CK936758

Overview
NameCK936758
Unique NameCK936758
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length677
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10142 contig Csv1_Contig10142:8..685. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK936758 vs. ExPASy Swiss-Prot
Match: GL17_ARATH (Germin-like protein subfamily 1 member 7 OS=Arabidopsis thaliana GN=At3g05950 PE=2 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 1.767e-57
Identity = 83/131 (63.36%), Postives = 102/131 (77.86%), Query Frame = 1
Query:  283 GVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIXXXFNIGKTNAAAYSALNSQFPGEVTIADAVFGANPSINPDFLGKAF 675
            G + T+ NV++IPGLNTLG+S  RID+AP GQ PPH HPRA+EI +V+EGTL VGFVTS+Q NN L +KVL  GDVFVFP G+I    N+G+TNA A++ L SQ PG +TIADAVFG+ PSI P+ L KAF
Sbjct:   77 GSNVTNVNVDKIPGLNTLGVSLVRIDFAPGGQNPPHTHPRATEILVVVEGTLLVGFVTSNQDNNRLFSKVLYPGDVFVFPIGMIHFQVNVGRTNAVAFAGLGSQNPGTITIADAVFGSKPSIMPEILAKAF 207          

HSP 2 Score: 73.1738 bits (178), Expect = 1.767e-57
Identity = 35/52 (67.31%), Postives = 39/52 (75.00%), Query Frame = 2
Query:  128 DPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRL 283
            DP  LQD CVA++D   GVFVNGKFCKDPK  +AEDFF SGL   GNT NR+
Sbjct:   26 DPSPLQDFCVAVDDAS-GVFVNGKFCKDPKYVKAEDFFTSGLNIAGNTINRV 76          
BLAST of CK936758 vs. ExPASy Swiss-Prot
Match: GL18_ARATH (Germin-like protein subfamily 1 member 8 OS=Arabidopsis thaliana GN=GLP9 PE=2 SV=2)

HSP 1 Score: 154.836 bits (390), Expect = 7.248e-56
Identity = 75/135 (55.56%), Postives = 97/135 (71.85%), Query Frame = 1
Query:  271 SKSTGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIXXXFNIGKTNAAAYSALNSQFPGEVTIADAVFGANPSINPDFLGKAF 675
            + + G + T  NV  + GLNTLGIS  RIDYAP GQ PPH HPRA+EI +V +GTL VGF++S+Q  N L AK LN GDVFVFP+GLI   FN+G T A A +AL+SQ  G +TIA+ +FG+ P ++P+ L +AF
Sbjct:   74 NNAVGSNVTTVNVNNLGGLNTLGISLVRIDYAPNGQNPPHTHPRATEILVVQQGTLLVGFISSNQDGNRLFAKTLNVGDVFVFPEGLIHFQFNLGGTPAVAIAALSSQNAGVITIANTIFGSKPDVDPNVLARAF 208          

HSP 2 Score: 84.3445 bits (207), Expect = 7.248e-56
Identity = 38/75 (50.67%), Postives = 47/75 (62.67%), Query Frame = 2
Query:   53 ITMKVIQFLIGFXXXXXXXXXXXXTDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTAN 277
            +T+K + FL               +DP  LQD CV +N P DGVFVNGKFCKDP++  A+DFFFS L +PGNT N
Sbjct:    1 MTIKSLSFLAALSLFALTLPLVIASDPSPLQDFCVGVNTPADGVFVNGKFCKDPRIVFADDFFFSSLNRPGNTNN 75          
BLAST of CK936758 vs. ExPASy Swiss-Prot
Match: GL12_ARATH (Putative germin-like protein subfamily 1 member 2 OS=Arabidopsis thaliana GN=At3g04150 PE=2 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 1.214e-52
Identity = 77/135 (57.04%), Postives = 94/135 (69.63%), Query Frame = 1
Query:  271 SKSTGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIXXXFNIGKTNAAAYSALNSQFPGEVTIADAVFGANPSINPDFLGKAF 675
            S   G   TD +V +IPGLNTLGI+  R+D+AP GQ PPHIHPRAS+I LVL+G L VGFV+S+  N TL +K+L  GDVF FP GL+    N GKT+A A   + SQ PG + I DAVFG+NP I+P  L KAF
Sbjct:   73 SNRLGASVTDVDVRRIPGLNTLGIAIARLDFAPGGQLPPHIHPRASQIILVLKGQLSVGFVSSNDYNYTLFSKILYPGDVFAFPIGLVQFHANTGKTHAVAIGVVGSQDPGVIPIGDAVFGSNPLIDPKLLAKAF 207          

