CK936644

Overview
NameCK936644
Unique NameCK936644
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length635
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8201 contig Csv1_Contig8201:412..1046. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK936644 vs. ExPASy Swiss-Prot
Match: PYR5_TOBAC (Uridine 5'-monophosphate synthase (Fragment) OS=Nicotiana tabacum GN=PYR5-6 PE=2 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 8.455e-49
Identity = 96/115 (83.48%), Postives = 101/115 (87.83%), Query Frame = 1
Query:   52 AEMSSAGNLAKGDYTAAAVKIAEDHSDFVIGFISVNPASWPGAPVNPAFIQATPGVQMVKGGDDLGQQYNTPYSVIYDRGSDIIIVGRGIIKAADPALAAREYRLQGWEAYLAKC 396
            AEMSSAGNLA G YTAAAVKIAEDHSDFVIGFISVNPASWP AP NP+ I ATPGVQ+VKGGD LGQ YNTP +VI DRGSDIIIVGRGIIKAA+P  AAREYRLQGW+AYL  C
Sbjct:  346 AEMSSAGNLATGAYTAAAVKIAEDHSDFVIGFISVNPASWPNAPGNPSLIHATPGVQLVKGGDALGQLYNTPSAVIADRGSDIIIVGRGIIKAANPIEAAREYRLQGWDAYLVNC 460          
BLAST of CK936644 vs. ExPASy Swiss-Prot
Match: PYR5_ARATH (Uridine 5'-monophosphate synthase OS=Arabidopsis thaliana GN=PYRE-F PE=2 SV=2)

HSP 1 Score: 183.726 bits (465), Expect = 6.699e-46
Identity = 92/116 (79.31%), Postives = 99/116 (85.34%), Query Frame = 1
Query:   52 AEMSSAGNLAKGDYTAAAVKIAEDHSDFVIGFISVNPASWPGAPVNPAFIQATPGVQMVKGGDDLGQQYNTPYSVIYDRGSDIIIVGRGIIKAADPALAAREYRLQGWEAYLAKCS 399
            AEMSSAGNLA GDYTAAAVKIA+ HSDFV+GFISVNPASW    V P+ I ATPGVQMVKGGD LGQQYNTP+SVI +RGSDIIIVGRGIIKA +PA  A EYR+QGW AYL KCS
Sbjct:  360 AEMSSAGNLATGDYTAAAVKIADAHSDFVMGFISVNPASWKCGYVYPSMIHATPGVQMVKGGDALGQQYNTPHSVITERGSDIIIVGRGIIKAENPAETAHEYRVQGWNAYLEKCS 475          
BLAST of CK936644 vs. ExPASy Swiss-Prot
Match: PYR5_HUMAN (Uridine 5'-monophosphate synthase OS=Homo sapiens GN=UMPS PE=1 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 3.569e-31
Identity = 70/114 (61.40%), Postives = 84/114 (73.68%), Query Frame = 1
Query:   52 AEMSSAGNLAKGDYTAAAVKIAEDHSDFVIGFISVNPASWPGAPVNPAFIQATPGVQMVKGGDDLGQQYNTPYSVIYDRGSDIIIVGRGIIKAADPALAAREYRLQGWEAYLAK 393
            AEMSS G+LA GDYT AAV++AE+HS+FV+GFIS +  S     + P F+  TPGVQ+  GGD+LGQQYN+P  VI  RGSDIIIVGRGII AAD   AA  YR   WEAYL++
Sbjct:  369 AEMSSTGSLATGDYTRAAVRMAEEHSEFVVGFISGSRVS-----MKPEFLHLTPGVQLEAGGDNLGQQYNSPQEVIGKRGSDIIIVGRGIISAADRLEAAEMYRKAAWEAYLSR 477          
BLAST of CK936644 vs. ExPASy Swiss-Prot
Match: PYR5_PONAB (Uridine 5'-monophosphate synthase OS=Pongo abelii GN=UMPS PE=2 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 4.661e-31
Identity = 70/114 (61.40%), Postives = 84/114 (73.68%), Query Frame = 1
Query:   52 AEMSSAGNLAKGDYTAAAVKIAEDHSDFVIGFISVNPASWPGAPVNPAFIQATPGVQMVKGGDDLGQQYNTPYSVIYDRGSDIIIVGRGIIKAADPALAAREYRLQGWEAYLAK 393
            AEMSS G+LA GDYT AAV++AE+HS+FV+GFIS +  S     + P F+  TPGVQ+  GGD+LGQQYN+P  VI  RGSDIIIVGRGII AAD   AA  YR   WEAYL++
Sbjct:  369 AEMSSTGSLATGDYTRAAVRMAEEHSEFVVGFISGSRVS-----MKPEFLHLTPGVQLEAGGDNLGQQYNSPQEVIGKRGSDIIIVGRGIISAADCLEAAEMYRKAAWEAYLSR 477          
BLAST of CK936644 vs. ExPASy Swiss-Prot
