CK936745

Overview
NameCK936745
Unique NameCK936745
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length701
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10948 contig Csv1_Contig10948:85..785. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK936745 vs. ExPASy Swiss-Prot
Match: MTDH_MEDSA (Probable mannitol dehydrogenase OS=Medicago sativa GN=CAD1 PE=1 SV=1)

HSP 1 Score: 248.825 bits (634), Expect = 2.047e-65
Identity = 118/230 (51.30%), Postives = 152/230 (66.09%), Query Frame = 1
Query:   10 MAKSPEEXXPVKAFGWAARDSSGHLSPFNFSRRETGDEDVRLKVLYCGICHTDLANIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITFGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLAEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISTSPSKKTEALEHLGAD 699
            MAKSPE   P+KAFGWAARD+SG LSPF+FSRRE GD+DV +K+LYCG+CH+DL  +KN+WGF+ +P+VPGHEI G VT+                     +C +CE+C  DLE YCPK + TY+S    GT T+GGYSD +V ++RY+V+FPD++PLDA APLLCAGITVYSP+KY+G+ E                              ISTSP+K+TEA++ LGAD
Sbjct:    1 MAKSPETELPLKAFGWAARDTSGTLSPFHFSRRENGDDDVSVKILYCGVCHSDLHTLKNDWGFTTYPVVPGHEIVGVVTKVGINVKKFRVGDNVGVGVIVESCQTCENCNQDLEQYCPKPVFTYNS-PYKGTRTYGGYSDFVVVHQRYVVQFPDNLPLDAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAIKFGKAFGLKVTVISTSPNKETEAIDKLGAD 229          
BLAST of CK936745 vs. ExPASy Swiss-Prot
Match: MTDH_FRAAN (Probable mannitol dehydrogenase OS=Fragaria ananassa GN=CAD PE=2 SV=1)

HSP 1 Score: 246.899 bits (629), Expect = 7.778e-65
Identity = 123/225 (54.67%), Postives = 144/225 (64.00%), Query Frame = 1
Query:   25 EEXXPVKAFGWAARDSSGHLSPFNFSRRETGDEDVRLKVLYCGICHTDLANIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITFGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLAEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISTSPSKKTEALEHLGAD 699
            E+    KA GWAARDSSG LSPFNF RRETG++DV  KVLYCGICH+DL  +KNEWGFS +P+VPGHEI GEVTE                     +C SCE+C + LENYCPK ILTY +   DG+ T+GGYSD MVA+E +IVR PD++PLD AAPLLCAGIT YSPL+YFGL +                              ISTSP K+ EAL+HLGAD
Sbjct:    4 EQEHRKKASGWAARDSSGVLSPFNFYRRETGEKDVTFKVLYCGICHSDLHMVKNEWGFSTYPLVPGHEIVGEVTEVGSKVQKFKVGDRVGVGCIVGSCRSCENCTDHLENYCPKQILTYGAKYYDGSTTYGGYSDIMVADEHFIVRIPDNLPLDGAAPLLCAGITTYSPLRYFGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPKKEEEALKHLGAD 228          
BLAST of CK936745 vs. ExPASy Swiss-Prot
Match: GEDH1_OCIBA (Geraniol dehydrogenase 1 OS=Ocimum basilicum GN=GEDH1 PE=1 SV=1)

HSP 1 Score: 241.891 bits (616), Expect = 2.502e-63
Identity = 120/230 (52.17%), Postives = 143/230 (62.17%), Query Frame = 1
Query:   10 MAKSPEEXXPVKAFGWAARDSSGHLSPFNFSRRETGDEDVRLKVLYCGICHTDLANIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITFGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLAEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISTSPSKKTEALEHLGAD 699
            MAKSPE   PVKA GWAA D+SG  SPFNFSRR TG+ DV+ +VLYCG+CH+DL  +KNEWG + +P+VPGHEI G VTE                     +C  C+ C+NDLENYC K ILTY +   DGTI  GGYSD MVA+E +I+R+P++ PLDA APLLCAGIT YSPLKYFGL +                              ISTS SKK EA++HLG D
Sbjct:    1 MAKSPETEHPVKALGWAATDNSGTFSPFNFSRRATGERDVQFRVLYCGVCHSDLHMVKNEWGVTHYPIVPGHEIVGIVTEVGSKVEKVKIGDKVGVGVLVGSCRQCDQCSNDLENYCYKQILTYGAPYLDGTIARGGYSDIMVADEHFIIRWPENFPLDAGAPLLCAGITTYSPLKYFGLDKPGLRVGVNGLGGLGHVAVKFAKAFGTKVTVISTSLSKKEEAMQHLGVD 230          
BLAST of CK936745 vs. ExPASy Swiss-Prot
Match: MTDH_MESCR (Probable mannitol dehydrogenase OS=Mesembryanthemum crystallinum GN=ELI3 PE=2 SV=1)

