EY665832

Overview
NameEY665832
Unique NameEY665832
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length866
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665832 vs. ExPASy Swiss-Prot
Match: PUB9_ARATH (U-box domain-containing protein 9 OS=Arabidopsis thaliana GN=PUB9 PE=2 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.498e-37
Identity = 95/218 (43.58%), Postives = 128/218 (58.72%), Query Frame = 2
Query:   68 SCVRKAVELKKELQRLVKAILDEDDYGGLQVTNEALRVLSCLKDLKLKKPHSFKXXXXXXXXXXXXPYEFRCPISGEIMTDPVVLANGQTFDRPCIQRWLDEGNRTCPQTRQVLSHTVLIPNHLVREMISQWCKEHGIELPK---PIKDTDEDVVTDASRSHLNSLLEKMSSS-LSDQKKTPKELSGCLPKRMPFVPGTFLGSLRMAFPLLVSPLAPG 709
            + + KA ELK+E+++L+  I DEDD G +Q  ++    LS L++  ++K    K            P EFRCP+S E+M DPVVLA+GQT+D+  IQ+WL  GNRTCP+T+QVL HT L PN L+REMIS+WCK++G+E      P    +++ VT + R   NSLL K+SSS L DQK   KEL     K   F      G        LV+PL  G
Sbjct:   12 TAIAKAKELKREMKKLLIKIDDEDDLG-VQTIDQLQDALSALREATMRK--MAKSSSLEMLETVSCPEEFRCPLSNELMRDPVVLASGQTYDKLFIQKWLSSGNRTCPKTQQVLPHTALTPNLLIREMISKWCKKNGLETKSQYHPNLVNEDETVTRSDREIFNSLLCKVSSSNLQDQKSAAKELRLLTRKGTEF--RALFGESPDEITRLVNPLLHG 224          
BLAST of EY665832 vs. ExPASy Swiss-Prot
Match: PUB46_ARATH (Putative U-box domain-containing protein 46 OS=Arabidopsis thaliana GN=PUB46 PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.554e-26
Identity = 77/225 (34.22%), Postives = 128/225 (56.89%), Query Frame = 2
Query:   65 ESCVRKAVELKKELQRLVKAIL------DEDDY----GGLQVTNEALRVLSCLKDLKLKKPHSFKXXXXXXXXXXXXPYEFRCPISGEIMTDPVVLANGQTFDRPCIQRWLDEGNRTCPQTRQVLSHTVLIPNHLVREMISQWCKEHGIELPKPIKDTDEDVVTDASRSHLNSLLEKM--SSSLSDQKKTPKELSGCLPKRMPFVPGTFLGSLRMAFPLLVSPLA 703
            +S    A  L++ELQ+++  IL      D D+     G ++  +EA+R+L+CL+ ++ K P S              P EF C +S  IM +PV++A+GQT+++  I  WL    RTCP+T+QVLSH + IPNHL+ ++I+QWC  +  +  KP     +++V +   S + +LL+++  SSS++DQ +  KEL     K+ P V   F+  +  +   L+SPL+
Sbjct:    3 DSTETNADTLRRELQKVLTEILNDGGGNDRDETEAFSGVVKAIDEAVRILTCLRKVESKIPES-------DISPVEVPKEFICTLSNTIMIEPVIIASGQTYEKRYITEWLKH-ERTCPKTKQVLSHRLWIPNHLISDLITQWCLVNKYDHQKP----SDELVAELFTSDIEALLQRVSSSSSVADQIEAAKELRH-QTKKFPNVRVFFVAGIHDSITRLLSPLS 214          
BLAST of EY665832 vs. ExPASy Swiss-Prot
Match: PUB47_ARATH (Putative U-box domain-containing protein 47 OS=Arabidopsis thaliana GN=PUB47 PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 3.828e-25
Identity = 68/182 (37.36%), Postives = 103/182 (56.59%), Query Frame = 2
Query:  164 NEALRVLSCLKDLKLKKPHSFKXXXXXXXXXXXXPYEFRCPISGEIMTDPVVLANGQTFDRPCIQRWLDEGNRTCPQTRQVLSHTVLIPNHLVREMISQWCKEHGIELPKPIKDTDEDVVTDASRSHLNSLLEKMS--SSLSDQKKTPKELSGCLPKRMPFVPGTFLGSLRMAFPLLVSPLA 703