HSP 2 Score: 73.9442 bits (180), Expect = 1.214e-52
Identity = 36/52 (69.23%), Postives = 39/52 (75.00%), Query Frame = 2
Query:  128 DPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRL 283
            DP  LQD CVA N   + VFVNGKFCKDPKL  A DFF+SGL  PGNT+NRL
Sbjct:   26 DPNPLQDYCVATNGT-NRVFVNGKFCKDPKLVTANDFFYSGLNIPGNTSNRL 76          
BLAST of CK936758 vs. ExPASy Swiss-Prot
Match: GL111_ARATH (Germin-like protein subfamily 1 member 11 OS=Arabidopsis thaliana GN=At5g38940 PE=2 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 1.215e-52
Identity = 82/131 (62.60%), Postives = 97/131 (74.05%), Query Frame = 1
Query:  283 GVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIXXXFNIGKTNAAAYSALNSQFPGEVTIADAVFGANPSINPDFLGKAF 675
            G   T  NV  + GLNTLGIS  RIDYA  GQ PPH HPRA+EI +V +GTL VGFVTS+  +N L +KVLN+GDVFVFP+GLI    NIGK  A A++AL+SQ PG +TIA+ VFGANP+INP  L KAF
Sbjct:   78 GSTVTAVNVNNLLGLNTLGISLVRIDYAVNGQNPPHTHPRATEILVVEQGTLLVGFVTSNP-DNRLFSKVLNEGDVFVFPEGLIHFQANIGKAPAVAFAALSSQNPGVITIANTVFGANPAINPTILAKAF 207          

HSP 2 Score: 70.8626 bits (172), Expect = 1.215e-52
Identity = 34/67 (50.75%), Postives = 40/67 (59.70%), Query Frame = 2
Query:   53 ITMKVIQFLIGFXXXXXXXXXXXXTDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGL 253
            + MK + FL               +DP  LQD CV+ N   +GVFVNGKFCKDPKL  A+DFFFSGL
Sbjct:    1 MAMKSLSFLAVLSLLALTLPLAIASDPSQLQDFCVSANTSANGVFVNGKFCKDPKLVTADDFFFSGL 67          
BLAST of CK936758 vs. ExPASy Swiss-Prot
Match: GL110_ARATH (Germin-like protein subfamily 1 member 10 OS=Arabidopsis thaliana GN=At5g38930 PE=2 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 1.013e-51
Identity = 82/131 (62.60%), Postives = 95/131 (72.52%), Query Frame = 1
Query:  283 GVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIXXXFNIGKTNAAAYSALNSQFPGEVTIADAVFGANPSINPDFLGKAF 675
            G   T  NV  + GLNTLGIS  RIDYA  GQ PPH HPRA+EI +V  GTL VGFVTS+  +N L  KVLN+GDVFVFP+GLI    NIGK  A A++AL+SQ PG +TIA  VFGANP+INP+ L KAF
Sbjct:   78 GSTVTAVNVNNLLGLNTLGISLVRIDYAVDGQNPPHTHPRATEILVVELGTLLVGFVTSNP-DNRLFTKVLNEGDVFVFPEGLIHFQANIGKAPAVAFAALSSQNPGVITIAPTVFGANPAINPNILAKAF 207          

HSP 2 Score: 70.4774 bits (171), Expect = 1.013e-51
Identity = 33/67 (49.25%), Postives = 39/67 (58.21%), Query Frame = 2
Query:   53 ITMKVIQFLIGFXXXXXXXXXXXXTDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGL 253
            + MK + FL               +DP  LQD CV+ N   +GVFVNGKFCKDPKL  A+DFFF GL
Sbjct:    1 MAMKSLSFLAALSLLALTLPLTIASDPSQLQDFCVSANSSANGVFVNGKFCKDPKLVTADDFFFPGL 67          
BLAST of CK936758 vs. ExPASy Swiss-Prot
Match: GL112_ARATH (Putative germin-like protein subfamily 1 member 12 OS=Arabidopsis thaliana GN=At5g38960 PE=2 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 4.141e-50
Identity = 78/135 (57.78%), Postives = 93/135 (68.89%), Query Frame = 1
Query:  271 SKSTGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIXXXFNIGKTNAAAYSALNSQFPGEVTIADAVFGANPSINPDFLGKAF 675
            S   G + T  NV QIPGLNTLGIS  RIDY   GQ PPH HPRA+EI LV EGTL+VGF +S    N L  K LNKGDVFVFP+GLI    NIGK  A A+++L+SQ PG + I + +FG+ P I+P+ L KAF
Sbjct:   75 SSPVGSNVTTVNVNQIPGLNTLGISLVRIDYGINGQNPPHTHPRATEILLVQEGTLFVGFFSSFP-ENRLFNKTLNKGDVFVFPEGLIHFQVNIGKQPAVAFASLSSQNPGVIIIGNTLFGSKPPIDPNVLAKAF 208          