HSP 1 Score: 241.121 bits (614), Expect = 4.268e-63
Identity = 121/227 (53.30%), Postives = 140/227 (61.67%), Query Frame = 1
Query:   19 SPEEXXPVKAFGWAARDSSGHLSPFNFSRRETGDEDVRLKVLYCGICHTDLANIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITFGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLAEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISTSPSKKTEALEHLGAD 699
            +PE   P KAFGWAARD+SG LSP  FSRR TG++DV  KVLYCGICH+DL  IKNEWG +++P +PGHEI G VTE                     +C SCESC N LENYCPKMILTY S   DGT+T+GGYSD MV  E + VR PD+M LDA APLLCAG+TVYSPLK+F L +                              ISTSP+KK EA+  LGAD
Sbjct:    5 APENVHPQKAFGWAARDTSGTLSPLKFSRRATGEQDVTFKVLYCGICHSDLHYIKNEWGNAVYPAIPGHEIVGVVTEVGNKVQNFKVGDKVGVGCMVGSCRSCESCENHLENYCPKMILTYGSTYYDGTLTYGGYSDIMVVEEHFAVRIPDNMALDATAPLLCAGVTVYSPLKHFELDKPGLHIGVVGLGGLGHMAVKFGKAFGAKVTVISTSPNKKDEAVNRLGAD 231          
BLAST of CK936745 vs. ExPASy Swiss-Prot
Match: CADH9_ARATH (Probable cinnamyl alcohol dehydrogenase 9 OS=Arabidopsis thaliana GN=CAD9 PE=1 SV=2)

HSP 1 Score: 238.424 bits (607), Expect = 2.766e-62
Identity = 110/230 (47.83%), Postives = 146/230 (63.48%), Query Frame = 1
Query:   10 MAKSPEEXXPVKAFGWAARDSSGHLSPFNFSRRETGDEDVRLKVLYCGICHTDLANIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITFGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLAEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISTSPSKKTEALEHLGAD 699
            MAKSPE   P K FGW ARD SG LSPF+FSRR+ G+ DV +K+L+CG+CHTDL  IKN+WG+S +P+VPGHEI G  T+                     +C SCESC  DLENYCP+M  TY++I +DGT  +GGYS+++V ++R+++RFP+++P D+ APLLCAGITVYSP+KY+G+ E                              IS+S +K  EA+ HLGAD
Sbjct:    1 MAKSPETEHPNKVFGWGARDKSGVLSPFHFSRRDNGENDVTVKILFCGVCHTDLHTIKNDWGYSYYPVVPGHEIVGIATKVGKNVTKFKEGDRVGVGVISGSCQSCESCDQDLENYCPQMSFTYNAIGSDGTKNYGGYSENIVVDQRFVLRFPENLPSDSGAPLLCAGITVYSPMKYYGMTEAGKHLGVAGLGGLGHVAVKIGKAFGLKVTVISSSSTKAEEAINHLGAD 230          
BLAST of CK936745 vs. ExPASy Swiss-Prot
Match: CADH6_ARATH (Probable cinnamyl alcohol dehydrogenase 6 OS=Arabidopsis thaliana GN=CAD6 PE=2 SV=1)

HSP 1 Score: 230.72 bits (587), Expect = 5.768e-60
Identity = 112/227 (49.34%), Postives = 144/227 (63.44%), Query Frame = 1
Query:   19 SPEEXXPVKAFGWAARDSSGHLSPFNFSRRETGDEDVRLKVLYCGICHTDLANIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITFGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLAEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISTSPSKKTEALEHLGAD 699
            S E+   V+AFGWAARDSSGHLSPF FSRR+TG+E+VR+KVLYCGICH+DL  +KNEW  S++P+VPGHEI GEV+E                     +C +CESC  D ENYC K I TY+ ++ DGTI +GGYSDH+V +ERY V+ P ++PL +AAPLLCAGI++YSP+KYFGL                                +S++  K  +AL+ LGAD
Sbjct:    5 SGEKEQSVEAFGWAARDSSGHLSPFVFSRRKTGEEEVRVKVLYCGICHSDLHCLKNEWHSSIYPLVPGHEIIGEVSEIGNKVSKFNLGDKVGVGCIVDSCRTCESCREDQENYCTKAIATYNGVHHDGTINYGGYSDHIVVDERYAVKIPHTLPLVSAAPLLCAGISMYSPMKYFGLTGPDKHVGIVGLGGLGHIGVRFAKAFGTKVTVVSSTTGKSKDALDTLGAD 231          
BLAST of CK936745 vs. ExPASy Swiss-Prot
Match: CADH5_ORYSJ (Putative cinnamyl alcohol dehydrogenase 5 OS=Oryza sativa subsp. japonica GN=CAD5 PE=3 SV=2)