            +EA+R+L+CL+ ++ K P S              P EF C +S +IM +P+++A+GQTF++  I  WL    RTCP+T+QVL H  +IPNHL+ E+I +WC  H  + PK       D V D     L SLL+++S  SS+ DQ +  KEL+    KR   V   F+  +  +   L++PL+
Sbjct:   39 DEAIRILTCLRKIESKNPES-------DISPVEVPKEFICTLSNKIMIEPMLIASGQTFEKSYILEWLKH-ERTCPRTKQVLYHRFMIPNHLINEVIKEWCLIHNFDRPK-----TSDEVIDLFTGDLESLLQRISSPSSVEDQTEAAKELA-LKAKRFSSVCVYFVAKIPDSITRLLTPLS 206          
BLAST of EY665832 vs. ExPASy Swiss-Prot
Match: SL11_ORYSJ (Protein spotted leaf 11 OS=Oryza sativa subsp. japonica GN=SPL11 PE=1 SV=2)

HSP 1 Score: 108.227 bits (269), Expect = 6.111e-23
Identity = 51/126 (40.48%), Postives = 85/126 (67.46%), Query Frame = 2
Query:  266 PYEFRCPISGEIMTDPVVLANGQTFDRPCIQRWLDEGNRTCPQTRQVLSHTVLIPNHLVREMISQWCKEHGIELPK----PIKDTDEDVVTDASRSHLNSLLEKMSSSLSDQKKTPKELSGCLPKR 631
            P EFRCPIS E+M DPV+++ GQT++R CI++W+  G+ TCP T+Q +S + L PN+++R +ISQWC+ +G+E PK    P K T     + + R+++++LL K+ S  ++++++       L KR
Sbjct:  274 PDEFRCPISLELMKDPVIVSTGQTYERACIEKWIASGHHTCPTTQQKMSTSALTPNYVLRSLISQWCETNGMEPPKRSTQPNKPT--PACSSSERANIDALLSKLCSPDTEEQRSAAAELRLLAKR 397          
BLAST of EY665832 vs. ExPASy Swiss-Prot
Match: SL11_ORYSI (Protein spotted leaf 11 OS=Oryza sativa subsp. indica GN=SPL11 PE=1 SV=2)

HSP 1 Score: 108.227 bits (269), Expect = 6.111e-23
Identity = 51/126 (40.48%), Postives = 85/126 (67.46%), Query Frame = 2
Query:  266 PYEFRCPISGEIMTDPVVLANGQTFDRPCIQRWLDEGNRTCPQTRQVLSHTVLIPNHLVREMISQWCKEHGIELPK----PIKDTDEDVVTDASRSHLNSLLEKMSSSLSDQKKTPKELSGCLPKR 631
            P EFRCPIS E+M DPV+++ GQT++R CI++W+  G+ TCP T+Q +S + L PN+++R +ISQWC+ +G+E PK    P K T     + + R+++++LL K+ S  ++++++       L KR
Sbjct:  274 PDEFRCPISLELMKDPVIVSTGQTYERACIEKWIASGHHTCPTTQQKMSTSALTPNYVLRSLISQWCETNGMEPPKRSTQPNKPT--PACSSSERANIDALLSKLCSPDTEEQRSAAAELRLLAKR 397          
BLAST of EY665832 vs. ExPASy Swiss-Prot
Match: PUB12_ARATH (U-box domain-containing protein 12 OS=Arabidopsis thaliana GN=PUB12 PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.361e-22
Identity = 46/118 (38.98%), Postives = 79/118 (66.95%), Query Frame = 2
Query:  266 PYEFRCPISGEIMTDPVVLANGQTFDRPCIQRWLDEGNRTCPQTRQVLSHTVLIPNHLVREMISQWCKEHGIELPK-------PIKDTDEDVVTDASRSHLNSLLEKMSSSLSDQKKT 598
            P EFRCPIS E+MTDPV++++GQT++R CI++WL+ G+ TCP+T++ L+  ++ PN+++R +I+QWC+ +GIE PK         K +      D   + +  LL K++S   + +++
Sbjct:  257 PEEFRCPISLELMTDPVIVSSGQTYERECIKKWLEGGHLTCPKTQETLTSDIMTPNYVLRSLIAQWCESNGIEPPKRPNISQPSSKASSSSSAPDDEHNKIEELLLKLTSQQPEDRRS 374          
BLAST of EY665832 vs. ExPASy Swiss-Prot