HSP 2 Score: 69.707 bits (169), Expect = 4.141e-50
Identity = 29/49 (59.18%), Postives = 36/49 (73.47%), Query Frame = 2
Query:  125 TDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNT 271
            +DP  LQD C+ +N P + +FVNGKFCKDPKL  A+DF+FSGL K   T
Sbjct:   25 SDPSPLQDFCIGVNTPANALFVNGKFCKDPKLVTADDFYFSGLDKARTT 73          
BLAST of CK936758 vs. ExPASy Swiss-Prot
Match: GL13_ARATH (Germin-like protein subfamily 1 member 3 OS=Arabidopsis thaliana GN=At3g04170 PE=2 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 9.168e-50
Identity = 73/124 (58.87%), Postives = 88/124 (70.97%), Query Frame = 1
Query:  304 NVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIXXXFNIGKTNAAAYSALNSQFPGEVTIADAVFGANPSINPDFLGKAF 675
            N   IPGLNTLG+   RID+AP G  PPHIHPRASEI LV++G L VGFV+S+  N TL +K+L  GDVFV P GL+    NIGKTNA A  A+ SQ PG +++ DAVFG+ P I+P  L KAF
Sbjct:   81 NPANIPGLNTLGVGIARIDFAPGGLIPPHIHPRASEIILVIKGKLLVGFVSSNDYNYTLFSKILYPGDVFVHPIGLVQFHANIGKTNAVAIGAVGSQNPGYISVGDAVFGSKPPIDPKILAKAF 204          

HSP 2 Score: 71.633 bits (174), Expect = 9.168e-50
Identity = 34/52 (65.38%), Postives = 40/52 (76.92%), Query Frame = 2
Query:  128 DPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRL 283
            DP  LQD CVA+ + K+GVFVNG+FCKDPKL  ++DFF SGL  PGNT  RL
Sbjct:   26 DPSPLQDYCVAVPE-KNGVFVNGEFCKDPKLVTSDDFFASGLNIPGNTNKRL 76          
BLAST of CK936758 vs. ExPASy Swiss-Prot
Match: GL15_ARATH (Germin-like protein subfamily 1 member 5 OS=Arabidopsis thaliana GN=At3g04190 PE=2 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.196e-49
Identity = 77/135 (57.04%), Postives = 95/135 (70.37%), Query Frame = 1
Query:  271 SKSTGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIXXXFNIGKTNAAAYSALNSQFPGEVTIADAVFGANPSINPDFLGKAF 675
            S   GV  T  +V+++PGLNTLG+   RID+AP G  PPH HPR SEIFLV++G L+VGFV+S++ N TL  KVL  GDVFVFP+GLI    NIGKTNA   +A  SQ PG + I +AVFG+ P I+P  L KAF
Sbjct:   73 STGPGVKITVVDVKRMPGLNTLGVDIARIDFAPGGLYPPHTHPRGSEIFLVMKGKLFVGFVSSNEYNYTLFTKVLYPGDVFVFPKGLIQFHANIGKTNAVVIAATGSQNPGRIIIGNAVFGSKPLIDPKVLAKAF 207          

HSP 2 Score: 65.0846 bits (157), Expect = 1.196e-49
Identity = 30/49 (61.22%), Postives = 36/49 (73.47%), Query Frame = 2
Query:  128 DPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTA 274
            +P  LQD CVA N+  +GV+VNGKFCKDPK   A DF+ SGL  PGNT+
Sbjct:   26 EPSPLQDYCVATNET-NGVYVNGKFCKDPKCVTANDFYTSGLNVPGNTS 73          
BLAST of CK936758 vs. ExPASy Swiss-Prot
Match: GL14_ARATH (Germin-like protein subfamily 1 member 4 OS=Arabidopsis thaliana GN=At3g04180 PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 2.875e-48
Identity = 75/131 (57.25%), Postives = 92/131 (70.23%), Query Frame = 1
Query:  283 GVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIXXXFNIGKTNAAAYSALNSQFPGEVTIADAVFGANPSINPDFLGKAF 675
            G   T  +VE++PGLNTLG+   R D+AP G  PPH HPR S+IFLV++G L+VGFV+S++ N TL  KVL  GDVFVFP+GLI    NIG+TNA   SA  SQ PG + I DAVFG+ P I+P  L KAF
Sbjct:   77 GARNTVVDVERLPGLNTLGVDIARYDFAPGGLDPPHTHPRGSQIFLVMKGKLFVGFVSSNEYNYTLFTKVLYPGDVFVFPKGLIHFHANIGETNAVVISAGGSQDPGRIIIGDAVFGSKPLIDPKVLAKAF 207          

