CK936738

Overview
NameCK936738
Unique NameCK936738
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length740
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13137 contig Csv1_Contig13137:41..783. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CK936738 vs. ExPASy Swiss-Prot
Match: VATL_MESCR (V-type proton ATPase 16 kDa proteolipid subunit OS=Mesembryanthemum crystallinum GN=VMAC1 PE=2 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 1.321e-55
Identity = 80/95 (84.21%), Postives = 82/95 (86.32%), Query Frame = 2 
Query:  113 STLFSGDETAPXXXXXXXXXXXXXSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHL 397
            ST+F+GDETAP             SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHL
Sbjct:    2 STVFNGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHL 96

HSP 2 Score: 80.4925 bits (197), Expect = 1.321e-55
Identity = 43/55 (78.18%), Postives = 43/55 (78.18%), Query Frame = 3 
Query:  438 MAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSRAGQSRAD 602
            MAIGIVGDAGVRANAQQPKLFVGM            YGLIVGIILSSRAGQSRAD
Sbjct:  111 MAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD 165
[Close]
BLAST of CK936738 vs. ExPASy Swiss-Prot
Match: VATL_BETVU (V-type proton ATPase 16 kDa proteolipid subunit OS=Beta vulgaris GN=VMAC1 PE=2 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 1.321e-55
Identity = 80/95 (84.21%), Postives = 82/95 (86.32%), Query Frame = 2 
Query:  113 STLFSGDETAPXXXXXXXXXXXXXSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHL 397
            ST+F+GDETAP             SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHL
Sbjct:    2 STVFNGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHL 96

HSP 2 Score: 80.4925 bits (197), Expect = 1.321e-55
Identity = 43/55 (78.18%), Postives = 43/55 (78.18%), Query Frame = 3 
Query:  438 MAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSRAGQSRAD 602
            MAIGIVGDAGVRANAQQPKLFVGM            YGLIVGIILSSRAGQSRAD
Sbjct:  111 MAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD 165
[Close]
BLAST of CK936738 vs. ExPASy Swiss-Prot
Match: VATL_KALDA (V-type proton ATPase 16 kDa proteolipid subunit OS=Kalanchoe daigremontiana PE=2 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 1.722e-55
Identity = 83/97 (85.57%), Postives = 83/97 (85.57%), Query Frame = 2 
Query:  107 MSSTLFSGDETAPXXXXXXXXXXXXXSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHL 397
            MSST FSGDETAP             SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHL
Sbjct:    1 MSST-FSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHL 96

HSP 2 Score: 80.4925 bits (197), Expect = 1.722e-55
Identity = 43/55 (78.18%), Postives = 43/55 (78.18%), Query Frame = 3 
Query:  438 MAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSRAGQSRAD 602
            MAIGIVGDAGVRANAQQPKLFVGM            YGLIVGIILSSRAGQSRAD
Sbjct:  111 MAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD 165
[Close]
BLAST of CK936738 vs. ExPASy Swiss-Prot
Match: VATL4_ARATH (V-type proton ATPase 16 kDa proteolipid subunit c4 OS=Arabidopsis thaliana GN=VHA-C4 PE=2 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 3.815e-55
Identity = 81/97 (83.51%), Postives = 83/97 (85.57%), Query Frame = 2 
Query:  107 MSSTLFSGDETAPXXXXXXXXXXXXXSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHL 397
            M+S+ FSGDETAP             SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHL
Sbjct:    1 MASSGFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHL 97

HSP 2 Score: 78.9518 bits (193), Expect = 3.815e-55
Identity = 42/55 (76.36%), Postives = 43/55 (78.18%), Query Frame = 3 
Query:  438 MAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSRAGQSRAD 602
            MAIGIVGDAGVRANAQQPKLFVGM            YGLIVGIILSSRAGQSRA+
Sbjct:  112 MAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAE 166
[Close]
BLAST of CK936738 vs. ExPASy Swiss-Prot
Match: VATL_GOSHI (V-type proton ATPase 16 kDa proteolipid subunit OS=Gossypium hirsutum GN=CVA16-2 PE=2 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 4.975e-55
Identity = 83/97 (85.57%), Postives = 83/97 (85.57%), Query Frame = 2 
Query:  107 MSSTLFSGDETAPXXXXXXXXXXXXXSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHL 397
            MSST FSGDETAP             SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHL
Sbjct:    1 MSST-FSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHL 96

