CK936651
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK936651 vs. ExPASy Swiss-Prot
Match: LAH1_YEAST (La protein homolog OS=Saccharomyces cerevisiae GN=LAH1 PE=1 SV=2) HSP 1 Score: 82.8037 bits (203), Expect = 2.798e-15 Identity = 51/152 (33.55%), Postives = 84/152 (55.26%), Query Frame = 1 Query: 316 KDHENSSTPAVLTDDLKQRIIKQVEYYFSDENLPTDKYMMNLIRKNKEGFVPISVIASFRKLKRLTRNHAWIVAALRESSLLVVSSNGKKVKRLNPLPVTEVRDPKL----FTVLVENLPED--------HSVENMQRIFAEAGKIKSICIR 735 + NS T ++ R +KQVE+YFS+ N P D+++ KN +G+VPIS IA+F ++K+ R ++ ALR S +L VS++G+ VKR PL +T R+ ++ T+ V N P + EN++ F + G+I + +R Sbjct: 14 QSRRNSFAVIEFTPEVLDRCLKQVEFYFSEFNFPYDRFLRTTAEKN-DGWVPISTIATFNRMKKY-RPVDKVIEALRSSEILEVSADGENVKRRVPLDLTAARNARIEQNQRTLAVMNFPHEDVEASQIPELQENLEAFFKKLGEINQVRLR 163
BLAST of CK936651 vs. ExPASy Swiss-Prot
Match: LARP7_DANRE (La-related protein 7 OS=Danio rerio GN=larp7 PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 4.772e-15 Identity = 47/161 (29.19%), Postives = 87/161 (54.04%), Query Frame = 1 Query: 301 CEDPIKDHENSSTPAVLTDDLKQRIIKQVEYYFSDENLPTDKYMMNLIRKNKEGFVPISVIASFRKLKRLTRNHAWIVAALRESSLLVVSSNGKKVKRLNPLPVTEVRDPKLFTVLVENLPEDHSVENMQRIFAEAGKIKSICIRDPNVVEESKKSSKYEY 783 C D + +N L + KQVE++F D NL D++M ++I ++++G++ I+V+ +F ++K LT + I AL+ S+++ V+ G +++R PL T +D TV VE LP+ + ++R+F++ G + I I SK + E+ Sbjct: 22 CADLSEKKDNEKKKRSRVKQLLSDVKKQVEFWFGDVNLHKDRFMKSIIEQSRDGYIDIAVLTTFNRMKNLTADVKLIARALKNSTIVEVNDEGTRIRRKEPLGETP-KDVDSRTVYVELLPKTVTHIWLERVFSKCGHVVYISIPRYKSTRHSKGFAFVEF 181
BLAST of CK936651 vs. ExPASy Swiss-Prot
Match: LARP7_MOUSE (La-related protein 7 OS=Mus musculus GN=Larp7 PE=1 SV=2) HSP 1 Score: 81.2629 bits (199), Expect = 8.140e-15 Identity = 43/120 (35.83%), Postives = 74/120 (61.67%), Query Frame = 1 Query: 373 IIKQVEYYFSDENLPTDKYMMNLIRKNKEGFVPISVIASFRKLKRLTRNHAWIVAALRESSLLVVSSNGKKVKRLNPLPVTEVRDPKLFTVLVENLPEDHSVENMQRIFAEAGKIKSICI 732 I KQV+++F D NL DK++ I K+++G+V IS++ SF K+K+LT + I AL+ SS++ + G +++R PL +D + TV VE LP++ + ++R+F + G + I I Sbjct: 32 IAKQVDFWFGDANLHKDKFLREQIEKSRDGYVDISLLVSFNKMKKLTTDGKLIARALKSSSVVELDLEGTRIRRKKPLG-ERPKDEEERTVYVELLPKNVTHSWIERVFGKCGNVVYISI 150
BLAST of CK936651 vs. ExPASy Swiss-Prot