HSP 2 Score: 62.7734 bits (151), Expect = 2.875e-48
Identity = 29/48 (60.42%), Postives = 34/48 (70.83%), Query Frame = 2
Query:  128 DPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNT 271
            DP  LQD CVA N+  +GV+VNG+FCKDPK     DF+ SGL  PGNT
Sbjct:   26 DPSPLQDYCVATNET-NGVYVNGEFCKDPKRVTTNDFYTSGLNVPGNT 72          
BLAST of CK936758 vs. ExPASy Swiss-Prot
Match: GLP1_MESCR (Germin-like protein OS=Mesembryanthemum crystallinum PE=2 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 1.080e-47
Identity = 72/119 (60.50%), Postives = 84/119 (70.59%), Query Frame = 1
Query:  283 GVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLN--NTLIAKVLNKGDVFVFPQGLIXXXFNIGKTNAAAYSALNSQFPGEVTIADAVFG 633
            G   T      +PGLNTLGIS  R+D+AP+G  PPH HPRA+E+F+VLEGT YVGFVTS+  +  N L AKVLNKGDVFVFPQGLI    NIG       S L+SQ PG +TIA+AVFG
Sbjct:   76 GFAATLVTAANLPGLNTLGISVARLDFAPHGLNPPHTHPRATEVFVVLEGTFYVGFVTSNLADGGNKLFAKVLNKGDVFVFPQGLIHFQLNIGNYPGVGISGLSSQNPGVITIANAVFG 194          

HSP 2 Score: 70.8626 bits (172), Expect = 1.080e-47
Identity = 31/53 (58.49%), Postives = 34/53 (64.15%), Query Frame = 2
Query:  125 TDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRL 283
            TDP  LQD CV +N P DG+FVNG FCKDP     +DF F GL  P NT N L
Sbjct:   23 TDPTQLQDFCVGVNKPNDGLFVNGLFCKDPMEVNPDDFLFRGLNMPANTDNAL 75          
The following BLAST results are available for this feature:
BLAST of CK936758 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
GL17_ARATH1.767e-5763.36Germin-like protein subfamily 1 member 7 OS=Arabid... [more]
GL18_ARATH7.248e-5655.56Germin-like protein subfamily 1 member 8 OS=Arabid... [more]
GL12_ARATH1.214e-5257.04Putative germin-like protein subfamily 1 member 2 ... [more]
GL111_ARATH1.215e-5262.60Germin-like protein subfamily 1 member 11 OS=Arabi... [more]
GL110_ARATH1.013e-5162.60Germin-like protein subfamily 1 member 10 OS=Arabi... [more]
GL112_ARATH4.141e-5057.78Putative germin-like protein subfamily 1 member 12... [more]
GL13_ARATH9.168e-5058.87Germin-like protein subfamily 1 member 3 OS=Arabid... [more]
GL15_ARATH1.196e-4957.04Germin-like protein subfamily 1 member 5 OS=Arabid... [more]
GL14_ARATH2.875e-4857.25Germin-like protein subfamily 1 member 4 OS=Arabid... [more]
GLP1_MESCR1.080e-4760.50Germin-like protein OS=Mesembryanthemum crystallin... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004518_D03 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0001_IF_D03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK936758 ID=CK936758; Name=CK936758; organism=Citrus sinensis; type=EST; length=677bp
GAGGAATCACAACACTTGATTAAAGTTTGAGATAGGCACATCCTGTGACT
TAATCACCATGAAGGTAATTCAATTTCTTATAGGTTTTGCCCTCTTGGCT
TTGGCTTCTTCTTTGGCCTCTGCCACTGACCCTGGCCATCTTCAAGATGT
CTGTGTAGCCATCAATGACCCCAAGGATGGTGTGTTTGTGAATGGGAAGT
TCTGCAAGGACCCCAAGCTTGCGAGAGCAGAAGATTTCTTCTTCTCAGGG
CTAGGCAAGCCTGGAAACACAGCAAATCGACTGGTGTTGATGAAACAGAT
GCAAATGTTGAGCAAATTCCAGGACTCAACACCCTTGGCATATCAGCATT
CCGTATTGACTATGCACCATATGGCCAAAGGCCACCTCACATTCACCCCC
GTGCCAGCGAAATCTTCTTAGTCCTGGAAGGAACTCTTTATGTCGGTTTT
GTGACATCAGACCAACTGAATAACACACTCATCGCAAAAGTTCTAAATAA
GGGAGATGTTTTTGTGTTTCCACAAGGTTTGATTCANNNNNAATTCAACA
TTGGAAAAACAAATGCAGCTGCCTATTCTGCTCTAAACAGCCAATTCCCG
GGTGAAGTTACCATAGCCGACGCAGTCTTTGGAGCCAATCCTTCAATCAA
TCCCGATTTTCTTGGCAAGGCATTCCA
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