CX675175

Overview
NameCX675175
Unique NameCX675175
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length894
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2287 contig Csv1_Contig2287:73..967. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX675175 vs. ExPASy Swiss-Prot
Match: AATC_DAUCA (Aspartate aminotransferase, cytoplasmic OS=Daucus carota PE=2 SV=1)

HSP 1 Score: 409.453 bits (1051), Expect = 1.357e-113
Identity = 199/221 (90.05%), Postives = 210/221 (95.02%), Query Frame = -1
Query:  232 HACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHIIKQIGMFTFTGLNSEQVAFMTKEYHIYMTSDGRISMAGLSSKTVPHLTDAIHAAVT 894
            HACAHNPTGVDPT+EQWEQIRQLMRSK LLPFFDSAYQGFASGSLDADAQSVR+FVADGGECL AQSYAKNMGLYGERVGALSIVCKT DVAS+VESQLKLVIRPMYSSPP+HGASIVA ILKD  +Y EWTLELKAMADRIISMRQ+LF+AL A+GTPGDWSHI+KQIGMFTFTGLNSEQV FMT EYHIY+TSDGRISMAGLSS+TVPHL DAIHAAVT
Sbjct:  182 HACAHNPTGVDPTIEQWEQIRQLMRSKSLLPFFDSAYQGFASGSLDADAQSVRIFVADGGECLAAQSYAKNMGLYGERVGALSIVCKTADVASKVESQLKLVIRPMYSSPPLHGASIVAAILKDGDLYNEWTLELKAMADRIISMRQELFNALQAKGTPGDWSHIVKQIGMFTFTGLNSEQVTFMTNEYHIYLTSDGRISMAGLSSRTVPHLADAIHAAVT 402          
BLAST of CX675175 vs. ExPASy Swiss-Prot
Match: AAT2_ARATH (Aspartate aminotransferase, cytoplasmic isozyme 1 OS=Arabidopsis thaliana GN=ASP2 PE=1 SV=2)

HSP 1 Score: 406.371 bits (1043), Expect = 1.149e-112
Identity = 198/224 (88.39%), Postives = 209/224 (93.30%), Query Frame = -1
Query:  223 HACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHIIKQIGMFTFTGLNSEQVAFMTKEYHIYMTSDGRISMAGLSSKTVPHLTDAIHAAVTRMG 894
            HACAHNPTGVDPT EQWEQIRQLMRSK LLPFFDSAYQGFASGSLD DAQSVR FVADGGECL+AQSYAKNMGLYGERVGALSIVCK+ DVAS+VESQ+KLV+RPMYSSPPIHGASIVATILK S MY  WT+ELK MADRI SMRQQLF+A+ ARGTPGDWSHIIKQIGMFTFTGLN EQV FMTKE+HIYMTSDGRISMAGLSSKTVPHL DA+HAAVTR+G
Sbjct:  182 HACAHNPTGVDPTSEQWEQIRQLMRSKSLLPFFDSAYQGFASGSLDTDAQSVRTFVADGGECLIAQSYAKNMGLYGERVGALSIVCKSADVASKVESQVKLVVRPMYSSPPIHGASIVATILKSSDMYNNWTIELKEMADRIKSMRQQLFEAIQARGTPGDWSHIIKQIGMFTFTGLNKEQVEFMTKEFHIYMTSDGRISMAGLSSKTVPHLADAMHAAVTRLG 405          
BLAST of CX675175 vs. ExPASy Swiss-Prot
Match: AAT3_ARATH (Aspartate aminotransferase, chloroplastic OS=Arabidopsis thaliana GN=ASP3 PE=1 SV=1)