Match: PYR5_BOVIN (Uridine 5'-monophosphate synthase OS=Bos taurus GN=UMPS PE=2 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.499e-29
Identity = 68/114 (59.65%), Postives = 84/114 (73.68%), Query Frame = 1
Query:   52 AEMSSAGNLAKGDYTAAAVKIAEDHSDFVIGFISVNPASWPGAPVNPAFIQATPGVQMVKGGDDLGQQYNTPYSVIYDRGSDIIIVGRGIIKAADPALAAREYRLQGWEAYLAK 393
            AEMSSAG LA G YT AAV++AE+HS+FVIGFIS +  S     + P F+  TPGVQ+  GGD+LGQQY++P  VI  RGSDIIIVGRGII +A+   AA+ YR   WEAYL++
Sbjct:  369 AEMSSAGTLATGSYTEAAVQMAEEHSEFVIGFISGSRVS-----MKPEFLHLTPGVQLEAGGDNLGQQYHSPQEVIGKRGSDIIIVGRGIIASANQLEAAKMYRKAAWEAYLSR 477          
BLAST of CK936644 vs. ExPASy Swiss-Prot
Match: PYR5_MOUSE (Uridine 5'-monophosphate synthase OS=Mus musculus GN=Umps PE=2 SV=3)

HSP 1 Score: 127.102 bits (318), Expect = 7.442e-29
Identity = 67/114 (58.77%), Postives = 82/114 (71.93%), Query Frame = 1
Query:   52 AEMSSAGNLAKGDYTAAAVKIAEDHSDFVIGFISVNPASWPGAPVNPAFIQATPGVQMVKGGDDLGQQYNTPYSVIYDRGSDIIIVGRGIIKAADPALAAREYRLQGWEAYLAK 393
            AEMSSAG+LA G+YT AAV +AE+H +FVIGFIS +  S     + P F+  TPGVQ+  GGD LGQQYN+P  VI  RGSD+IIVGRGI+ AA+   AA  YR   WEAYL++
Sbjct:  369 AEMSSAGSLATGNYTKAAVGMAEEHCEFVIGFISGSRVS-----MKPEFLHLTPGVQLETGGDHLGQQYNSPQEVIGKRGSDVIIVGRGILAAANRLEAAEMYRKAAWEAYLSR 477          
BLAST of CK936644 vs. ExPASy Swiss-Prot
Match: PYRF_PENCH (Orotidine 5'-phosphate decarboxylase OS=Penicillium chrysogenum GN=pyrG PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.606e-23
Identity = 59/117 (50.43%), Postives = 76/117 (64.96%), Query Frame = 1
Query:   52 AEMSSAGNLAKGDYTAAAVKIAEDHSDFVIGFIS---VNPASWPGAPVNPAFIQATPGVQMVKGGDDLGQQYNTPYSVIYDRGSDIIIVGRGIIKAADPALAAREYRLQGWEAYLAK 393
            AEM+S G+LA G YT+A+V IA  +  FV+GF+S   +       AP +  F+  T GV +   GD LGQQY TP S +  RG+D II GRGI  AADP  AA++Y+ QGWEAYLA+
Sbjct:  159 AEMTSKGSLATGAYTSASVDIARKYPSFVLGFVSTRSLGEVESTEAPASEDFVVFTTGVNLSSKGDKLGQQYQTPQSAV-GRGADFIISGRGIYAAADPVEAAKQYQQQGWEAYLAR 274          
BLAST of CK936644 vs. ExPASy Swiss-Prot
Match: PYRF_PENCA (Orotidine 5'-phosphate decarboxylase OS=Penicillium camembertii GN=pyrG PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 3.577e-23
Identity = 60/118 (50.85%), Postives = 75/118 (63.56%), Query Frame = 1
Query:   52 AEMSSAGNLAKGDYTAAAVKIAEDHSDFVIGFISVNPASWPGAPVNPA----FIQATPGVQMVKGGDDLGQQYNTPYSVIYDRGSDIIIVGRGIIKAADPALAAREYRLQGWEAYLAK 393
            AEM+S G+LA G YT+A+V IA  +  FV+GF+S        +   PA    F+  T GV +   GD LGQQY TP S I  RG+D II GRGI  AADP  AA++Y+ QGWEAYLA+
Sbjct:  156 AEMTSKGSLATGSYTSASVDIARKYPSFVLGFVSTRSLGEVESTEAPAQGEDFVVFTTGVNLSSKGDKLGQQYQTPQSAI-GRGADFIISGRGIYAAADPVEAAKQYQQQGWEAYLAR 272          
BLAST of CK936644 vs. ExPASy Swiss-Prot
Match: PYRF_PENNA (Orotidine 5'-phosphate decarboxylase OS=Penicillium nalgiovense GN=pyrG PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 7.969e-23
Identity = 59/118 (50.00%), Postives = 75/118 (63.56%), Query Frame = 1
Query:   52 AEMSSAGNLAKGDYTAAAVKIAEDHSDFVIGFISVNPASWPGAPVNPA----FIQATPGVQMVKGGDDLGQQYNTPYSVIYDRGSDIIIVGRGIIKAADPALAAREYRLQGWEAYLAK 393
