CK936737
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK936737 vs. ExPASy Swiss-Prot
Match: PP438_ARATH (Pentatricopeptide repeat-containing protein At5g60960, mitochondrial OS=Arabidopsis thaliana GN=At5g60960 PE=2 SV=1) HSP 1 Score: 275.789 bits (704), Expect = 1.964e-73 Identity = 130/174 (74.71%), Postives = 150/174 (86.21%), Query Frame = 2 Query: 281 QRMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAGEMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRTEDAVKLFYRMGEWGCHPNETTFLVLIKSLYQAAR 802 ++ME DYG KRDK+SL LVV+KLCE G+AS AEK+VK+TANEIFPD+ ICDLLI GWC+ KLDEA RLAGEM RGGFE+GT AYN +LDCV KLCRKKDPF+L E EKVLL+ME+ GVPRN ETFNVLI+NLCKIRRTE+A+ LF RMGEWGC P+ T+LVLI+SLYQAAR Sbjct: 199 EKMENDYGLKRDKESLTLVVKKLCEKGHASIAEKMVKNTANEIFPDENICDLLISGWCIAEKLDEATRLAGEMSRGGFEIGTKAYNMMLDCVCKLCRKKDPFKLQPEVEKVLLEMEFRGVPRNTETFNVLINNLCKIRRTEEAMTLFGRMGEWGCQPDAETYLVLIRSLYQAAR 372
BLAST of CK936737 vs. ExPASy Swiss-Prot
Match: PPR54_ARATH (Pentatricopeptide repeat-containing protein At1g20300, mitochondrial OS=Arabidopsis thaliana GN=At1g20300 PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 3.524e-14 Identity = 54/177 (30.51%), Postives = 85/177 (48.02%), Query Frame = 2 Query: 254 LEADPLPISQRMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAGEMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRTEDAVKLFYRMGEWGCHPNETTFLVLIKS 784 L ++ + RME DYG DK + +V+ L AS A+ + PD + L++GWC G++ EA+++ EM G E Y+ ++D LCR S A V DM +G N TFN L+ K RTE ++++ +M + GC P+ T+ LI++ Sbjct: 201 LASEAVHCFNRME-DYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKDRFEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDA---LCRCGQI----SRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEA 369
BLAST of CK936737 vs. ExPASy Swiss-Prot
Match: PP275_ARATH (Pentatricopeptide repeat-containing protein At3g49730 OS=Arabidopsis thaliana GN=At3g49730 PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 3.524e-14 Identity = 47/161 (29.19%), Postives = 79/161 (49.07%), Query Frame = 2 Query: 299 YGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAGEMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKI-RRTEDAVKLFYRMGEWGCHPNETTFLVLI 778 YG + D+ +++ LC+NG A K+ +D + P+ + L+ GWC +GKL EAK + +M G E V + +L + + D + L + DM G NV + VLI LC+ +R ++A+++F M +GC + T+ LI Sbjct: 196 YGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMREKFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDL-------MNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALI 349
BLAST of CK936737 vs. ExPASy Swiss-Prot
Match: PP447_ARATH (Putative pentatricopeptide repeat-containing protein At5g65820 OS=Arabidopsis thaliana GN=At5g65820 PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 6.010e-14 Identity = 48/160 (30.00%), Postives = 76/160 (47.50%), Query Frame = 2 Query: 299 YGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAGEMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRTEDAVKLFYRMGEWGCHPNETTFLVLI 778 +GF+ D+ +++ LC++G A KL +D + + L+ GWC GK+ EAK + +M GFE V Y +L + + D + L L DM G N + VLI LCK+ R E+A+K+F M + C + T+ L+ Sbjct: 212 FGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMRFPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDL-------LRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALV 364
BLAST of CK936737 vs. ExPASy Swiss-Prot
Match: PP281_ARATH (Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidopsis thaliana GN=MEE40 PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.025e-13 Identity = 55/192 (28.65%), Postives = 91/192 (47.40%), Query Frame = 2 Query: 206 PDQVIARSLSGELLENLEADPLPISQRMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAGEMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRTEDAVKLFYRMGEWGCHPNETTFLVLI 778 P+ V +L L + + + R+ G D + +++ LC A +L ++ ++ PD+ ++LI C GKLDEA + +M G + YN ++D K + + EAE++ +ME +GV RN T+N LI LCK RR EDA +L +M G P++ T+ L+ Sbjct: 363 PNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTR-------EAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLL 547
BLAST of CK936737 vs. ExPASy Swiss-Prot