HSP 1 Score: 401.749 bits (1031), Expect = 2.830e-111
Identity = 194/222 (87.39%), Postives = 208/222 (93.69%), Query Frame = -1
Query:  229 HACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHIIKQIGMFTFTGLNSEQVAFMTKEYHIYMTSDGRISMAGLSSKTVPHLTDAIHAAVTR 894
            HACAHNPTGVDPT++QWEQIR+LMRSKGL+PFFDSAYQGFASGSLD DA+ +RMFVADGGECLVAQSYAKNMGLYGERVGALSIVCK+ DVA RVESQLKLVIRPMYSSPPIHGASIVA IL+D  ++ EWTLELKAMADRIISMR+QLF+AL  RGTPGDWSHIIKQIGMFTFTGLN  QV+FMTKEYHIYMTSDGRISMAGLSSKTVPHL DAIHA VT+
Sbjct:  226 HACAHNPTGVDPTIQQWEQIRKLMRSKGLMPFFDSAYQGFASGSLDTDAKPIRMFVADGGECLVAQSYAKNMGLYGERVGALSIVCKSADVAGRVESQLKLVIRPMYSSPPIHGASIVAVILRDKNLFNEWTLELKAMADRIISMRKQLFEALRTRGTPGDWSHIIKQIGMFTFTGLNPAQVSFMTKEYHIYMTSDGRISMAGLSSKTVPHLADAIHAVVTK 447          
BLAST of CX675175 vs. ExPASy Swiss-Prot
Match: AATC_ORYSJ (Aspartate aminotransferase, cytoplasmic OS=Oryza sativa subsp. japonica GN=Os01g0760600 PE=2 SV=1)

HSP 1 Score: 399.438 bits (1025), Expect = 1.404e-110
Identity = 196/223 (87.89%), Postives = 208/223 (93.27%), Query Frame = -1
Query:  226 HACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHIIKQIGMFTFTGLNSEQVAFMTKEYHIYMTSDGRISMAGLSSKTVPHLTDAIHAAVTRM 894
            HACAHNPTGVDPTL+QWEQIRQLMRSK LLPFFDSAYQGFASGSLD DAQSVRMFVADGGE L+AQSYAKNMGLYGERVGALSIVC + DVA RVESQLKLVIRPMYS+PPIHGASIVATILKDS M+ EWT+ELK MADRIISMRQQLFDAL  R TPGDWSHIIKQIGMFTFTGLNS+QVAFM +EYHIYMTSDGRISMAGLS +T+PHL DAIHAAVT++
Sbjct:  184 HACAHNPTGVDPTLDQWEQIRQLMRSKALLPFFDSAYQGFASGSLDQDAQSVRMFVADGGELLMAQSYAKNMGLYGERVGALSIVCGSADVAVRVESQLKLVIRPMYSNPPIHGASIVATILKDSAMFNEWTVELKGMADRIISMRQQLFDALKTRETPGDWSHIIKQIGMFTFTGLNSDQVAFMRQEYHIYMTSDGRISMAGLSGRTIPHLADAIHAAVTKL 406          
BLAST of CX675175 vs. ExPASy Swiss-Prot
Match: AAT1_MEDSA (Aspartate aminotransferase 1 OS=Medicago sativa GN=AAT-1 PE=2 SV=2)

HSP 1 Score: 397.127 bits (1019), Expect = 6.969e-110
Identity = 196/223 (87.89%), Postives = 208/223 (93.27%), Query Frame = -1
Query:  226 HACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHIIKQIGMFTFTGLNSEQVAFMTKEYHIYMTSDGRISMAGLSSKTVPHLTDAIHAAVTRM 894
            HACAHNPTGVDPTLEQWEQIRQL+RSK LLPFFDSAYQGFASGSLDADAQ VR+FVADGGE LVAQSYAKNMGLYGERVGALSIV K+ DV+SRVESQLKLVIRPMYSSPPIHGASIVA ILKD  +Y +WT+ELKAMADRII+MRQQLFDAL ARGTPGDWSHIIKQIGMFTFTGLN EQV+ +TKEYHIY+TSDGRISMAGLSSKTVPHL  AIHA VTR+
Sbjct:  195 HACAHNPTGVDPTLEQWEQIRQLIRSKSLLPFFDSAYQGFASGSLDADAQPVRLFVADGGELLVAQSYAKNMGLYGERVGALSIVSKSADVSSRVESQLKLVIRPMYSSPPIHGASIVAAILKDRDLYNDWTIELKAMADRIINMRQQLFDALRARGTPGDWSHIIKQIGMFTFTGLNPEQVSILTKEYHIYLTSDGRISMAGLSSKTVPHLAHAIHAVVTRV 417          
BLAST of CX675175 vs. ExPASy Swiss-Prot
Match: AAT4_ARATH (Aspartate aminotransferase, cytoplasmic isozyme 2 OS=Arabidopsis thaliana GN=ASP4 PE=2 SV=2)

