EY665827

Overview
NameEY665827
Unique NameEY665827
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length868
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY665827 vs. ExPASy Swiss-Prot
Match: DNAJ_CARHZ (Chaperone protein dnaJ OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.366e-11
Identity = 32/64 (50.00%), Postives = 41/64 (64.06%), Query Frame = 3 
Query:  276 DYYAVLGLLPDATPEQIKKAYYNCMKACHPDLSGDDPETTNFCMFINEVYAVLSDPVQRMVYDE 467
            DYY +LG+  +ATPE+IKKAY    +  HPD++ DDP        INE Y VLSDP +R  YD+
Sbjct:    4 DYYEILGVARNATPEEIKKAYRKLARKYHPDVNKDDPNAAEKFKEINEAYEVLSDPEKRARYDQ 67
The following BLAST results are available for this feature:
BLAST of EY665827 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
DNAJ_CARHZ5.366e-1150.00Chaperone protein dnaJ OS=Carboxydothermus hydroge... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-102-006-A06-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665827 ID=EY665827; Name=EY665827; organism=Citrus sinensis; type=EST; length=868bp
CTCTTCTCTTCATTTTTACCTTTTCTCTATCTCTGTGCCTGGTTCCTTTG
CTTGCTTGAACAACAATGGCTGCTCAGTTACTCACTCCTGTTTGCATTGA
TGTTCTCAAACTTCAAAACCCATCATTGAATAGTTTCAGCTCAAGAAGTT
CATGGCGCTTGCTGGATAATAACAGCAGCAGTTTGAGCTTGATGGGTCAC
AGTAGCAAGAGAAGAAGCTGTGGCAGAGCGAGGGTTACCGCAGAGGACTC
TGCTTCAACGGATGCCATTGCTGATGACTACTATGCTGTTTTGGGATTGC
TTCCGGATGCTACACCAGAGCAGATCAAGAAAGCTTACTATAATTGCATG
AAAGCATGCCATCCCGATTTAAGTGGCGATGATCCGGAGACCACAAATTT
CTGCATGTTCATTAATGAGGTTTATGCGGTTCTCAGTGACCCGGTGCAGC
GGATGGTTTATGATGAAATTCACGGTTATTCATTGATTGCAACCAATCCT
TTCTTGGATGATTCCTGCCCCAAGGATCATGTGTTTGTTGATGAATTTAA
GTTGCATAGGCTGTAAAATTGTAACCACGGGGCCCCAAAAATTTTTAAAA
TTGAAAAGGACTTTGGAAGAACATGAATGGTACCACCAGTGTGAAATACA
TGAATTTGTTCAACAACCAATTGAAAGTTGCCACGGTTAATTGGAATCAT
ATGCACTTTGGGTTAACAACCTTCCCTGCTTGAAAACGAAATTGCGCACA
GCAAAAAGACAAAAAAGGGCTGCCCCGGACACTTTTTCAAATGCGAAACT
GGGGCCCAAGAAGAACATATATAGATAGCAACACAACACCATGGCCACAA
CCCGACAATTTACACCAT
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