Match: PP422_ARATH (Pentatricopeptide repeat-containing protein At5g47360 OS=Arabidopsis thaliana GN=At5g47360 PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.284e-13 Identity = 53/163 (32.52%), Postives = 83/163 (50.92%), Query Frame = 2 Query: 314 DKDSLRLVVEKLCENGYASYAEKLVKDT-ANEIFPDDKICDLLIKGWCVDGKLDEAKRLAGEMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNG--VPRNVETFNVLISNLCKIRRTEDAVKLFYRMGEWGCHPNETTFLVLIKSLYQ 793 D + LV+ + G + A+ L+K+ ++PD +I G+C GK+D+A RLA EM + L +V Y+ IL+ V K + L +E EK E G + N T+ ++I C+ RR E+A+ + RMG GC PN T VLI+ + + Sbjct: 164 DTVAYNLVIRLFADKGDLNIADMLIKEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERALELLAEMEK-----EDGGGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMPNRVTACVLIQGVLE 321
BLAST of CK936737 vs. ExPASy Swiss-Prot
Match: PPR18_ARATH (Pentatricopeptide repeat-containing protein At1g06710, mitochondrial OS=Arabidopsis thaliana GN=At1g06710 PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.983e-13 Identity = 49/149 (32.89%), Postives = 73/149 (48.99%), Query Frame = 2 Query: 335 VVEKLCENGYASYAEKLVKDTANE-IFPDDKICDLLIKGWCVDGKLDEAKRLAGEMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRTEDAVKLFYRMGEWGCHPNETTFLVLI 778 +++ C++ A KL+ + E P+ + D LI G C GKLDEA+ + EM GF Y+ ++D K+ R+ A KVL M N NV + +I LCK+ +T++A KL M E GC PN T+ +I Sbjct: 645 LLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQ-------DLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMI 786
BLAST of CK936737 vs. ExPASy Swiss-Prot
Match: PP211_ARATH (Pentatricopeptide repeat-containing protein At3g04130, mitochondrial OS=Arabidopsis thaliana GN=At3g04130 PE=2 SV=2) HSP 1 Score: 75.0998 bits (183), Expect = 5.088e-13 Identity = 44/169 (26.04%), Postives = 88/169 (52.07%), Query Frame = 2 Query: 296 DYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAGEMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRTEDAVKLFYRMGEWGCHPNETTFLVLIKSLYQAAR 802 ++G +++ +S+ L+++ LC+ A ++ + I P+ ++ I GWC +++EA EM GF ++Y I+ C C++ + ++ ++L +ME NG P N T+ ++S+L + E+A+++ RM GC P+ + LI +L +A R Sbjct: 183 EFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLKSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRC---YCQQFEFIKV----YEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGR 344
BLAST of CK936737 vs. ExPASy Swiss-Prot
Match: PP389_ARATH (Pentatricopeptide repeat-containing protein At5g16640, mitochondrial OS=Arabidopsis thaliana GN=At5g16640 PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.133e-12 Identity = 60/201 (29.85%), Postives = 100/201 (49.75%), Query Frame = 2 Query: 206 PDQVIARSLSGELLENLEAD-PLPISQRMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKD-TANEIFPDDKICDLLIKGWCVDGKLDEAKRLAGEMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRTEDAVKLFYRMGEWGCHPNETTFLVLIKSLYQAAR 802 P+ VI ++ L ++ + D L + RME+D G D + ++ LC +G S A ++V T EI+PD + LI +G++ EA+ EM R + V Y+ + + LC RLD EAE++ M G +V T+++LI+ CK ++ E +KLF M + G N T+ +LI+ +A + Sbjct: 184 PNVVIYNTIIDGLCKSKQVDNALDLLNRMEKD-GIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLL---IYGLCMYS---RLD-EAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGK 376
BLAST of CK936737 vs. ExPASy Swiss-Prot
Match: PPR93_ARATH (Pentatricopeptide repeat-containing protein At1g62720 OS=Arabidopsis thaliana GN=At1g62720 PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.480e-12 Identity = 62/201 (30.85%), Postives = 99/201 (49.25%), Query Frame = 2 Query: 206 PDQVIARSL-SGELLENLEADPLPISQRMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTA-NEIFPDDKICDLLIKGWCVDGKLDEAKRLAGEMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVETFNVLISNLCKIRRTEDAVKLFYRMGEWGCHPNETTFLVLIKSLYQAAR 802 PD VI ++ G L D + + RMERD G + D + +V LC +G S A +L++D +I P+ +I + +GK EA +L EM R + YN + ++ LC R+D EA+++L M G +V T+N LI+ CK +R ++ KLF M + G + T+ +I+ +QA R Sbjct: 172 PDVVIYNTIIDGSCKIGLVNDAVELFDRMERD-GVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSL---INGLCMHG---RVD-EAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGR 364 The following BLAST results are available for this feature:
BLAST of CK936737 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 26
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Sequences
The
following sequences are available for this feature:
EST sequence >CK936737 ID=CK936737; Name=CK936737; organism=Citrus sinensis; type=EST; length=802bpback to top |