HSP 1 Score: 229.18 bits (583), Expect = 1.678e-59
Identity = 112/221 (50.68%), Postives = 139/221 (62.90%), Query Frame = 1
Query:   37 PVKAFGWAARDSSGHLSPFNFSRRETGDEDVRLKVLYCGICHTDLANIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITFGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLAEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISTSPSKKTEALEHLGAD 699
            P  A G AARD+SGHLSP   SRR TGD+DV +K+LYCGICH+DL +IKNEW  + +P+VPGHEIAG VTE                     +CHSC+SC   LEN+CP +I TY+S++ DGT+T+GGYS  +V +ER++VRFP++MPLD  APLLCAGITVYSP+KY GL                                IS+SP K+ EALE LGAD
Sbjct:    3 PTAAAGLAARDASGHLSPLTISRRSTGDDDVVIKILYCGICHSDLHSIKNEWKNATYPLVPGHEIAGVVTEAGKNVTKFKGGDKVGVGCMVNSCHSCDSCNQGLENHCPGVIFTYNSVDKDGTVTYGGYSSMVVVHERFVVRFPEAMPLDKGAPLLCAGITVYSPMKYHGLNVPSKHVGVLGLGGLGHVAVKFAKAFGMTVTVISSSPGKRQEALERLGAD 223          
BLAST of CK936745 vs. ExPASy Swiss-Prot
Match: MTDH_APIGR (Mannitol dehydrogenase OS=Apium graveolens GN=MTD PE=1 SV=1)

HSP 1 Score: 227.639 bits (579), Expect = 4.883e-59
Identity = 116/230 (50.43%), Postives = 142/230 (61.74%), Query Frame = 1
Query:   10 MAKSPEEXXPVKAFGWAARDSSGHLSPFNFSRRETGDEDVRLKVLYCGICHTDLANIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITFGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLAEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISTSPSKKTEALEHLGAD 699
            MAKS E   PVKAFGWAARD++G LSPF FSRR TG++DVRLKVL+CG+CH+D   I N WGF+ +P+VPGHEI G VTE                     +C SCESC ++ E++C   I TY SI  DGT+T GGYSD MVA+E +I+R+P ++PLD+ APLLCAGIT YSPLKY+GL +                              I  S SK+ EALE LGAD
Sbjct:    1 MAKSSEIEHPVKAFGWAARDTTGLLSPFKFSRRATGEKDVRLKVLFCGVCHSDHHMIHNNWGFTTYPIVPGHEIVGVVTEVGSKVEKVKVGDNVGIGCLVGSCRSCESCCDNRESHCENTIDTYGSIYFDGTMTHGGYSDTMVADEHFILRWPKNLPLDSGAPLLCAGITTYSPLKYYGLDKPGTKIGVVGLGGLGHVAVKMAKAFGAQVTVIDISESKRKEALEKLGAD 230          
BLAST of CK936745 vs. ExPASy Swiss-Prot
Match: CADH3_ORYSJ (Probable cinnamyl alcohol dehydrogenase 3 OS=Oryza sativa subsp. japonica GN=CAD3 PE=2 SV=1)

HSP 1 Score: 227.639 bits (579), Expect = 4.883e-59
Identity = 111/219 (50.68%), Postives = 138/219 (63.01%), Query Frame = 1
Query:   43 KAFGWAARDSSGHLSPFNFSRRETGDEDVRLKVLYCGICHTDLANIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITFGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLAEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISTSPSKKTEALEHLGAD 699
            +A G AARDSSGHLSPF  SRR TGD+DV +K+L+CGICH+DL  IKNEW  S++P+VPGHEIAG VTE                     +C SCESC N  EN+CP+ + TY+S++ DGT+T+GGYS  +V +ER++V FP++MPLD  APLLCAGITVY+P+KY GL                                IS+SP KK EALE LGAD
Sbjct:   15 QAVGLAARDSSGHLSPFAISRRSTGDDDVAIKILFCGICHSDLHCIKNEWKHSIYPLVPGHEIAGVVTEVGKNVTRFKAGDRVGVGCMVNSCRSCESCNNGFENHCPEGVFTYNSVDKDGTVTYGGYSSMVVVHERFVVMFPEAMPLDVGAPLLCAGITVYTPMKYHGLNAPGKHVGVLGLGGLGHVAVKFARAFGLKVTVISSSPGKKREALERLGAD 233          
BLAST of CK936745 vs. ExPASy Swiss-Prot
Match: CADH8_ARATH (Cinnamyl alcohol dehydrogenase 8 OS=Arabidopsis thaliana GN=CAD8 PE=1 SV=1)