HSP 1 Score: 375.555 bits (963), Expect = 2.172e-103
Identity = 181/222 (81.53%), Postives = 201/222 (90.54%), Query Frame = -1
Query:  226 ACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHIIKQIGMFTFTGLNSEQVAFMTKEYHIYMTSDGRISMAGLSSKTVPHLTDAIHAAVTRM 891
            ACAHNPTGVDPT EQWE+IR+L+RSK LLPFFDSAYQGFASGSLDADAQ+VRMFVADGGECL+AQSYAKNMGLYGER+G+L+IVC +EDVA +VE+Q+ LV+RPMY +PPIHGASIVATILK+S MY +WT+ELK MADRIISMRQQL+ AL ARGTPGDWSHIIK IGMFTFTGL+ EQV  M KEYHIYMT DGRISMA LSSKTVP L DAIHA VTR+
Sbjct:  181 ACAHNPTGVDPTFEQWEKIRRLVRSKSLLPFFDSAYQGFASGSLDADAQAVRMFVADGGECLIAQSYAKNMGLYGERIGSLTIVCTSEDVAKKVENQVLLVVRPMYLTPPIHGASIVATILKNSDMYNDWTIELKGMADRIISMRQQLYAALEARGTPGDWSHIIKHIGMFTFTGLSEEQVRLMAKEYHIYMTYDGRISMASLSSKTVPQLADAIHAVVTRI 402          
BLAST of CX675175 vs. ExPASy Swiss-Prot
Match: AAT5_ARATH (Aspartate aminotransferase, chloroplastic OS=Arabidopsis thaliana GN=ASP5 PE=1 SV=2)

HSP 1 Score: 267.314 bits (682), Expect = 8.329e-71
Identity = 127/217 (58.53%), Postives = 165/217 (76.04%), Query Frame = -1
Query:  247 HACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPG-DWSHIIKQIGMFTFTGLNSEQVAFMTKEYHIYMTSDGRISMAGLSSKTVPHLTDAI 894
            H CAHNPTG+DPT EQW +I  +++ K  +PFFD AYQGFASGSLD DA SVR+F   G E  VAQSY+KN+GLY ER+GA+++VC + D A+RV+SQLK + RPMYS+PP+HGA IVA ++ D TM+ EW  E++ MA RI ++RQ+L+D+L ++   G DWS I+KQIGMF+FTGLN  Q   MT ++H+YMT DGRIS+AGLS     +L DAI
Sbjct:  229 HGCAHNPTGIDPTPEQWVKIADVIQEKNHIPFFDVAYQGFASGSLDEDAASVRLFAERGMEFFVAQSYSKNLGLYAERIGAINVVCSSADAATRVKSQLKRIARPMYSNPPVHGARIVANVVGDVTMFSEWKAEMEMMAGRIKTVRQELYDSLVSKDKSGKDWSFILKQIGMFSFTGLNKAQSDNMTDKWHVYMTKDGRISLAGLSLAKCEYLADAI 445          
BLAST of CX675175 vs. ExPASy Swiss-Prot
Match: AATM_LUPAN (Aspartate aminotransferase P2, mitochondrial (Fragment) OS=Lupinus angustifolius PE=2 SV=1)