HSP 2 Score: 78.9518 bits (193), Expect = 4.975e-55
Identity = 42/55 (76.36%), Postives = 43/55 (78.18%), Query Frame = 3 
Query:  438 MAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSRAGQSRAD 602
            MAIGIVGDAGVRANAQQPKLFVGM            YGLIVGIILSSRAGQSRA+
Sbjct:  111 MAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAE 165
[Close]
BLAST of CK936738 vs. ExPASy Swiss-Prot
Match: VATL_ORYSJ (V-type proton ATPase 16 kDa proteolipid subunit OS=Oryza sativa subsp. japonica GN=VATP-P1 PE=2 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 6.486e-55
Identity = 79/95 (83.16%), Postives = 81/95 (85.26%), Query Frame = 2 
Query:  113 STLFSGDETAPXXXXXXXXXXXXXSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHL 397
            S++FSGDETAP             SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAK YYLFDGYAHL
Sbjct:    2 SSVFSGDETAPFFGFLGAASALIFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKPYYLFDGYAHL 96

HSP 2 Score: 80.4925 bits (197), Expect = 6.486e-55
Identity = 43/55 (78.18%), Postives = 43/55 (78.18%), Query Frame = 3 
Query:  438 MAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSRAGQSRAD 602
            MAIGIVGDAGVRANAQQPKLFVGM            YGLIVGIILSSRAGQSRAD
Sbjct:  111 MAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD 165
[Close]
BLAST of CK936738 vs. ExPASy Swiss-Prot
Match: VATL_ORYSI (V-type proton ATPase 16 kDa proteolipid subunit OS=Oryza sativa subsp. indica GN=VATP-P1 PE=2 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 6.486e-55
Identity = 79/95 (83.16%), Postives = 81/95 (85.26%), Query Frame = 2 
Query:  113 STLFSGDETAPXXXXXXXXXXXXXSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHL 397
            S++FSGDETAP             SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAK YYLFDGYAHL
Sbjct:    2 SSVFSGDETAPFFGFLGAASALIFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKPYYLFDGYAHL 96

HSP 2 Score: 80.4925 bits (197), Expect = 6.486e-55
Identity = 43/55 (78.18%), Postives = 43/55 (78.18%), Query Frame = 3 
Query:  438 MAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSRAGQSRAD 602
            MAIGIVGDAGVRANAQQPKLFVGM            YGLIVGIILSSRAGQSRAD
Sbjct:  111 MAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD 165
[Close]
BLAST of CK936738 vs. ExPASy Swiss-Prot
Match: VATL_PHAAU (V-type proton ATPase 16 kDa proteolipid subunit OS=Phaseolus aureus PE=2 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 8.455e-55
Identity = 79/92 (85.87%), Postives = 79/92 (85.87%), Query Frame = 2 
Query:  122 FSGDETAPXXXXXXXXXXXXXSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHL 397
            FSGDETAP             SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHL
Sbjct:    4 FSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHL 95

HSP 2 Score: 80.4925 bits (197), Expect = 8.455e-55
Identity = 43/55 (78.18%), Postives = 43/55 (78.18%), Query Frame = 3 
Query:  438 MAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSRAGQSRAD 602
            MAIGIVGDAGVRANAQQPKLFVGM            YGLIVGIILSSRAGQSRAD
Sbjct:  110 MAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD 164
[Close]
BLAST of CK936738 vs. ExPASy Swiss-Prot
Match: VATL2_ARATH (V-type proton ATPase 16 kDa proteolipid subunit c2 OS=Arabidopsis thaliana GN=VHA-C2 PE=2 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 1.102e-54
Identity = 82/97 (84.54%), Postives = 83/97 (85.57%), Query Frame = 2 
Query:  107 MSSTLFSGDETAPXXXXXXXXXXXXXSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHL 397
            M+ST FSGDETAP             SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHL
Sbjct:    1 MAST-FSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHL 96