            AEM+S G+LA G YT+A+V IA  +  FV+GF+S        +   PA    F+  T GV +   GD LGQQY TP S +  RG+D II GRGI  AADP  AA++Y+ QGWEAYLA+
Sbjct:  156 AEMTSKGSLATGAYTSASVDIARKYPSFVLGFVSTRSLGEVESTEAPAQGEDFVVFTTGVNLSSKGDKLGQQYQTPQSAV-GRGADFIISGRGIYAAADPVEAAKQYQQQGWEAYLAR 272          
BLAST of CK936644 vs. ExPASy Swiss-Prot
Match: PYRF_CLAFU (Orotidine 5'-phosphate decarboxylase OS=Cladosporium fulvum GN=PYR1 PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 7.969e-23
Identity = 58/118 (49.15%), Postives = 75/118 (63.56%), Query Frame = 1
Query:   52 AEMSSAGNLAKGDYTAAAVKIAEDHSDFVIGFISVNPASWPGAPVNPA----FIQATPGVQMVKGGDDLGQQYNTPYSVIYDRGSDIIIVGRGIIKAADPALAAREYRLQGWEAYLAK 393
            AEM+S G+LA G+YT+A+V  A  +  FV+GF+S    +   + V  A    F+  T GV +   GD LGQQY TP S I  RG+D II GRGI  A DP  AA++Y+ QGWEAYLA+
Sbjct:  156 AEMTSKGSLATGEYTSASVDYARKYPSFVLGFVSTRALTEVSSTVTAADNEDFVVFTTGVNLSSKGDKLGQQYQTPQSAI-GRGADFIIAGRGIYTAPDPVEAAKQYQQQGWEAYLAR 272          
The following BLAST results are available for this feature:
BLAST of CK936644 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 65
Match NameE-valueIdentityDescription
PYR5_TOBAC8.455e-4983.48Uridine 5'-monophosphate synthase (Fragment) OS=Ni... [more]
PYR5_ARATH6.699e-4679.31Uridine 5'-monophosphate synthase OS=Arabidopsis t... [more]
PYR5_HUMAN3.569e-3161.40Uridine 5'-monophosphate synthase OS=Homo sapiens ... [more]
PYR5_PONAB4.661e-3161.40Uridine 5'-monophosphate synthase OS=Pongo abelii ... [more]
PYR5_BOVIN1.499e-2959.65Uridine 5'-monophosphate synthase OS=Bos taurus GN... [more]
PYR5_MOUSE7.442e-2958.77Uridine 5'-monophosphate synthase OS=Mus musculus ... [more]
PYRF_PENCH1.606e-2350.43Orotidine 5'-phosphate decarboxylase OS=Penicilliu... [more]
PYRF_PENCA3.577e-2350.85Orotidine 5'-phosphate decarboxylase OS=Penicilliu... [more]
PYRF_PENNA7.969e-2350.00Orotidine 5'-phosphate decarboxylase OS=Penicilliu... [more]
PYRF_CLAFU7.969e-2349.15Orotidine 5'-phosphate decarboxylase OS=Cladospori... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004520_A01 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0001_IIIF_A01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK936644 ID=CK936644; Name=CK936644; organism=Citrus sinensis; type=EST; length=635bp
GGGGGTCTGAAATTAAAGGGATTGCCTCGTGGTAGGGGTCTGTTGCTACT
GGCTGAGATGAGCTCAGCTGGTAACCTAGCAAAGGGAGACTATACAGCAG
CAGCTGTGAAAATTGCCGAGGATCATTCTGATTTTGTCATTGGATTCATC
TCAGTTAATCCAGCATCATGGCCAGGGGCACCAGTCAATCCAGCCTTTAT
TCAAGCAACCCCTGGAGTTCAAATGGTAAAGGGAGGTGATGATCTAGGCC
AACAATATAACACTCCATACTCGGTCATCTACGATAGGGGTAGTGACATA
ATTATTGTGGGTCGTGGAATTATAAAGGCAGCAGACCCTGCATTGGCAGC
CCGTGAGTACCGGCTTCAAGGATGGGAGGCCTACTTGGCTAAGTGCAGCT
GATCCTCCATTTAGGTCTGGACTTCTGTTCGCTTCAACGGTTGCGATAAT
GAACAGATCAGTCAAGTTCTGTTTAATATACCATGCATTGGTATGTCTTA
TGAAACCGAGAGAGTTTGAAGCTTTTGGCTGCATTGTACTTATAGTAACT
TCTCAAGTCTGGTAATGCTGCTTGTCTGGTTTTCCCAATGAAACATGGTT
GCAAGATTTCTGAGTTTTGTGTTATCAACAATATA
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