Match: PUB48_ARATH (U-box domain-containing protein 48 OS=Arabidopsis thaliana GN=PUB48 PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 6.757e-22
Identity = 72/229 (31.44%), Postives = 126/229 (55.02%), Query Frame = 2
Query:   38 MANPEVEETESCVRKAVELKKELQRLVKAILDE----DDYGGLQVTNEALRVLSCLKDLKLKKPHSFKXXXXXXXXXXXXPYEFRCPISGEIMTDPVVLANGQTFDRPCIQRWLDEGNRTCPQTRQVLSHTVLIPNHLVREMISQWCKEHGIELPKPIKDTDEDVVTDASRSHLNSLLEKM---SSSLSDQKKTPKELSGCLPKRMPFVPGTFLGSLRMAFPLLVSPLA 703
            MA+   + TE+     + L++EL++++   L++    D    ++  +EA+R+L+ LK ++ KK                 P EF+C +S  IM DPV++ +GQT+++  I  WL+  + TCP  +QVL    L PNHL+ E+I++WC  +  + P P K +D D VT+     + SLL+++   SSS++DQ +  KEL+    ++   V   F+  L  +   L++PL+
Sbjct:    1 MADSTADATETNA-DTLTLRRELKKVLTENLNDGGVKDRVETVKSIDEAIRILNRLKIVESKK-----RKRESDSSSVEVPKEFKCTLSKTIMIDPVIIFSGQTYEKRYITEWLNH-DLTCPTAKQVLYRVCLTPNHLINELITRWCLANKYDRPAP-KPSDIDYVTELFTDGIESLLQRISSPSSSVADQTEAAKELA-LQTEKFVNVRDFFIKELPDSITRLLTPLS 220          
BLAST of EY665832 vs. ExPASy Swiss-Prot
Match: PUB14_ARATH (U-box domain-containing protein 14 OS=Arabidopsis thaliana GN=PUB14 PE=1 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 6.757e-22
Identity = 49/127 (38.58%), Postives = 82/127 (64.57%), Query Frame = 2
Query:  266 PYEFRCPISGEIMTDPVVLANGQTFDRPCIQRWLDEGNRTCPQTRQVLSHTVLIPNHLVREMISQWCKEHGIELPKPIKDTDEDVV-----TDASRSHLNSLLEKMSSSLSDQKKTPKELSGCLPKR 631
            P  FRCPIS E+M DPV+++ GQT++R  IQ+WLD G++TCP++++ L H  L PN++++ +I+ WC+ +GIELP+         +     +D  R+ + SLLEK+++  ++Q++        L KR
Sbjct:  249 PEYFRCPISLELMKDPVIVSTGQTYERSSIQKWLDAGHKTCPKSQETLLHAGLTPNYVLKSLIALWCESNGIELPQNQGSCRTTKIGGSSSSDCDRTFVLSLLEKLANGTTEQQRAAAGELRLLAKR 375          
BLAST of EY665832 vs. ExPASy Swiss-Prot
Match: PUB15_ARATH (U-box domain-containing protein 15 OS=Arabidopsis thaliana GN=PUB15 PE=2 SV=2)

HSP 1 Score: 103.605 bits (257), Expect = 1.505e-21
Identity = 46/116 (39.66%), Postives = 78/116 (67.24%), Query Frame = 2
Query:  266 PYEFRCPISGEIMTDPVVLANGQTFDRPCIQRWLDEGNRTCPQTRQVLSHTVLIPNHLVREMISQWCKEHGIELPKPIKDTDEDVVTDASRSHLNSLLEKMSSS-LSDQKKTPKEL 610
            P+EF CPI+ EIM DPV++A GQT+++  IQ+W D G++TCP+TRQ L H  L PN  ++ +I QWC+++  ++P+     D     +  +  ++ L+E +SSS L +Q+++ K++
Sbjct:  291 PHEFLCPITLEIMLDPVIIATGQTYEKESIQKWFDAGHKTCPKTRQELDHLSLAPNFALKNLIMQWCEKNNFKIPEKEVSPDSQ---NEQKDEVSLLVEALSSSQLEEQRRSVKQM 403          
BLAST of EY665832 vs. ExPASy Swiss-Prot
Match: PUB45_ARATH (U-box domain-containing protein 45 OS=Arabidopsis thaliana GN=PUB45 PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.966e-21
Identity = 51/136 (37.50%), Postives = 81/136 (59.56%), Query Frame = 2
