CK936692
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK936692 vs. ExPASy Swiss-Prot
Match: ATL1Q_ARATH (RING-H2 finger protein ATL1Q OS=Arabidopsis thaliana GN=ATL1Q PE=2 SV=2) HSP 1 Score: 182.185 bits (461), Expect = 3.169e-45 Identity = 83/142 (58.45%), Postives = 109/142 (76.76%), Query Frame = 2 Query: 413 ELLEASRAYWCLERTGSRGSSSMADFVEDLLRGRFIEEQFTPAILGAYHWQVRIASMSYDVNDTDCRAL-SRGLTGESLKKLPCHVILDEIKPTQSSCCSICLQDIIVGELARSLPHCHHTFHLACVDKWLIRHGSCPVCRR 835 E+LEASRAYW LE +GSRG SSMADFVE L RGR ++EQ ++ ++HWQ+RI+ +SY+ + L +RGL+G+SL+KLPC+++ E+ Q + C+ICLQDI GE+ RSLP C HTFHL CVDKWLIRHGSCP+CR+ Sbjct: 78 EVLEASRAYWYLELSGSRGPSSMADFVEQLFRGRLVDEQLMSTMINSHHWQLRISDVSYEEREDVYGELEARGLSGDSLRKLPCYIMSSEMVRRQVTHCTICLQDIKTGEITRSLPKCDHTFHLVCVDKWLIRHGSCPICRQ 219
BLAST of CK936692 vs. ExPASy Swiss-Prot
Match: ATL5P_ARATH (RING-H2 finger protein ATL5P OS=Arabidopsis thaliana GN=ATL5P PE=2 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 3.892e-27 Identity = 64/142 (45.07%), Postives = 83/142 (58.45%), Query Frame = 2 Query: 413 ELLEASRAYWCLERTGSRGSSSMADFVEDLLRGRFIEEQFTPAILGAYHWQV-RIASMSYDVNDTDCRALSRGLTGESLKKLPCHVILDEIKPTQSSCCSICLQDIIVGELARSLPHCHHTFHLACVDKWLIRHGSCPVCRR 835 E+ E+S W + +G + D + LL GR + E+ PA+L A Q+ + S D D A+S+GLTG+SL ++P I D S CS+CLQD VGE RSLPHCHH FHL C+DKWL RH SCP+CRR Sbjct: 80 EVFESSLLLWQSDESGIGCLLYLIDVIASLLSGRLVRERIGPAMLSAVQSQMGAVESQFQDHTDIFDTAISKGLTGDSLNRIPKVRITDTSPEIVS--CSVCLQDFQVGETVRSLPHCHHMFHLPCIDKWLRRHASCPLCRR 219
BLAST of CK936692 vs. ExPASy Swiss-Prot
Match: ATL2B_ARATH (RING-H2 finger protein ATL2B OS=Arabidopsis thaliana GN=ATL2B PE=2 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.384e-24 Identity = 59/146 (40.41%), Postives = 83/146 (56.85%), Query Frame = 2 Query: 413 ELLEASRAYWCLERTGSRGSSSMADFVEDLLRGRFIEEQFTPAILGAYHWQVRIASMSYDVNDT--DCRALSRGLTGESLKKLPCHVILDEIKPTQSS---CCSICLQDIIVGELARSLPHCHHTFHLACVDKWLIRHGSCPVCRR 835 E+ E+S W + +G + D + LL GR + E+ PA+L A Q+ ++D + + D S+GLTG+ ++K+P I S CS+CLQD +GE RSLPHCHH FHL C+D WL+RHGSCP+CRR Sbjct: 95 EVFESSLDLWKSDESGFGCFLYLIDVIVSLLSGRLVRERIGPAMLSAVQSQMGAVDTAFDDHTSLFDTGG-SKGLTGDLVEKIPKMTITGNNNTDASENTDSCSVCLQDFQLGETVRSLPHCHHMFHLPCIDNWLLRHGSCPMCRR 239
BLAST of CK936692 vs. ExPASy Swiss-Prot
