CK936654

Overview
NameCK936654
Unique NameCK936654
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length717
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2984 contig Csv1_Contig2984:64..780. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK936654 vs. ExPASy Swiss-Prot
Match: HSP16_SOYBN (18.5 kDa class I heat shock protein OS=Glycine max GN=HSP18.5-C PE=3 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 4.264e-50
Identity = 98/161 (60.87%), Postives = 113/161 (70.19%), Query Frame = 3
Query:   90 MSLIPSFFGNRRSSVSDPFALDVWDPFRDFPFPSGYSSALSSQSPPETSAVVNARVDWKETPEAHVFKTDLPGLXXXXXXXXXXXXXXLQISGQRNIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQIKASMESGXXXXXXXXXXXXXXXXXAIEISG 572
            MSLIP+FFG RR++V DPF+LDVWDPF+DFPFP+  SSA   +   E SA V+ RVDWKETPEAHVFK D+PGL              LQISG+RN+EKEDKNDTWHRVERSSG F RRFRLPEN K++Q+KASME+G                 AIEISG
Sbjct:    1 MSLIPNFFGGRRNNVFDPFSLDVWDPFKDFPFPNTLSSASFPEFSRENSAFVSTRVDWKETPEAHVFKADIPGLKKEEVKVQIEDDKVLQISGERNVEKEDKNDTWHRVERSSGKFMRRFRLPENAKVEQVKASMENGVLTVTVPKEEVKKPDVKAIEISG 161          
BLAST of CK936654 vs. ExPASy Swiss-Prot
Match: HSP11_SOYBN (17.3 kDa class I heat shock protein OS=Glycine max GN=HSP17.3-B PE=3 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 6.157e-49
Identity = 99/161 (61.49%), Postives = 110/161 (68.32%), Query Frame = 3
Query:   90 MSLIPSFFGNRRSSVSDPFALDVWDPFRDFPFPSGYSSALSSQSPPETSAVVNARVDWKETPEAHVFKTDLPGLXXXXXXXXXXXXXXLQISGQRNIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQIKASMESGXXXXXXXXXXXXXXXXXAIEISG 572
            MSLIPSFFG RRSSV DPF+LDVWDPF+DFPFPS  S+        E SA V+ RVDWKETPEAHVFK D+PGL              LQISG+RN+EKEDKNDTWHRVERSSG   RRFRLPEN K+DQ+KASME+G                 AI+ISG
Sbjct:    1 MSLIPSFFGGRRSSVFDPFSLDVWDPFKDFPFPSSLSA--------ENSAFVSTRVDWKETPEAHVFKADIPGLKKEEVKLEIQDGRVLQISGERNVEKEDKNDTWHRVERSSGKLVRRFRLPENAKVDQVKASMENGVLTVTVPKEEIKKPDVKAIDISG 153          
BLAST of CK936654 vs. ExPASy Swiss-Prot
Match: HSP12_MEDSA (18.2 kDa class I heat shock protein OS=Medicago sativa GN=HSP18.2 PE=2 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 1.791e-48
Identity = 97/161 (60.25%), Postives = 112/161 (69.57%), Query Frame = 3
Query:   90 MSLIPSFFGNRRSSVSDPFALDVWDPFRDFPFPSGYSSALSSQSPPETSAVVNARVDWKETPEAHVFKTDLPGLXXXXXXXXXXXXXXLQISGQRNIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQIKASMESGXXXXXXXXXXXXXXXXXAIEISG 572
            MSLIPSFFG RRS+V DPF+LDVWDPF+DFPF +   SALS+  P E SA V+ RVDWKETPEAHVFK DLPG+              LQISG+R++EKEDKND WHR+ERSSG F RRFRLPEN KMDQ+KA+ME+G                  I+ISG