Match: LARP7_RAT (La-related protein 7 OS=Rattus norvegicus GN=Larp7 PE=1 SV=2) HSP 1 Score: 80.1073 bits (196), Expect = 1.813e-14 Identity = 42/120 (35.00%), Postives = 74/120 (61.67%), Query Frame = 1 Query: 373 IIKQVEYYFSDENLPTDKYMMNLIRKNKEGFVPISVIASFRKLKRLTRNHAWIVAALRESSLLVVSSNGKKVKRLNPLPVTEVRDPKLFTVLVENLPEDHSVENMQRIFAEAGKIKSICI 732 I KQV+++F D NL D+++ I K+++G+V IS++ SF K+K+LT + I AL+ SS++ + G +++R PL +D + TV VE LP++ + ++R+F + G + I I Sbjct: 33 IAKQVDFWFGDANLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDGKLIARALKSSSVVELDLEGTRIRRKKPLG-ERPKDEEERTVYVELLPKNVTHSWIERVFGKCGNVVYISI 151
BLAST of CK936651 vs. ExPASy Swiss-Prot
Match: LARP7_MACFA (La-related protein 7 OS=Macaca fascicularis GN=LARP7 PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.813e-14 Identity = 46/140 (32.86%), Postives = 80/140 (57.14%), Query Frame = 1 Query: 313 IKDHENSSTPAVLTDDLKQRIIKQVEYYFSDENLPTDKYMMNLIRKNKEGFVPISVIASFRKLKRLTRNHAWIVAALRESSLLVVSSNGKKVKRLNPLPVTEVRDPKLFTVLVENLPEDHSVENMQRIFAEAGKIKSICI 732 ++ + S VL D I KQV+++F D NL D+++ I K+++G+V IS++ SF K+K+LT + I ALR S+++ + G +++R PL +D TV VE LP++ + ++R+F + G + I I Sbjct: 23 VEKKKRSRVKQVLAD-----IAKQVDFWFGDANLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDGKLIARALRSSAVVELDLEGTRIRRKKPLG-ERPKDEDERTVYVELLPKNVNHSWIERVFGKCGNVVYISI 156
BLAST of CK936651 vs. ExPASy Swiss-Prot
Match: LARP7_HUMAN (La-related protein 7 OS=Homo sapiens GN=LARP7 PE=1 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.813e-14 Identity = 46/140 (32.86%), Postives = 80/140 (57.14%), Query Frame = 1 Query: 313 IKDHENSSTPAVLTDDLKQRIIKQVEYYFSDENLPTDKYMMNLIRKNKEGFVPISVIASFRKLKRLTRNHAWIVAALRESSLLVVSSNGKKVKRLNPLPVTEVRDPKLFTVLVENLPEDHSVENMQRIFAEAGKIKSICI 732 ++ + S VL D I KQV+++F D NL D+++ I K+++G+V IS++ SF K+K+LT + I ALR S+++ + G +++R PL +D TV VE LP++ + ++R+F + G + I I Sbjct: 23 VEKKKRSRVKQVLAD-----IAKQVDFWFGDANLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDGKLIARALRSSAVVELDLEGTRIRRKKPLG-ERPKDEDERTVYVELLPKNVNHSWIERVFGKCGNVVYISI 156
BLAST of CK936651 vs. ExPASy Swiss-Prot
Match: LARP7_XENTR (La-related protein 7 OS=Xenopus tropicalis GN=larp7 PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 4.040e-14 Identity = 45/139 (32.37%), Postives = 81/139 (58.27%), Query Frame = 1 Query: 316 KDHENSSTPAVLTDDLKQRIIKQVEYYFSDENLPTDKYMMNLIRKNKEGFVPISVIASFRKLKRLTRNHAWIVAALRESSLLVVSSNGKKVKRLNPLPVTEVRDPKLFTVLVENLPEDHSVENMQRIFAEAGKIKSICI 732 KD E V L I KQV+++F D NL D+++ I K ++G++ IS++ASF K+K++T + I A++ SS++ ++ +G K++R PL + +D TV VE LP++ + ++R+F + G + + I Sbjct: 23 KDREKKKRSRV--KQLLADIAKQVDFWFGDVNLHKDRFLREQIEKTRDGYIDISLLASFNKMKKITTDSKLIARAVKNSSVVEINLSGTKIRRRFPLG-EKPQDVDSRTVYVELLPKNVTHSWIERVFGKYGMVVYVSI 158
BLAST of CK936651 vs. ExPASy Swiss-Prot