Query:  266 PYEFRCPISGEIMTDPVVLANGQTFDRPCIQRWLDEGNRTCPQTRQVLSHTVLIPNHLVREMISQWCKEHGIELPK-PIKDTDEDVVTDASRSHLNSLLEKMSSSLSDQKKTPKELSGCLPKRMPFVPGTFLGSLR 670
            P E RCPIS ++M DPV++A+GQT++R CI++W  +G+ TCP+T Q LSH  L PN+ V+ +IS WC+++G+++P  P +  D           LN     +S S S   ++ K +  C  K +  VP    G+++
Sbjct:  280 PEELRCPISLQLMYDPVIIASGQTYERICIEKWFSDGHNTCPKTHQQLSHLCLTPNYCVKALISSWCEQNGVQVPDGPPESLD-----------LNYWRLALSVSESTDTRSAKRVGSCKLKDVKVVPLEESGTIK 404          
The following BLAST results are available for this feature:
BLAST of EY665832 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 35
Match NameE-valueIdentityDescription
PUB9_ARATH1.498e-3743.58U-box domain-containing protein 9 OS=Arabidopsis t... [more]
PUB46_ARATH1.554e-2634.22Putative U-box domain-containing protein 46 OS=Ara... [more]
PUB47_ARATH3.828e-2537.36Putative U-box domain-containing protein 47 OS=Ara... [more]
SL11_ORYSJ6.111e-2340.48Protein spotted leaf 11 OS=Oryza sativa subsp. jap... [more]
SL11_ORYSI6.111e-2340.48Protein spotted leaf 11 OS=Oryza sativa subsp. ind... [more]
PUB12_ARATH1.361e-2238.98U-box domain-containing protein 12 OS=Arabidopsis ... [more]
PUB48_ARATH6.757e-2231.44U-box domain-containing protein 48 OS=Arabidopsis ... [more]
PUB14_ARATH6.757e-2238.58U-box domain-containing protein 14 OS=Arabidopsis ... [more]
PUB15_ARATH1.505e-2139.66U-box domain-containing protein 15 OS=Arabidopsis ... [more]
PUB45_ARATH1.966e-2137.50U-box domain-containing protein 45 OS=Arabidopsis ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-006-B03-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665832 ID=EY665832; Name=EY665832; organism=Citrus sinensis; type=EST; length=866bp
CTTTCATTGTCTTTTTCTTTATTTTTTTATTTTATTTATGGCCAACCCAG
AAGTTGAAGAAACAGAGTCATGTGTTAGAAAGGCTGTAGAGTTGAAGAAA
GAGTTGCAGAGACTGGTGAAGGCAATTCTTGATGAAGATGATTATGGAGG
TTTACAAGTCACTAATGAGGCCTTAAGAGTCTTGTCTTGCTTGAAAGATT
TGAAGTTGAAAAAACCCCATTCTTTTAAAGGTGGTGCTGCTGGTGATGAT
CATCTTCTGGGTTTGCCTTATGAGTTCAGGTGTCCTATTTCTGGAGAGAT
TATGACTGATCCTGTTGTCTTGGCTAATGGTCAGACTTTTGATCGCCCTT
GCATCCAGAGATGGCTAGACGAAGGGAACCGAACATGCCCTCAAACCCGA
CAAGTTCTCTCTCATACAGTTCTTATTCCTAATCACTTGGTACGAGAAAT
GATTTCACAATGGTGCAAAGAGCATGGCATTGAGCTGCCAAAGCCCATTA
AGGATACAGATGAGGATGTTGTGACTGATGCCAGCAGAAGCCATTTAAAT
TCACTGCTTGAGAAGATGTCTTCTTCCCTCTCTGACCAGAAAAAAACACC
AAAAGAGCTTTCCGGTTGCTTACCAAAGAGGATGCCCTTTGTTCCCGGCA
CCTTTTTGGGGAGCCTACGGATGGCCTTTCCCCTATTGGTAAGCCCCCTG
GCCCCCGGCCAAACTTAATCTGGTTCCTGGGTCCCCTAAAAGGTTTAATC
CCCCACAATAATGGAACCCCCCCATTTCTTGATTAAAATTAAAAAACTAG
TTGGCGGGAAACTCCTTGGCCCCTCCTCCCTGCTAATTGCCCTCCCGGAC
AGATTGGGCACCATTG
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