CK936670
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK936670 vs. ExPASy Swiss-Prot
Match: RK5_ARATH (50S ribosomal protein L5, chloroplastic OS=Arabidopsis thaliana GN=RPL5 PE=1 SV=1) HSP 1 Score: 315.849 bits (808), Expect = 1.209e-85 Identity = 160/218 (73.39%), Postives = 184/218 (84.40%), Query Frame = 2 Query: 2 SSASKFHGRFPALSSSSYVRPTYPNPINVNGVVSVKAAAGGIVLVEKSEAEKTGRLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKE*SVFPEIRYDALGKPKGMDVCITTTAKTDKRG 655 SSAS FHGRF L++ S R P NV VK +A G VLVEKSEAEKT RLKT YLE+I+P L+EEF Y NIHQVPK++KIVVNCGIGDAAQN KGLEAAM D+ALITGQ+P+KTRAR SIATFKIRE +PLGIAVTLRG++MYSFLDRLINL LPRTRDFQGV+P+SFDG+GNYSIGVK+ VFPEIR+DA+GK +GMDVCI+TTAK+D+ G Sbjct: 9 SSASSFHGRFSPLAAPSSARMLSPPLRNV-----VKVSASGTVLVEKSEAEKTQRLKTAYLERIIPALKEEFKYVNIHQVPKVQKIVVNCGIGDAAQNDKGLEAAMKDIALITGQKPIKTRARASIATFKIREDQPLGIAVTLRGDVMYSFLDRLINLALPRTRDFQGVSPSSFDGNGNYSIGVKDQGVFPEIRFDAVGKTRGMDVCISTTAKSDQEG 221
BLAST of CK936670 vs. ExPASy Swiss-Prot
Match: RK5_SPIOL (50S ribosomal protein L5, chloroplastic OS=Spinacia oleracea GN=RPL5 PE=1 SV=2) HSP 1 Score: 282.722 bits (722), Expect = 1.135e-75 Identity = 138/179 (77.09%), Postives = 160/179 (89.39%), Query Frame = 2 Query: 113 AAGGIVLVEKSEAEKTGRLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKE*SVFPEIRYDALGKPKGMDVCITTTAKTDK 649 AAG V V+K+EAE RLKT Y+EK+VPLL+EEFSY+NI +VPK+ KIVVNCGIGDA+QNAKGL+AA+N+LALITGQRPVKT+A+ SIA FK+REG LGIAVTLRGN+MYSFLDRLINL LPRTRDFQGVNPNSFDGHGNYS+G +E SVFPEI+ + +GK +GMDVCITTTAKTDK Sbjct: 1 AAGTAVFVDKAEAETINRLKTNYIEKMVPLLKEEFSYSNILEVPKVVKIVVNCGIGDASQNAKGLDAAINELALITGQRPVKTKAKTSIAGFKVREGMTLGIAVTLRGNLMYSFLDRLINLALPRTRDFQGVNPNSFDGHGNYSVGFREQSVFPEIKPEIVGKARGMDVCITTTAKTDK 179
BLAST of CK936670 vs. ExPASy Swiss-Prot
Match: RK5_ORYSJ (50S ribosomal protein L5, chloroplastic OS=Oryza sativa subsp. japonica GN=RPL5 PE=2 SV=2) HSP 1 Score: 256.914 bits (655), Expect = 6.667e-68 Identity = 122/175 (69.71%), Postives = 148/175 (84.57%), Query Frame = 2 Query: 122 GIVLVEKSEAEKTGRLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKE*SVFPEIRYDALGKPKGMDVCITTTAKTD 646 GIVLV+ +EA+K RLK Y +K+VPL+ EEF YTN+HQVPK+EKIVVNCG+G A N+KGLE+AM DLA+ITGQ PVKT+A+ S+A+FKIREG +GIAVTLRG +M++FLDRLINLGLPRT DF GVNPNSFDGHGN++IG+++ VFPEI Y+ GK GMDVCI TTAKTD Sbjct: 63 GIVLVDPTEAQKVHRLKAVYDQKVVPLITEEFGYTNVHQVPKVEKIVVNCGLGAEAGNSKGLESAMKDLAMITGQWPVKTKAKKSVASFKIREGNTIGIAVTLRGRVMFNFLDRLINLGLPRTMDFLGVNPNSFDGHGNFTIGLRDQGVFPEIPYEVGGKKNGMDVCIVTTAKTD 237
BLAST of CK936670 vs. ExPASy Swiss-Prot