Match: LARP6_MOUSE (La-related protein 6 OS=Mus musculus GN=Larp6 PE=1 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 8.999e-14 Identity = 47/176 (26.70%), Postives = 90/176 (51.14%), Query Frame = 1 Query: 304 EDPIKDHENSSTPAVLTD-------------DLKQRIIKQVEYYFSDENLPTDKYMMNLIRKNKEGFVPISVIASFRKLKRLTRNHAWIVAALRESSLLVVSSNGKKVKRLNPLPVTEVRD--------------PKLFTVLV---ENLPEDHSVENMQRIFAEAGKIKSICIRDP 741 E+P + H +++T D +L ++++ Q+E+YFSDENL D +++ +R+NK G+V + ++ SF+K+K LTR+ AL+ S L ++ + +KV+R P+P+ + PKL+ + ++ +E++ ++F G I S+ I P Sbjct: 60 EEPSRGHSSATTSGGENDREDLEPEWRPPDEELIRKLVDQIEFYFSDENLEKDAFLLKHVRRNKLGYVSVKLLTSFKKVKHLTRDWRTTAHALKYSVTLELNEDHRKVRRTTPVPLFPNENLPSKMLLVYDLHLSPKLWALATPQKNGRVQEKVMEHLLKLFGTFGVISSVRILKP 235
BLAST of CK936651 vs. ExPASy Swiss-Prot
Match: LARP6_HUMAN (La-related protein 6 OS=Homo sapiens GN=LARP6 PE=1 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 8.999e-14 Identity = 42/146 (28.77%), Postives = 82/146 (56.16%), Query Frame = 1 Query: 355 DDLKQRIIKQVEYYFSDENLPTDKYMMNLIRKNKEGFVPISVIASFRKLKRLTRNHAWIVAALRESSLLVVSSNGKKVKRLNPLPVTEVRD--------------PKLFTVLV---ENLPEDHSVENMQRIFAEAGKIKSICIRDP 741 ++L ++++ Q+E+YFSDENL D +++ +R+NK G+V + ++ SF+K+K LTR+ AL+ S +L ++ + +KV+R P+P+ + PKL+ + ++ +E++ ++F G I S+ I P Sbjct: 90 EELIKKLVDQIEFYFSDENLEKDAFLLKHVRRNKLGYVSVKLLTSFKKVKHLTRDWRTTAHALKYSVVLELNEDHRKVRRTTPVPLFPNENLPSKMLLVYDLYLSPKLWALATPQKNGRVQEKVMEHLLKLFGTFGVISSVRILKP 235
BLAST of CK936651 vs. ExPASy Swiss-Prot
Match: LA_RAT (Lupus La protein homolog OS=Rattus norvegicus GN=Ssb PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 2.217e-12 Identity = 46/132 (34.85%), Postives = 77/132 (58.33%), Query Frame = 1 Query: 361 LKQRIIKQVEYYFSDENLPTDKYMMNLIRKNKEGFVPISVIASFRKLKRLTRNHAWIVAALRES--SLLVVSSNGKKVKRLNPLPVTEV-----RDPKLFTVLVENLPEDHSVENMQRIFAEAGKIKSICIR 735 L+ +I Q+EYYF D NLP DK++ I K EG+VP+ + F +L RLT + IV AL +S +L+ VS++ K++R P+ EV D K +V ++ P D ++++++ + G+I +I +R Sbjct: 13 LEAKICHQIEYYFGDFNLPRDKFLKEQI-KLDEGWVPLETMIKFNRLNRLTTDFNVIVQALSKSKANLMEVSADKTKIRRSPSRPLPEVTDEYKNDVKNRSVYIKGFPTDATLDDIKEWLDDKGQILNIQMR 143 The following BLAST results are available for this feature:
BLAST of CK936651 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
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Sequences
The
following sequences are available for this feature:
EST sequence >CK936651 ID=CK936651; Name=CK936651; organism=Citrus sinensis; type=EST; length=873bpback to top |