CK936832

Overview
NameCK936832
Unique NameCK936832
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length832
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK936832 vs. ExPASy Swiss-Prot
Match: C88A1_MAIZE (Cytochrome P450 88A1 OS=Zea mays GN=CYP88A1 PE=2 SV=1)

HSP 1 Score: 58.9214 bits (141), Expect = 1.393e-15
Identity = 35/91 (38.46%), Postives = 49/91 (53.85%), Query Frame = 1
Query:  262 ARDMLGEILQPVLNERRAMKSDEQKGRKG----LIDLLMEVEDENGTKXXXXXXXXXXXSFLSAGHESSAHIATWALIHLHKHPQTLRKAK 522
            AR  L  +LQ VL+ERRA ++   KG  G    ++D L+E +DE G              +L+AGHESS HI  WA + L ++P    +AK
Sbjct:  268 ARRRLVAVLQGVLDERRAARA---KGVSGGGVDMMDRLIEAQDERGRHLDDDEIIDVLVMYLNAGHESSGHITMWATVFLQENPDMFARAK 355          

HSP 2 Score: 37.7354 bits (86), Expect = 1.393e-15
Identity = 15/37 (40.54%), Postives = 28/37 (75.68%), Query Frame = 3
Query:  591 LISTRQEEQEDIIKKRPSTQKGLTIEEIKQMEYLAKV 701
            + +  + EQE I++  PS+Q+GLT+ + ++MEYL++V
Sbjct:  350 MFARAKAEQEAIMRSIPSSQRGLTLRDFRKMEYLSQV 386          

HSP 3 Score: 26.5646 bits (57), Expect = 1.393e-15
Identity = 12/21 (57.14%), Postives = 17/21 (80.95%), Query Frame = 1
Query:  769 VTQVIAETLRMTNLSPSSFRE 831
            ++QVI ETLR+ N+S  SFR+
Sbjct:  383 LSQVIDETLRLVNISFVSFRQ 403          
BLAST of CK936832 vs. ExPASy Swiss-Prot
Match: KAO1_ARATH (Ent-kaurenoic acid oxidase 1 OS=Arabidopsis thaliana GN=KAO1 PE=2 SV=1)

HSP 1 Score: 59.3066 bits (142), Expect = 3.026e-15
Identity = 31/88 (35.23%), Postives = 47/88 (53.41%), Query Frame = 1
Query:  262 ARDMLGEILQPVLNERRAM-KSDEQKGRKGLIDLLMEVEDENGTKXXXXXXXXXXXSFLSAGHESSAHIATWALIHLHKHPQTLRKAK 522
            AR  L    Q ++ ERR   K +    +K ++D L+ V+DE+G              +L+AGHESS H   WA + L +HP+ L++AK
Sbjct:  240 ARKTLVAAFQSIVTERRNQRKQNILSNKKDMLDNLLNVKDEDGKTLDDEEIIDVLLMYLNAGHESSGHTIMWATVFLQEHPEVLQRAK 327          

HSP 2 Score: 38.891 bits (89), Expect = 3.026e-15
Identity = 16/38 (42.11%), Postives = 29/38 (76.32%), Query Frame = 3
Query:  588 KLISTRQEEQEDIIKKRPSTQKGLTIEEIKQMEYLAKV 701
            +++   + EQE I+K RP  QKGL+++E ++ME+L++V
Sbjct:  321 EVLQRAKAEQEMILKSRPEGQKGLSLKETRKMEFLSQV 358          

HSP 3 Score: 23.8682 bits (50), Expect = 3.026e-15
Identity = 10/21 (47.62%), Postives = 16/21 (76.19%), Query Frame = 1
Query:  769 VTQVIAETLRMTNLSPSSFRE 831
            ++QV+ ETLR+   S ++FRE
Sbjct:  355 LSQVVDETLRVITFSLTAFRE 375          
BLAST of CK936832 vs. ExPASy Swiss-Prot
Match: KAO1_HORVU (Ent-kaurenoic acid oxidase 1 OS=Hordeum vulgare GN=KAO1 PE=1 SV=1)

HSP 1 Score: 61.2326 bits (147), Expect = 5.062e-15
Identity = 36/90 (40.00%), Postives = 47/90 (52.22%), Query Frame = 1
Query:  262 ARDMLGEILQPVLNERRAMKSDEQKGRKGLIDL---LMEVEDENGTKXXXXXXXXXXXSFLSAGHESSAHIATWALIHLHKHPQTLRKAK 522
            AR  L   LQ VL+ERRA       G    +D+   L+ VEDE G +            +L+AGHESS HI  WA + L ++P+ L KAK
Sbjct:  243 ARRRLVAALQRVLDERRARGGKTAAGAAAPVDMMDRLIAVEDEGGRRLQDDEIIDVLVMYLNAGHESSGHITMWATVFLQENPEILAKAK 332          