HSP 1 Score: 225.713 bits (574), Expect = 1.856e-58
Identity = 111/219 (50.68%), Postives = 136/219 (62.10%), Query Frame = 1
Query:   43 KAFGWAARDSSGHLSPFNFSRRETGDEDVRLKVLYCGICHTDLANIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITFGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLAEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISTSPSKKTEALEHLGAD 699
            +AFG AA+D+SG LSPF+F+RRETG++DVR KVL+CGICH+DL  +KNEWG S +P+VPGHEI G VTE                     +C SC+SC   +ENYCPK I TY     D TIT+GGYSDHMV  E +++R PD++PLDAAAPLLCAGITVYSP+KY GL +                              ISTS  K+ EA+  LGAD
Sbjct:    8 EAFGLAAKDNSGVLSPFSFTRRETGEKDVRFKVLFCGICHSDLHMVKNEWGMSTYPLVPGHEIVGVVTEVGAKVTKFKTGEKVGVGCLVSSCGSCDSCTEGMENYCPKSIQTYGFPYYDNTITYGGYSDHMVCEEGFVIRIPDNLPLDAAAPLLCAGITVYSPMKYHGLDKPGMHIGVVGLGGLGHVGVKFAKAMGTKVTVISTSEKKRDEAINRLGAD 226          
The following BLAST results are available for this feature:
BLAST of CK936745 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 77
Match NameE-valueIdentityDescription
MTDH_MEDSA2.047e-6551.30Probable mannitol dehydrogenase OS=Medicago sativa... [more]
MTDH_FRAAN7.778e-6554.67Probable mannitol dehydrogenase OS=Fragaria ananas... [more]
GEDH1_OCIBA2.502e-6352.17Geraniol dehydrogenase 1 OS=Ocimum basilicum GN=GE... [more]
MTDH_MESCR4.268e-6353.30Probable mannitol dehydrogenase OS=Mesembryanthemu... [more]
CADH9_ARATH2.766e-6247.83Probable cinnamyl alcohol dehydrogenase 9 OS=Arabi... [more]
CADH6_ARATH5.768e-6049.34Probable cinnamyl alcohol dehydrogenase 6 OS=Arabi... [more]
CADH5_ORYSJ1.678e-5950.68Putative cinnamyl alcohol dehydrogenase 5 OS=Oryza... [more]
MTDH_APIGR4.883e-5950.43Mannitol dehydrogenase OS=Apium graveolens GN=MTD ... [more]
CADH3_ORYSJ4.883e-5950.68Probable cinnamyl alcohol dehydrogenase 3 OS=Oryza... [more]
CADH8_ARATH1.856e-5850.68Cinnamyl alcohol dehydrogenase 8 OS=Arabidopsis th... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCGF1004518_F12 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0001_IF_F12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK936745 ID=CK936745; Name=CK936745; organism=Citrus sinensis; type=EST; length=701bp
GCGGGGAAAATGGCAAAGTCACCAGAAGAAGNNNATCCAGTAAAGGCCTT
CGGGTGGGCAGCCCGAGACAGCTCCGGCCATCTCTCCCCATTCAACTTCT
CCAGAAGGGAAACGGGTGATGAGGATGTGAGGCTGAAGGTATTGTATTGT
GGGATCTGCCATACTGATCTCGCCAACATCAAGAATGAATGGGGCTTCTC
TCTCTTCCCTATGGTTCCTGGGCATGAAATTGCAGGGGAAGTGACAGAAG
TTGGTAGCAAAGTAAGAAAGGTTAAAGTGGGAGATAAAGTTGGAGTTGGA
TGCATGGTTGGTGCATGCCACAGCTGCGAGAGCTGTGCCAATGACCTTGA
AAATTACTGTCCGAAAATGATACTCACCTACAGTTCCATTAACACTGACG
GAACAATCACATTCGGAGGCTACTCTGATCACATGGTTGCCAATGAGCGC
TACATTGTTCGATTCCCTGATAGCATGCCCCTTGATGCTGCTGCTCCTCT
GCTTTGCGCCGGGATTACCGTGTACAGTCCATTGAAATACTTTGGACTAG
CAGAACAAGGAAAGCATGTAGGCATCGTTGGCCTTGGCGGGCTTGGTCAT
GTCGCTGTCAAATTTGCCAAGGCTTTTGGGGCCAAAGTGACAGTAATTAG
CACCTCTCCAAGCAAGAAGACTGAAGCTCTTGAACATCTTGGCGCTGATT
C
back to top