Sbjct:    1 MSLIPSFFGGRRSNVFDPFSLDVWDPFKDFPFNN---SALSASFPRENSAFVSTRVDWKETPEAHVFKADLPGMKKEEVKVEIEDDRVLQISGERSVEKEDKNDQWHRLERSSGKFMRRFRLPENAKMDQVKAAMENGVLTVTVPKEEVKKPEVKTIDISG 158          
BLAST of CK936654 vs. ExPASy Swiss-Prot
Match: HSP13_SOYBN (17.5 kDa class I heat shock protein OS=Glycine max GN=HSP17.5-M PE=3 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 4.412e-47
Identity = 96/161 (59.63%), Postives = 109/161 (67.70%), Query Frame = 3
Query:   90 MSLIPSFFGNRRSSVSDPFALDVWDPFRDFPFPSGYSSALSSQSPPETSAVVNARVDWKETPEAHVFKTDLPGLXXXXXXXXXXXXXXLQISGQRNIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQIKASMESGXXXXXXXXXXXXXXXXXAIEISG 572
            MSLIPS FG RRS+V DPF+LDVWDPF+DF FP+  S+        E SA VN RVDWKETPEAHVF+ D+PGL              LQISG+RN+EKEDKNDTWHRVERSSG F RRFRLPEN K++Q+KASME+G                 AIEISG
Sbjct:    1 MSLIPSIFGGRRSNVFDPFSLDVWDPFKDFHFPTSLSA--------ENSAFVNTRVDWKETPEAHVFEADIPGLKKEEVKVQIEDDRVLQISGERNLEKEDKNDTWHRVERSSGNFMRRFRLPENAKVEQVKASMENGVLTVTVPKEEVKKPDVKAIEISG 153          
BLAST of CK936654 vs. ExPASy Swiss-Prot
Match: HSP11_PEA (18.1 kDa class I heat shock protein OS=Pisum sativum GN=HSP18.1 PE=2 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 2.860e-46
Identity = 95/161 (59.01%), Postives = 109/161 (67.70%), Query Frame = 3
Query:   90 MSLIPSFFGNRRSSVSDPFALDVWDPFRDFPFPSGYSSALSSQSPPETSAVVNARVDWKETPEAHVFKTDLPGLXXXXXXXXXXXXXXLQISGQRNIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQIKASMESGXXXXXXXXXXXXXXXXXAIEISG 572
            MSLIPSFF  RRS+V DPF+LDVWDP +DFPF +   S+ S+  P E  A V+ RVDWKETPEAHVFK DLPGL              LQISG+R++EKEDKND WHRVERSSG F RRFRLPEN KMD++KASME+G                 +IEISG
Sbjct:    1 MSLIPSFFSGRRSNVFDPFSLDVWDPLKDFPFSN---SSPSASFPRENPAFVSTRVDWKETPEAHVFKADLPGLKKEEVKVEVEDDRVLQISGERSVEKEDKNDEWHRVERSSGKFLRRFRLPENAKMDKVKASMENGVLTVTVPKEEIKKAEVKSIEISG 158          
BLAST of CK936654 vs. ExPASy Swiss-Prot
Match: HSP14_SOYBN (17.5 kDa class I heat shock protein OS=Glycine max GN=HSP17.5-E PE=3 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 3.735e-46
Identity = 94/161 (58.39%), Postives = 109/161 (67.70%), Query Frame = 3
Query:   90 MSLIPSFFGNRRSSVSDPFALDVWDPFRDFPFPSGYSSALSSQSPPETSAVVNARVDWKETPEAHVFKTDLPGLXXXXXXXXXXXXXXLQISGQRNIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQIKASMESGXXXXXXXXXXXXXXXXXAIEISG 572
            MSLIP FFG RRS+V DPF+LD+WDPF+DF  P+   SA       E SA V+ RVDWKETPEAHVFK D+PGL              LQISG+RN+EKEDKNDTWHRVERSSG F+RRFRLPEN K++++KASME+G                 AIEISG
Sbjct:    1 MSLIPGFFGGRRSNVFDPFSLDMWDPFKDFHVPTSSVSA-------ENSAFVSTRVDWKETPEAHVFKADIPGLKKEEVKVQIEDDRVLQISGERNVEKEDKNDTWHRVERSSGKFTRRFRLPENAKVNEVKASMENGVLTVTVPKEEVKKPDVKAIEISG 154          
BLAST of CK936654 vs. ExPASy Swiss-Prot