HSP 2 Score: 78.9518 bits (193), Expect = 1.102e-54
Identity = 42/55 (76.36%), Postives = 43/55 (78.18%), Query Frame = 3 
Query:  438 MAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSRAGQSRAD 602
            MAIGIVGDAGVRANAQQPKLFVGM            YGLIVGIILSSRAGQSRA+
Sbjct:  111 MAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAE 165
[Close]
BLAST of CK936738 vs. ExPASy Swiss-Prot
Match: VATL_AVESA (V-type proton ATPase 16 kDa proteolipid subunit OS=Avena sativa GN=VATP-P1 PE=2 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 1.873e-54
Identity = 78/95 (82.11%), Postives = 81/95 (85.26%), Query Frame = 2 
Query:  113 STLFSGDETAPXXXXXXXXXXXXXSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHL 397
            S++FSGDETAP             SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAK Y+LFDGYAHL
Sbjct:    2 SSVFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKPYFLFDGYAHL 96

HSP 2 Score: 80.4925 bits (197), Expect = 1.873e-54
Identity = 43/55 (78.18%), Postives = 43/55 (78.18%), Query Frame = 3 
Query:  438 MAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSRAGQSRAD 602
            MAIGIVGDAGVRANAQQPKLFVGM            YGLIVGIILSSRAGQSRAD
Sbjct:  111 MAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD 165
The following BLAST results are available for this feature:
BLAST of CK936738 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 44
Match NameE-valueIdentityDescription
VATL_MESCR1.321e-5584.21V-type proton ATPase 16 kDa proteolipid subunit OS... [more]
VATL_BETVU1.321e-5584.21V-type proton ATPase 16 kDa proteolipid subunit OS... [more]
VATL_KALDA1.722e-5585.57V-type proton ATPase 16 kDa proteolipid subunit OS... [more]
VATL4_ARATH3.815e-5583.51V-type proton ATPase 16 kDa proteolipid subunit c4... [more]
VATL_GOSHI4.975e-5585.57V-type proton ATPase 16 kDa proteolipid subunit OS... [more]
VATL_ORYSJ6.486e-5583.16V-type proton ATPase 16 kDa proteolipid subunit OS... [more]
VATL_ORYSI6.486e-5583.16V-type proton ATPase 16 kDa proteolipid subunit OS... [more]
VATL_PHAAU8.455e-5585.87V-type proton ATPase 16 kDa proteolipid subunit OS... [more]
VATL2_ARATH1.102e-5484.54V-type proton ATPase 16 kDa proteolipid subunit c2... [more]
VATL_AVESA1.873e-5482.11V-type proton ATPase 16 kDa proteolipid subunit OS... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004518_F04 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0001_IF_F04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK936738 ID=CK936738; Name=CK936738; organism=Citrus sinensis; type=EST; length=740bp
NCGGCCGGGGAGAAGTCATTAGTCTNNNCTTGAGAGAAAGAGCACGGAAC
AAATAACGAAAACAAAACACACGCTCAAGTCTCAGATCCAGTCCGCATCT
CCCAAGATGTCTTCAACATTATTCAGTGGCGATGAAACCGCTCCATTCTT
CGGCTTTCTCGGCGCCGCTGCCGCCCTAGTCTTTTCCTGTATGGGAGCTG
CGTACGGAACGGCGAAGAGTGGCGTCGGTGTGGCGTCGATGGGAGTGATG
AGGCCGGAGCTTGTGATGAAATCGATCGTGCCCGTTGTTATGGCGGGAGT
TTTGGGTATTTACGGTTTGATTATTGCTGTTATTATTAGTACCGGAATTA
ACCCTAAGGCCAAATCTTATTACCTTTTCGATGGCTACGCGCATCTCTTC
TGGCCTCGCTTGTGGCCTTGCTGGTCTCTCCGCTGGTATGGCAATTGGGA
TCGTCGGTGATGCTGGTGTCAGAGCTAATGCTCAACAGCCGAAGCTTTTC
GTTGGGATGATCCTCATTCTGATCTTTGCCGAAGCGCTGGCACTTTATGG
ACTTATTGTTGGTATCATTCTTTCTTCTCGTGCTGGTCAGTCAAGAGCAG
ACTAGAAGAGGATGCTTTGCTTGGTGGTTATTTGGCCTGTTGTGTTCCAT
TAAGAAGAATTCAGTTCATATTGCATGTGACGGGAGGTGGTAGTCTGCGT
TGGGTAGTGTTTTTCTTTTTCGACTTAAAAAATTATTGTC
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