Match: RL5_SYNY3 (50S ribosomal protein L5 OS=Synechocystis sp. (strain PCC 6803) GN=rplE PE=3 SV=2) HSP 1 Score: 219.55 bits (558), Expect = 1.180e-56 Identity = 104/166 (62.65%), Postives = 133/166 (80.12%), Query Frame = 2 Query: 158 TGRLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKE*SVFPEIRYDALGKPKGMDVCITTTAKTDKRG 655 T RLKT Y E I+P L+EEF Y NIHQVPK+ K+ VN G+G+A+QNAK LE+++ +LA ITGQ+PV TRAR +IA FKIREG P+G+ VTLR MY+FLDRLINL LPR RDF+G++PNSFDG GNYS+G++E +FPEI YD + + +GMDV I T+A+TD+ G Sbjct: 2 TQRLKTLYQETILPKLQEEFGYKNIHQVPKLTKVTVNRGLGEASQNAKALESSLTELATITGQKPVVTRARKAIAGFKIREGMPVGVMVTLRSERMYAFLDRLINLALPRIRDFRGISPNSFDGRGNYSLGIREQLIFPEIDYDTIDQIRGMDVSIITSAQTDEEG 167
BLAST of CK936670 vs. ExPASy Swiss-Prot
Match: RL5_CYAP4 (50S ribosomal protein L5 OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=rplE PE=3 SV=1) HSP 1 Score: 219.55 bits (558), Expect = 1.180e-56 Identity = 105/164 (64.02%), Postives = 131/164 (79.88%), Query Frame = 2 Query: 164 RLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKE*SVFPEIRYDALGKPKGMDVCITTTAKTDKRG 655 RLKT YLE VP L E+F Y NIHQVPK+ KI +N G+G+AAQNAK LEA++N++ALI GQ+PV TRA+ +IA FKIR+G P+GI VTLR + MY+F DRLINL LPR RDF+GVNP SFDG GNYS+G++E +FPEI YD++ + +GMDV I TTA TD+ G Sbjct: 4 RLKTYYLENAVPKLMEQFKYKNIHQVPKLVKITINRGLGEAAQNAKSLEASLNEIALIAGQKPVVTRAKKAIAGFKIRQGMPVGIMVTLRSDRMYAFFDRLINLALPRIRDFRGVNPKSFDGRGNYSLGLREQLIFPEISYDSIDQMRGMDVSIITTATTDEEG 167
BLAST of CK936670 vs. ExPASy Swiss-Prot
Match: RL5_MICAN (50S ribosomal protein L5 OS=Microcystis aeruginosa (strain NIES-843) GN=rplE PE=3 SV=1) HSP 1 Score: 218.009 bits (554), Expect = 3.432e-56 Identity = 103/164 (62.80%), Postives = 133/164 (81.10%), Query Frame = 2 Query: 164 RLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKE*SVFPEIRYDALGKPKGMDVCITTTAKTDKRG 655 +LKTTY E IVP L+E+F YTNIHQVPK+ KI VN G+G+A+QNAK LE++ +L+ ITGQ+PV TRA+ +IA FKIREG P+G+ VTLRG+ MY+FLDRLINL LPR RDF+G++ NSFDG GNYS+G++E +FPEI YD + + +GMD+ I TTAK D+ G Sbjct: 4 KLKTTYQETIVPKLKEQFGYTNIHQVPKVIKITVNRGLGEASQNAKALESSKAELSTITGQQPVVTRAKKAIAGFKIREGMPVGVMVTLRGDRMYAFLDRLINLALPRIRDFRGISGNSFDGRGNYSLGIREQLIFPEIEYDKIDQIRGMDISIITTAKNDEEG 167
BLAST of CK936670 vs. ExPASy Swiss-Prot
Match: RL5_CYAP7 (50S ribosomal protein L5 OS=Cyanothece sp. (strain PCC 7424) GN=rplE PE=3 SV=1) HSP 1 Score: 217.238 bits (552), Expect = 5.854e-56 Identity = 103/166 (62.05%), Postives = 134/166 (80.72%), Query Frame = 2 Query: 158 TGRLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKE*SVFPEIRYDALGKPKGMDVCITTTAKTDKRG 655 T RLKT Y E IVP L+E+F+YTNIHQVPK+ K+ VN G+GDA+QNAK LE+++ +LA ITGQ+PV TRAR +IA FKIR+G P+G+ VTLR MY+FLDRLI+L LPR RDF+G++ NSFDG GNYS+G++E +FPEI YD + + +GMD+ I TTA+TD+ G Sbjct: 2 TQRLKTVYYETIVPKLKEQFNYTNIHQVPKVIKVTVNRGLGDASQNAKALESSIAELATITGQKPVVTRARKAIAGFKIRKGMPVGVMVTLRSERMYAFLDRLISLALPRIRDFRGISGNSFDGRGNYSLGIREQLIFPEIDYDKIDQIRGMDISIITTAQTDEEG 167