Match: HS17B_ARATH (17.6 kDa class I heat shock protein 2 OS=Arabidopsis thaliana GN=HSP17.6B PE=2 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 1.569e-44
Identity = 94/162 (58.02%), Postives = 113/162 (69.75%), Query Frame = 3
Query:   90 MSLIPSFFGN-RRSSVSDPFALDVWDPFRDFPFPSGYSSALSSQSPPETSAVVNARVDWKETPEAHVFKTDLPGLXXXXXXXXXXXXXXLQISGQRNIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQIKASMESGXXXXXXXXXXXXXXXXXAIEISG 572
            MS+IPSFF N RRS++ DPF+LDVWDPF++       SS+LS     E SA+VNARVDW+ETPEAHVFK DLPGL              L+ISG+R++EKEDKNDTWHRVERSSG F+RRFRLPENVKMDQ+KA+ME+G                 +I+ISG
Sbjct:    1 MSMIPSFFNNNRRSNIFDPFSLDVWDPFKELT-----SSSLSR----ENSAIVNARVDWRETPEAHVFKADLPGLKKEEVKVEIEEDSVLKISGERHVEKEDKNDTWHRVERSSGQFTRRFRLPENVKMDQVKAAMENGVLTVTVPKAETKKADVKSIQISG 153          
BLAST of CK936654 vs. ExPASy Swiss-Prot
Match: HS178_ARATH (17.8 kDa class I heat shock protein OS=Arabidopsis thaliana GN=HSP17.8 PE=2 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 2.677e-44
Identity = 88/140 (62.86%), Postives = 104/140 (74.29%), Query Frame = 3
Query:   90 MSLIPSFFGNRR--SSVSDPFALDVWDPFRDFPFPSGYSSALSSQSPPETSAVVNARVDWKETPEAHVFKTDLPGLXXXXXXXXXXXXXXLQISGQRNIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQIKASMESG 503
            MSLIPSFFGN R  +S+ DPF+LDVWDPF++  FPS  S         ETSA+ NARVDWKET EAHVFK DLPG+              L+ISG+R++EKE+K DTWHRVERSSG FSR+F+LPENVKMDQ+KASME+G
Sbjct:    1 MSLIPSFFGNNRRSNSIFDPFSLDVWDPFKELQFPSSLSG--------ETSAITNARVDWKETAEAHVFKADLPGMKKEEVKVEIEDDSVLKISGERHVEKEEKQDTWHRVERSSGQFSRKFKLPENVKMDQVKASMENG 132          
BLAST of CK936654 vs. ExPASy Swiss-Prot
Match: HSP11_DAUCA (17.8 kDa class I heat shock protein OS=Daucus carota PE=3 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 5.963e-44
Identity = 89/161 (55.28%), Postives = 106/161 (65.84%), Query Frame = 3
Query:   90 MSLIPSFFGNRRSSVSDPFALDVWDPFRDFPFPSGYSSALSSQSPPETSAVVNARVDWKETPEAHVFKTDLPGLXXXXXXXXXXXXXXLQISGQRNIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQIKASMESGXXXXXXXXXXXXXXXXXAIEISG 572
            MS+IPSFFG RRS+V DPF+LDVWDPF+DFP  +  +S        ET+A VN  +DWKETP+AHVFK DLPGL              LQISG+RN EKE+KND WHRVERSSG F RRFRLPEN K+D++KA+M +G                 AI+ISG
Sbjct:    1 MSIIPSFFGGRRSNVFDPFSLDVWDPFKDFPLVTSSASEFGK----ETAAFVNTHIDWKETPQAHVFKADLPGLKKEEVKVELEEGKVLQISGERNKEKEEKNDKWHRVERSSGKFLRRFRLPENAKVDEVKAAMANGVVTVTVPKVEIKKPEVKAIDISG 157          
BLAST of CK936654 vs. ExPASy Swiss-Prot
Match: HSP12_SOLPE (17.6 kDa class I heat shock protein OS=Solanum peruvianum PE=2 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 5.048e-43
Identity = 93/162 (57.41%), Postives = 105/162 (64.81%), Query Frame = 3