HSP 1 Score: 266.544 bits (680), Expect = 1.421e-70
Identity = 126/217 (58.06%), Postives = 169/217 (77.88%), Query Frame = -1
Query:  247 HACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPG-DWSHIIKQIGMFTFTGLNSEQVAFMTKEYHIYMTSDGRISMAGLSSKTVPHLTDAI 894
            H CAHNPTG+DPT EQWE+I  +++ K  +PFFD AYQGFASGSLD DA SVR+FVA G E LVAQSY+KN+GLY ER+GA++++  + + A+RV+SQLK + RPMYS+PP+HGA IVA I+ +  ++ EW +E++ MA RI ++RQQL+D++S++   G DWS I+KQIGMF++TGLN  Q   MT ++H+YMT DGRIS+AGLS     +L DAI
Sbjct:  230 HGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDEDAASVRLFVARGLEVLVAQSYSKNLGLYAERIGAINVISSSPESAARVKSQLKRIARPMYSNPPVHGARIVADIVGNPALFDEWKVEMEMMAGRIKNVRQQLYDSISSKDKSGKDWSFILKQIGMFSYTGLNKNQSDNMTNKWHVYMTKDGRISLAGLSLAKCEYLADAI 446          
BLAST of CX675175 vs. ExPASy Swiss-Prot
Match: AATM_DICDI (Aspartate aminotransferase, mitochondrial OS=Dictyostelium discoideum GN=aatA PE=3 SV=1)

HSP 1 Score: 263.848 bits (673), Expect = 9.209e-70
Identity = 130/222 (58.56%), Postives = 163/222 (73.42%), Query Frame = -1
Query:  229 HACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHIIKQIGMFTFTGLNSEQVAFMTKEYHIYMTSDGRISMAGLSSKTVPHLTDAIHAAVTR 894
            HACAHNPTGVDPT EQW++I ++ + +G    FD AYQGFASGS + DA +VRMFV DG    + QS+AKN GLYGER+GA SI+ +T D A  VESQLK++IRPMYS+PP++GA +V  ILKD  +  EW  E+K MADRII+MR+QL   L   G+  DWSHI  QIGMF FTGL  EQV  +  EYHIY+T +GRIS+AG++S  V +L  A+ AAVT+
Sbjct:  204 HACAHNPTGVDPTAEQWKKISEICKERGHFVLFDFAYQGFASGSPEKDAAAVRMFVEDGHNIALCQSFAKNFGLYGERIGAFSILTETSDQALNVESQLKILIRPMYSNPPVYGARLVQAILKDKELTNEWRSEVKGMADRIINMREQLVKYLKKHGSTRDWSHITTQIGMFCFTGLTPEQVDRLANEYHIYLTRNGRISIAGINSTNVEYLAKAM-AAVTK 424          
BLAST of CX675175 vs. ExPASy Swiss-Prot
Match: AATM_MOUSE (Aspartate aminotransferase, mitochondrial OS=Mus musculus GN=Got2 PE=1 SV=1)