BLAST of CK936670 vs. ExPASy Swiss-Prot
Match: RK5_MESVI (50S ribosomal protein L5, chloroplastic OS=Mesostigma viride GN=rpl5 PE=3 SV=1) HSP 1 Score: 216.468 bits (550), Expect = 9.986e-56 Identity = 102/164 (62.20%), Postives = 130/164 (79.27%), Query Frame = 2 Query: 164 RLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKE*SVFPEIRYDALGKPKGMDVCITTTAKTDKRG 655 RLKT YLE V L+E F Y N HQ+P+I+KIV+NCG+ +A+QN+K LE+AM +L++I GQ+ V TRA+ +IA FKIREG P+GI +TLRG+ MY+FLDRLINL LPR RDFQGV+ SFDGHGNY++G+KE +FPEI YD + K +GMD+CI T AKTD G Sbjct: 4 RLKTLYLESAVLKLQETFGYKNPHQIPRIKKIVINCGLSEASQNSKSLESAMKELSIIAGQKGVITRAKKAIAGFKIREGLPIGICITLRGDSMYAFLDRLINLALPRIRDFQGVSSKSFDGHGNYNLGLKEQLMFPEIDYDQIDKIRGMDICIVTNAKTDSEG 167
BLAST of CK936670 vs. ExPASy Swiss-Prot
Match: RL5_ANASP (50S ribosomal protein L5 OS=Anabaena sp. (strain PCC 7120) GN=rplE PE=3 SV=1) HSP 1 Score: 215.698 bits (548), Expect = 1.703e-55 Identity = 101/166 (60.84%), Postives = 132/166 (79.52%), Query Frame = 2 Query: 158 TGRLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKE*SVFPEIRYDALGKPKGMDVCITTTAKTDKRG 655 T RLKT Y E IVP L ++F YTN+HQVPK+ KI VN G+G+AAQNAK LEA++ ++A ITGQ+PV TRA+ +IA FKIR+G P+GI VTLRG MY+F DRLI+L LPR RDF+G++P SFDG GNY++GV+E +FPEI YD++ + +G+D+ I TTAK D+ G Sbjct: 3 TTRLKTLYQETIVPKLTQQFQYTNVHQVPKLVKITVNRGLGEAAQNAKSLEASLTEIATITGQKPVVTRAKKAIAGFKIRQGMPVGIMVTLRGERMYAFFDRLISLSLPRIRDFRGISPKSFDGRGNYTLGVREQLIFPEIEYDSIDQIRGLDISIITTAKNDEEG 168
BLAST of CK936670 vs. ExPASy Swiss-Prot
Match: RL5_ANAVT (50S ribosomal protein L5 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=rplE PE=3 SV=1) HSP 1 Score: 215.312 bits (547), Expect = 2.225e-55 Identity = 100/166 (60.24%), Postives = 132/166 (79.52%), Query Frame = 2 Query: 158 TGRLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKE*SVFPEIRYDALGKPKGMDVCITTTAKTDKRG 655 T RLKT Y E I+P L ++F YTN+HQVPK+ KI VN G+G+AAQNAK LEA++ ++A ITGQ+PV TRA+ +IA FKIR+G P+GI VTLRG MY+F DRLI+L LPR RDF+G++P SFDG GNY++GV+E +FPEI YD++ + +G+D+ I TTAK D+ G Sbjct: 3 TTRLKTLYQETIIPKLTQQFQYTNVHQVPKLVKITVNRGLGEAAQNAKSLEASLTEIATITGQKPVVTRAKKAIAGFKIRQGMPVGIMVTLRGERMYAFFDRLISLSLPRIRDFRGISPKSFDGRGNYTLGVREQLIFPEIEYDSIDQIRGLDISIITTAKNDEEG 168 The following BLAST results are available for this feature:
BLAST of CK936670 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CK936670 ID=CK936670; Name=CK936670; organism=Citrus sinensis; type=EST; length=655bpback to top |