Query:   90 MSLIPSFFGNRRS-SVSDPFALDVWDPFRDFPFPSGYSSALSSQSPPETSAVVNARVDWKETPEAHVFKTDLPGLXXXXXXXXXXXXXXLQISGQRNIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQIKASMESGXXXXXXXXXXXXXXXXXAIEISG 572
            MSLIP  FG+RRS SV DPF++DV+DPF++  F    S         ETSA  N R+DWKETPEAHVFK DLPGL              LQISG+RN+EKEDKNDTWHRVERSSG F RRFRLPEN KMDQ+KASME+G                 +IEISG
Sbjct:    1 MSLIPRIFGDRRSTSVFDPFSIDVFDPFKELGFTVSNSG--------ETSAFANTRIDWKETPEAHVFKADLPGLKKEEVKVEVEEDRVLQISGERNVEKEDKNDTWHRVERSSGKFMRRFRLPENAKMDQVKASMENGVLTVTVPKEEVNNPDVKSIEISG 154          
The following BLAST results are available for this feature:
BLAST of CK936654 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 39
Match NameE-valueIdentityDescription
HSP16_SOYBN4.264e-5060.8718.5 kDa class I heat shock protein OS=Glycine max... [more]
HSP11_SOYBN6.157e-4961.4917.3 kDa class I heat shock protein OS=Glycine max... [more]
HSP12_MEDSA1.791e-4860.2518.2 kDa class I heat shock protein OS=Medicago sa... [more]
HSP13_SOYBN4.412e-4759.6317.5 kDa class I heat shock protein OS=Glycine max... [more]
HSP11_PEA2.860e-4659.0118.1 kDa class I heat shock protein OS=Pisum sativ... [more]
HSP14_SOYBN3.735e-4658.3917.5 kDa class I heat shock protein OS=Glycine max... [more]
HS17B_ARATH1.569e-4458.0217.6 kDa class I heat shock protein 2 OS=Arabidops... [more]
HS178_ARATH2.677e-4462.8617.8 kDa class I heat shock protein OS=Arabidopsis... [more]
HSP11_DAUCA5.963e-4455.2817.8 kDa class I heat shock protein OS=Daucus caro... [more]
HSP12_SOLPE5.048e-4357.4117.6 kDa class I heat shock protein OS=Solanum per... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004519_G05 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0001_IIF_G05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK936654 ID=CK936654; Name=CK936654; organism=Citrus sinensis; type=EST; length=717bp
GGGGATAGTTGTATAAATACCCAATCACTTACCCTCTTATTCGCATCAGC
AGCAAAATACCGAAAGCCGTATCACTCTATTGAGAAACGATGTCGTTGAT
TCCAAGCTTCTTCGGAAACCGACGCAGCAGTGTCTCTGATCCATTTGCAC
TCGACGTTTGGGATCCATTCAGGGACTTCCCTTTCCCTTCCGGTTATTCG
TCTGCGCTGTCCTCTCAGTCCCCTCCAGAAACCTCTGCTGTCGTTAATGC
CCGCGTGGACTGGAAGGAAACCCCGGAAGCCCACGTGTTCAAGACCGATC
TTCCGGGGCTCAGGAAAGAGGAAGTGAAGGTCGAGGTCGAAGACGACAGG
GTGCTTCAGATAAGCGGTCAGAGGAATATTGAGAAGGAAGACAAGAACGA
CACGTGGCATCGCGTTGAGCGCAGCAGTGGCATGTTCTCGAGGAGGTTCA
GGTTGCCTGAGAATGTGAAGATGGATCAGATTAAGGCTTCCATGGAGAGT
GGTGTGCTCACTGTTACTGTTCCGAAAGTGGAGGTGACCAAACCTGATGT
TAAGGCTATCGAAATCTCTGGTTAAACCAGTGTCTGTCTGTATGTCTTTA
TGCATACTTGTATAAGGATGCTGTGATGTTTTGGTTTTGTAATTTGCTTG
CATGAATGTTTGTGTAATGGTATTCTGGGTGTAATCAATAAACTGGACTG
TTTTTTGAAAAAAAAAA
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