HSP 1 Score: 262.307 bits (669), Expect = 2.679e-69
Identity = 128/217 (58.99%), Postives = 157/217 (72.35%), Query Frame = -1
Query:  244 HACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHIIKQIGMFTFTGLNSEQVAFMTKEYHIYMTSDGRISMAGLSSKTVPHLTDAIH 894
            HACAHNPTGVDP  EQW++I  +++ K L  FFD AYQGFASG  D DA +VR F+  G    + QSYAKNMGLYGERVGA ++VCK  + A RVESQLK++IRP+YS+PP++GA I ATIL    + K+W  E+K MADRIISMR QL   L   G+  +W HI  QIGMF FTGL  EQV  +TKE+ +YMT DGRIS+AG++S  V +L  AIH
Sbjct:  210 HACAHNPTGVDPRPEQWKEIASVVKKKNLFAFFDMAYQGFASGDGDKDAWAVRHFIEQGINVCLCQSYAKNMGLYGERVGAFTVVCKDAEEAKRVESQLKILIRPLYSNPPLNGARIAATILTSPDLRKQWLQEVKGMADRIISMRTQLVSNLKKEGSSHNWQHITDQIGMFCFTGLKPEQVERLTKEFSVYMTKDGRISVAGVTSGNVGYLAHAIH 426          
The following BLAST results are available for this feature:
BLAST of CX675175 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 50
Match NameE-valueIdentityDescription
AATC_DAUCA1.357e-11390.05Aspartate aminotransferase, cytoplasmic OS=Daucus ... [more]
AAT2_ARATH1.149e-11288.39Aspartate aminotransferase, cytoplasmic isozyme 1 ... [more]
AAT3_ARATH2.830e-11187.39Aspartate aminotransferase, chloroplastic OS=Arabi... [more]
AATC_ORYSJ1.404e-11087.89Aspartate aminotransferase, cytoplasmic OS=Oryza s... [more]
AAT1_MEDSA6.969e-11087.89Aspartate aminotransferase 1 OS=Medicago sativa GN... [more]
AAT4_ARATH2.172e-10381.53Aspartate aminotransferase, cytoplasmic isozyme 2 ... [more]
AAT5_ARATH8.329e-7158.53Aspartate aminotransferase, chloroplastic OS=Arabi... [more]
AATM_LUPAN1.421e-7058.06Aspartate aminotransferase P2, mitochondrial (Frag... [more]
AATM_DICDI9.209e-7058.56Aspartate aminotransferase, mitochondrial OS=Dicty... [more]
AATM_MOUSE2.679e-6958.99Aspartate aminotransferase, mitochondrial OS=Mus m... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS08_60D02_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-60D02-G4-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX675175 ID=CX675175; Name=CX675175; organism=Citrus sinensis; type=EST; length=894bp
TTTTTTTTAACATCGCAACTTTCGTTTTTCTTCTACTTAATAAACATGTC
AAGTTTTGGTGGAAAGACAAGAATACAACACCAAAACCAAAAGAACAAAA
TTTTCTTAATGTAAAACCTTTATTTATGCATTTTCTAGTTCTACAAACTC
ATTTTTGCATTGCTGAGGGTGACTGAAAACCAAACAATTCTTACGGCATG
AATTCTTGTCTGATTAATCTTAGCCCATTCGGGTTACAGCAGCATGTATA
GCATCGGTAAGATGAGGAACTGTCTTTGAACTAAGACCTGCCATGCTAAT
CCTCCCATCAGATGTCATATAAATGTGATACTCCTTGGTCATGAAGGCAA
CTTGTTCACTGTTCAGCCCTGTGAATGTAAACATTCCTATTTGCTTGATA
ATGTGACTCCAGTCTCCTGGAGTGCCTCTAGCAGACAGAGCATCAAATAG
TTGCTGACGCATGCTTATAATCCGGTCAGCCATCGCTTTCAGTTCAAGAG
TCCACTCTTTATACATAGTGCTGTCCTTGAGAATTGTAGCCACAATAGAG
GCCCCGTGAATAGGTGGACTAGAGTACATGGGCCTAATCACGAGTTTCAA
CTGGCTTTCAACCCTGCTTGCCACATCTTCTGTCTTGCAGACAATGCTGA
GGGCGCCGACACGTTCCCCATAGAGTCCCATGTTTTTCGCATAACTCTGA
GCTACCAGGCATTCGCCACCATCTGCCACAAACATGCGAACAGATTGTGC
ATCTGCATCTAGGCTACCACTTGCAAAACCCTGATAAGCACTGTCAAAGA
AAGGTAACAATCCTTTTGACCTCATCAGCTGCCTGATCTGCTCCCACTGC
TCAAGGGTCGGGTCAACACCAGTTGGATTATGAGCACATGCATG
back to top