSQSRFDHPSPLASGGIFQNSRADMNGWASQFPSERS-------VSSSPAPNWLNSPGSSSGLIVKRTIRVDIPVDKYPNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPIKEDMMRGKPGYEHLNEPLHILVEA 235          
BLAST of CK936844 vs. ExPASy Swiss-Prot
Match: QKIL2_ARATH (KH domain-containing protein At5g56140 OS=Arabidopsis thaliana GN=At5g56140 PE=2 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 1.137e-49
Identity = 112/223 (50.22%), Postives = 140/223 (62.78%), Query Frame = 1
Query:  142 GERLTPGSYFQYPPSGVHASPHRS------SSLPLDRERYLAELLAERQKLGPFVQVLPLCSRLLSQEIRRITGY--NPSFVDHERFEHDSPFRSLGQPNGRPMDLEGLSAMQTEENGHLQRMAPFQTPPSMGWQGIPGIPTTPVVKRVIRLDVPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLKDKPGYEHLNEPLHVLVEA 786
            G  +T  S    PPS    SP+ S      SS+ +++E+YL+ELLAER KL PF+ VLP   RLL+QEI R+T    N + +     +H SP  S G       D+ G ++    E     R  P  + P   W   PG  +  + KR IR+D+PVD YPNFNFVGR+LGPRGNSLKRVEA T+CRV IRGRGS+KD IKEE ++ KPGYEHLNEPLH+LVEA
Sbjct:   27 GRFMTYSSSLSVPPSAPQ-SPNYSGGLRSQSSVFVEQEKYLSELLAERHKLTPFLPVLPHAFRLLNQEILRVTTLLENATVLSQSGLDHPSPLASGGIFQNARADMNGWASQFPSE-----RSVP--SSPGPNWLNSPGSSSGLIAKRTIRVDIPVDNYPNFNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPIKEEMMRGKPGYEHLNEPLHILVEA 241          
BLAST of CK936844 vs. ExPASy Swiss-Prot
Match: QKI_RAT (Protein quaking OS=Rattus norvegicus GN=Qki PE=1 SV=2)

HSP 1 Score: 98.5969 bits (244), Expect = 4.212e-20
Identity = 44/78 (56.41%), Postives = 62/78 (79.49%), Query Frame = 1
Query:  547 PVVKRVIRLDVPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLKDKPGYEHLNEPLHVLV 780
            P+V+   +L VPV +YP+FNFVGRILGPRG + K++EA T C++ +RG+GS++D  KEE+ + KP +EHLNE LHVL+
Sbjct:   78 PIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLI 155          
BLAST of CK936844 vs. ExPASy Swiss-Prot
Match: QKI_PIG (Protein quaking OS=Sus scrofa GN=QKI PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 4.212e-20
Identity = 44/78 (56.41%), Postives = 62/78 (79.49%), Query Frame = 1
Query:  547 PVVKRVIRLDVPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLKDKPGYEHLNEPLHVLV 780
            P+V+   +L VPV +YP+FNFVGRILGPRG + K++EA T C++ +RG+GS++D  KEE+ + KP +EHLNE LHVL+
Sbjct:   78 PIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLI 155          
BLAST of CK936844 vs. ExPASy Swiss-Prot
Match: QKI_MOUSE (Protein quaking OS=Mus musculus GN=Qki PE=1 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 4.212e-20
Identity = 44/78 (56.41%), Postives = 62/78 (79.49%), Query Frame = 1
Query:  547 PVVKRVIRLDVPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLKDKPGYEHLNEPLHVLV 780
            P+V+   +L VPV +YP+FNFVGRILGPRG + K++EA T C++ +RG+GS++D  KEE+ + KP +EHLNE LHVL+
Sbjct:   78 PIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLI 155          
BLAST of CK936844 vs. ExPASy Swiss-Prot
Match: QKI_HUMAN (Protein quaking OS=Homo sapiens GN=QKI PE=1 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 4.212e-20
Identity = 44/78 (56.41%), Postives = 62/78 (79.49%), Query Frame = 1
