CX675171

Overview
NameCX675171
Unique NameCX675171
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length717
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX675171 vs. ExPASy Swiss-Prot
Match: GDL62_ARATH (GDSL esterase/lipase At4g10955 OS=Arabidopsis thaliana GN=At4g10955 PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.927e-26
Identity = 53/99 (53.54%), Postives = 70/99 (70.71%), Query Frame = -2 
Query:  420 NPADDICSEYXGYFEHRKKMEEIGAGAIEKWATQHSLGGLFMNAIGKGNVANTSEPLHLIPSANVIVNSTPARDLKEAHGIHQWWKRDVQLKSQLYSYK 716
            NP D +CSEY GYFEHR KMEEIG G +E+ ATQHSLGG+ +            EP+HLIPS+ + VN + +RD K+AHGIHQWW+ D + ++++Y YK
Sbjct:  261 NPGDHLCSEYVGYFEHRNKMEEIGIGFVERVATQHSLGGMLLGG---------QEPVHLIPSSVLTVNLSSSRDFKQAHGIHQWWREDNKFETKVYQYK 350
The following BLAST results are available for this feature:
BLAST of CX675171 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
GDL62_ARATH1.927e-2653.54GDSL esterase/lipase At4g10955 OS=Arabidopsis thal... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS08_60C12_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-60C12-E24-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX675171 ID=CX675171; Name=CX675171; organism=Citrus sinensis; type=EST; length=717bp
ATTCCAGTCCTGATATTTATTGACCATGGTGGCATTTACAGTTTACTCAC
TCACTGTGTCCGTGATTTGTAGAGAGATCTAACCTAAGAATTAAGCGCCA
TTCTGTGTCGCAGAATGAGTGAGCTGTTTGGCTATAGGCTGCTGGCTGCT
CCTCTTCTCCCGATTTCAGCAATAAAACGCCTGATTTTCAACTTTTCAAT
TTTCGGAGTGAACTGTAAATAGGAACCACCATTGCAAGTTACAACTAGCA
AGCGAATCACTCGTTACATTACTCTATTGGACATTTATTCTTAAAGCTCT
CCAAGCATTTAAAGAAAATATTTAAATCCATCCCATATTACACGAAGGGC
ATATCTCAATCATTGGTTACCTACGGATATAGACATAATTGGCCGATTTC
TTTTACAAAGTGAAAACTACTTGTAGCTGTAAAGCTGAGACTTCAACTGC
ACATCACGTTTCCACCATTGGTGAATTCCATGGGCTTCTTTGAGATCCCG
TGCAGGAGTTGAATTAACTATCACATTTGCCGATGGAATCAGGTGCAGAG
GTTCTGACGTATTCGCCACATTACCCTTTCCTATTGCATTCATAAATAGA
CCTCCAAGAGAATGTTGTGTCGCCCATTTCTCAATGGCCCCTGCTCCGAT
CTCCTCCATCTTCTTCCTATGTTCAAAATACCCNATATACTCTGAGCAGA
TGTCGTCGGCTGGGTTC
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