EY665837

Overview
NameEY665837
Unique NameEY665837
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length878
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY665837 vs. ExPASy Swiss-Prot
Match: Y5520_ARATH (Uncharacterized aarF domain-containing protein kinase At5g05200, chloroplastic OS=Arabidopsis thaliana GN=At5g05200 PE=1 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.482e-40
Identity = 106/215 (49.30%), Postives = 127/215 (59.07%), Query Frame = 2 
Query:   44 MAISAFRGTRLPLLHPPQLPAVRGVPSGLRKF----NYRSKRFTLLAQYSQTQDLFSSRLQNSIENLPKLVEDIVQTSINTGPRGAIRLAQGIQAFVGVGSEWLTDVSKSRSSTSGLPTEXXXXXXXXXXXXXXFERMGATY-*IGPAYSIFSHLIPLQNMLRNFRTVLIELLQFPFWRDKKDFCLRI*EGP*KSVYEYG*PNTRLAQPPVTQGH 673
            MA+SAFRGTRLPL H  Q P  R V    +K     N+  K F L AQYSQTQDLF+SRLQ+ IE LPKLVEDIVQTSINTGPRG  RL QG+QAFVGVG EWL D+SKS S++ GLP+E              FERMGATY  +G   +    L P    ++ F+    +    PF   +K     +   P +SVYEY  P T +A   + Q H
Sbjct:    1 MAVSAFRGTRLPLFHHSQFPVARTVSGTSKKMIGARNF--KGFVLTAQYSQTQDLFTSRLQSQIEKLPKLVEDIVQTSINTGPRGVTRLVQGVQAFVGVGGEWLNDLSKSTSASGGLPSELQLGLLSPLYLRKLFERMGATYIKLGQFIASAPTLFP-PEYVKEFQNCFDKAPPVPFEEIRKILQEEL-GRPIESVYEYVDP-TPIASASIAQVH 210
The following BLAST results are available for this feature:
BLAST of EY665837 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y5520_ARATH1.482e-4049.30Uncharacterized aarF domain-containing protein kin... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-102-006-B08-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665837 ID=EY665837; Name=EY665837; organism=Citrus sinensis; type=EST; length=878bp
CCACGCGTCCGCAGCTGTTGTCAAGAAAACCCGGAACGAGAAAATGGCAA
TTTCAGCATTCAGAGGCACTCGCTTGCCGTTATTGCATCCTCCTCAGTTG
CCGGCAGTTAGAGGCGTACCATCTGGATTGAGGAAGTTCAATTACCGGTC
AAAGAGATTCACTTTACTTGCTCAGTACTCACAAACACAGGATCTCTTCT
CTTCTCGCCTTCAAAATAGTATTGAGAACTTGCCCAAATTGGTGGAGGAT
ATAGTTCAGACATCTATAAACACGGGCCCACGTGGCGCTATACGACTAGC
TCAAGGGATACAAGCATTTGTTGGGGTTGGTAGCGAGTGGCTAACTGATG
TATCAAAGTCAAGAAGTTCAACCAGTGGATTACCAACTGAACTGCAGCTG
GGATTGTTGTCCCCTCTGTATTTGCGGAGATTATTTGAACGCATGGGAGC
AACTTATTAAATTGGGCCAGCTTATAGCATCTTCTCCCACCTTATTCCCC
TCCAGAATATGTTGAGGAATTTCAGAACTGTTTTGATAGAACTCCTGCAG
TTCCCATTTTGGAGAGATAAAAAGGACTTTTGCTTGAGGATTTAGGAAGG
GCCATAGAAAAGTGTTTATGAATATGGTTGACCCAACACCCGATTGGCCC
AGCCTCCCGTAACACAGGGTCATTGGTGGAAGGCTTCGGAGGTTCCCAAA
AAGGATGGTAACCTTCCAGGGCCTTGAAACCCTGGGATAAAGGGTGGATT
CAGGGGGCCAATTCAACTTTTCTCATTGCCGCTGCCCCACATATGGGACC
TTCTCGATTCCCTAACTCCGCCCGCACTATTACTGGCTGGGGTACTTACA
CAACAAAATTCCCCCACACTCCCCGTTT
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