Match: ATL4M_ARATH (RING-H2 finger protein ATL4M OS=Arabidopsis thaliana GN=ATL4M PE=2 SV=2) HSP 1 Score: 105.916 bits (263), Expect = 2.886e-22 Identity = 57/148 (38.51%), Postives = 80/148 (54.05%), Query Frame = 2 Query: 413 ELLEASRAYWCLERTGSRGSSSMADFVEDLLRGRFIEEQFTPAILGAYHWQVRIASMSYD----VNDTDCRALSRGLTGESLKKLPCHVILDEIKPTQSS---CCSICLQDIIVGELARSLPHCHHTFHLACVDKWLIRHGSCPVCRR 835 E+ E+S W + + D + L+ GR + E+ PA+L A Q+ +++ + DT S+GLTG+ + K+P I + S CS+CLQD +GE RSLPHCHH FHL C+D WL RHGSCP+CRR Sbjct: 90 EVFESSLVLWKSNESRFGCLLYLIDVIVSLISGRLVRERIGPAMLSAVQSQMGAVDSTFEELSSIFDTGG---SKGLTGDLVDKIPKIKITGKNNLDASGNKDSCSVCLQDFQLGETVRSLPHCHHMFHLPCIDNWLFRHGSCPMCRR 234
BLAST of CK936692 vs. ExPASy Swiss-Prot
Match: ATL5B_ARATH (RING-H2 finger protein ATL5B OS=Arabidopsis thaliana GN=ATL5B PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 4.619e-12 Identity = 33/82 (40.24%), Postives = 48/82 (58.54%), Query Frame = 2 Query: 590 DVNDTDCRALSRGLTGESLKKLPCHVILDEIKPTQSSCCSICLQDIIVGELARSLPHCHHTFHLACVDKWLIRHGSCPVCRR 835 D DT+ +++G+ +LK +P E+K + C ICL D + GE R LP C+H FH+ C+D WL+ H SCP CR+ Sbjct: 77 DPVDTNAN-VAKGIKKRALKVIPVDSYSPELKMKATECL-ICLGDFVEGETVRVLPKCNHGFHVKCIDTWLLSHSSCPTCRQ 156
BLAST of CK936692 vs. ExPASy Swiss-Prot
Match: ATL1I_ARATH (RING-H2 finger protein ATL1I OS=Arabidopsis thaliana GN=ATL1I PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 4.619e-12 Identity = 32/78 (41.03%), Postives = 45/78 (57.69%), Query Frame = 2 Query: 602 TDCRALSRGLTGESLKKLPCHVILDEIK-PTQSSCCSICLQDIIVGELARSLPHCHHTFHLACVDKWLIRHGSCPVCR 832 T C + ++G+ ++L+ P E+ P C ICL D + GE R LP CHH FH+ C+DKWL +H +CP CR Sbjct: 101 TPCGSSNKGINKKALRMFPVVSYSPEMNLPGLGEECVICLSDFVSGEQIRMLPKCHHGFHVRCIDKWLQQHLTCPKCR 178
BLAST of CK936692 vs. ExPASy Swiss-Prot
Match: ATL2I_ARATH (RING-H2 finger protein ATL2I OS=Arabidopsis thaliana GN=ATL2I PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.910e-11 Identity = 30/69 (43.48%), Postives = 42/69 (60.87%), Query Frame = 2 Query: 626 GLTGESLKKLPCHVILDEIKPTQSSCCSICLQDIIVGELARSLPHCHHTFHLACVDKWLIRHGSCPVCR 832 GL ++++ P + + PT +SCC+ICL D L R LP C+H FHL C+D WL + +CPVCR Sbjct: 121 GLDEDTIQSYPKILYSEAKGPTTASCCAICLGDYKGKHLLRQLPDCNHLFHLKCIDTWLRLNPTCPVCR 189 The following BLAST results are available for this feature:
BLAST of CK936692 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CK936692 ID=CK936692; Name=CK936692; organism=Citrus sinensis; type=EST; length=837bpback to top |