HSP 2 Score: 34.6538 bits (78), Expect = 5.062e-15
Identity = 14/38 (36.84%), Postives = 27/38 (71.05%), Query Frame = 3
Query:  588 KLISTRQEEQEDIIKKRPSTQKGLTIEEIKQMEYLAKV 701
            ++++  + EQE I++  P  QKGLT+ + ++M YL++V
Sbjct:  326 EILAKAKAEQEAIMRSIPPGQKGLTLRDFRKMAYLSQV 363          

HSP 3 Score: 25.409 bits (54), Expect = 5.062e-15
Identity = 11/21 (52.38%), Postives = 16/21 (76.19%), Query Frame = 1
Query:  769 VTQVIAETLRMTNLSPSSFRE 831
            ++QV+ ETLR  N+S  SFR+
Sbjct:  360 LSQVVDETLRFVNISFVSFRQ 380          
BLAST of CK936832 vs. ExPASy Swiss-Prot
Match: KAO2_ARATH (Ent-kaurenoic acid oxidase 2 OS=Arabidopsis thaliana GN=KAO2 PE=2 SV=2)

HSP 1 Score: 62.3882 bits (150), Expect = 6.555e-15
Identity = 30/76 (39.47%), Postives = 42/76 (55.26%), Query Frame = 1
Query:  295 VLNERRAMKSDEQKGRKGLIDLLMEVEDENGTKXXXXXXXXXXXSFLSAGHESSAHIATWALIHLHKHPQTLRKAK 522
            V N R   K +    RK ++D L++V+DENG              +L+AGHESS H+  WA I + +HP  L+KAK
Sbjct:  251 VTNRRNQRKQNISSNRKDMLDNLIDVKDENGRVLDDEEIIDLLLMYLNAGHESSGHLTMWATILMQEHPMILQKAK 326          

HSP 2 Score: 34.2686 bits (77), Expect = 6.555e-15
Identity = 17/37 (45.95%), Postives = 27/37 (72.97%), Query Frame = 3
Query:  591 LISTRQEEQEDIIKKRPSTQKGLTIEEIKQMEYLAKV 701
            ++   +EEQE I+KKR   QK LT++E ++M YL++V
Sbjct:  321 ILQKAKEEQERIVKKRAPGQK-LTLKETREMVYLSQV 356          

HSP 3 Score: 24.2534 bits (51), Expect = 6.555e-15
Identity = 11/21 (52.38%), Postives = 16/21 (76.19%), Query Frame = 1
Query:  769 VTQVIAETLRMTNLSPSSFRE 831
            ++QVI ETLR+   S ++FRE
Sbjct:  353 LSQVIDETLRVITFSLTAFRE 373          
The following BLAST results are available for this feature:
BLAST of CK936832 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
C88A1_MAIZE1.393e-1538.46Cytochrome P450 88A1 OS=Zea mays GN=CYP88A1 PE=2 S... [more]
KAO1_ARATH3.026e-1535.23Ent-kaurenoic acid oxidase 1 OS=Arabidopsis thalia... [more]
KAO1_HORVU5.062e-1540.00Ent-kaurenoic acid oxidase 1 OS=Hordeum vulgare GN... [more]
KAO2_ARATH6.555e-1539.47Ent-kaurenoic acid oxidase 2 OS=Arabidopsis thalia... [more]
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Properties
Property NameValue
Genbank descriptionCGF1004517_D10 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0002_IVF_D10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK936832 ID=CK936832; Name=CK936832; organism=Citrus sinensis; type=EST; length=832bp
GGGGAACAAATAATAAGCTTATAGTCAATTTCAGATGCGGTTAGTTGCGG
CTTATAAATTGTGGATTTGAACTATGTCATGTTTTCTGTGGTACCGTAGA
AAAGATAACAACTAAAATCTTTACTTTATAGTAAGTTATGAGGGCTTGCG
TATTTTGTAGAAAACATAACATAATTCAAATTCACACTTTATAAACTGCA
GACACCTGATATAATAATAATTTCATAAGCATAACTAATCAATTGTTTTA
TTCTTTGTTAGGCACGAGATATGTTGGGAGAGATTCTTCAACCGGTCCTG
AATGAAAGGAGGGCAATGAAAAGTGATGAGCAAAAGGGAAGAAAGGGGTT
GATTGATTTATTGATGGAAGTTGAAGATGAGAATGGTACAAAACTGGACG
ATCTTGATATCATTGACATGCTAATCTCTTTCTTGTCAGCCGGTCATGAG
AGCTCTGCCCATATTGCAACATGGGCATTAATCCACCTACATAAGCATCC
TCAAACGCTGAGGAAAGCTAAGGTTGCTTCAACTAATAGTTGATCTAATC
CTTCAATTAACTAACAAAACTTTCATATGCATTAAATAAATTGATTTCTA
CTCGGCAGGAGGAGCAAGAGGATATTATTAAGAAAAGACCATCTACGCAA
AAAGGATTGACTATTGAGGAAATTAAACAAATGGAATATCTTGCCAAGGT
AAAATTAATTCCAATTGAAAATGTTAAAAATTTCCATCACTAATTGTATG
TAACAAATTATTTTTACTGTTACACAGGTAATAGCTGAAACATTACGCAT
GACCAATCTGTCACCGTCAAGTTTTAGAGAGG
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