Query:  547 PVVKRVIRLDVPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLKDKPGYEHLNEPLHVLV 780
            P+V+   +L VPV +YP+FNFVGRILGPRG + K++EA T C++ +RG+GS++D  KEE+ + KP +EHLNE LHVL+
Sbjct:   78 PIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLI 155          
BLAST of CK936844 vs. ExPASy Swiss-Prot
Match: QKI_HORSE (Protein quaking OS=Equus caballus GN=QKI PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 4.212e-20
Identity = 44/78 (56.41%), Postives = 62/78 (79.49%), Query Frame = 1
Query:  547 PVVKRVIRLDVPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLKDKPGYEHLNEPLHVLV 780
            P+V+   +L VPV +YP+FNFVGRILGPRG + K++EA T C++ +RG+GS++D  KEE+ + KP +EHLNE LHVL+
Sbjct:   78 PIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLI 155          
The following BLAST results are available for this feature:
BLAST of CK936844 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 35
Match NameE-valueIdentityDescription
QKIL5_ARATH1.856e-8470.37KH domain-containing protein At1g09660 OS=Arabidop... [more]
QKIL4_ARATH1.297e-5354.21KH domain-containing protein At3g08620 OS=Arabidop... [more]
QKIL3_ARATH8.409e-5354.27KH domain-containing protein At2g38610 OS=Arabidop... [more]
QKIL1_ARATH1.343e-5048.64KH domain-containing protein At4g26475 OS=Arabidop... [more]
QKIL2_ARATH1.137e-4950.22KH domain-containing protein At5g56140 OS=Arabidop... [more]
QKI_RAT4.212e-2056.41Protein quaking OS=Rattus norvegicus GN=Qki PE=1 S... [more]
QKI_PIG4.212e-2056.41Protein quaking OS=Sus scrofa GN=QKI PE=2 SV=1[more]
QKI_MOUSE4.212e-2056.41Protein quaking OS=Mus musculus GN=Qki PE=1 SV=1[more]
QKI_HUMAN4.212e-2056.41Protein quaking OS=Homo sapiens GN=QKI PE=1 SV=1[more]
QKI_HORSE4.212e-2056.41Protein quaking OS=Equus caballus GN=QKI PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCGF1004517_D03 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0002_IVF_D03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK936844 ID=CK936844; Name=CK936844; organism=Citrus sinensis; type=EST; length=793bp
GCGGGGGAGGCANNNACAGGGACTCAAAACACGACACTACTCTTTCATCC
CCCATCTCCATCTCCATCTCCACCTCCACCTCCACCTCCACCGCCTCTCT
CTCCTTCCCATTCCGACCACCACCATCATCATAATCGAATGGGAGAGAGA
CTCACCCCTGGAAGTTACTTCCAGTACCCTCCTTCAGGAGTTCACGCTTC
TCCTCATAGGTCTTCTTCTTTGCCTTTAGATCGTGAAAGGTATTTGGCTG
AATTATTGGCAGAAAGGCAAAAGTTAGGACCATTTGTCCAAGTTTTGCCT
CTATGCAGCAGGCTTCTCAGTCAAGAAATCAGACGAATAACGGGTTACAA
TCCAAGTTTTGTTGATCATGAAAGGTTTGAGCATGATAGCCCATTTAGGT
CGTTAGGTCAGCCAAATGGAAGACCAATGGATTTGGAGGGTTTGTCTGCA
ATGCAAACTGAGGAAAATGGGCACCTTCAAAGAATGGCCCCTTTTCAAAC
TCCTCCTTCAATGGGCTGGCAAGGTATTCCTGGAATTCCAACCACACCTG
TTGTAAAGAGAGTTATTAGACTTGATGTTCCTGTGGATAAATATCCAAAT
TTTAATTTTGTCGGCCGGATTTTGGGACCGCGTGGGAACTCGCTCAAAAG
AGTCGAAGCCATGACAGAATGTAGGGTGTTCATTAGAGGCCGGGGTTCAG
TCAAGGATTCAATAAAGGAAGAAAAACTTAAAGATAAACCTGGATATGAG
CATCTTAATGAGCCACTGCACGTGTTAGTGGAGGCCGANTTTN
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