CX675169
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX675169 vs. ExPASy Swiss-Prot
Match: LDL1_ARATH (Lysine-specific histone demethylase 1 homolog 1 OS=Arabidopsis thaliana GN=LDL1 PE=1 SV=1) HSP 1 Score: 395.586 bits (1015), Expect = 1.790e-109 Identity = 203/275 (73.82%), Postives = 220/275 (80.00%), Query Frame = 1 Query: 1 SIRSEHKTLVDSAYDFLLEHGYINFGLAPPIKEVKLGSFGRVERXXXXXXXXXXXXXXXXRQLISMGFKVVVLEGRERPGGRVKTRKMKCXXXXXXXXXXX-SVLTGINGNPLGVLARQLELPLHKVRDICPLYLPNGKAIDADIDSGVEVSFNKLLDRVCKLRHDMIEEFKSVDVPLGVALEAFRNVYKVAEDLQERMLLNWHLANLEYANASLMSNLSMAYWDQDDPYEMGGDHCFIPGGNERFVRALAEDLPIFYQRTVQSIRYGVDGVMVY 822 SIR+EHKTLVD+AY+FLLEHGYINFGLAP IKE KL SF VE RQL+SMGF+V+VLEGR+RPGGRVKTRKMK SVLTGINGNPLGVLARQL LPLHKVRDICPLYLPNG+ DA +DS +E SFNKLLDRVCKLR MIEE KSVDVPLG ALE FR VY VAED QERMLL+WHLANLEYANA+L+ NLSMAYWDQDDPYEMGGDHCFIPGGNE FV ALAE+LPIFY TV+SIRYG +GV+VY Sbjct: 222 SIRAEHKTLVDTAYNFLLEHGYINFGLAPVIKEAKLRSFDGVEPPNVVVVGAGLAGLVAARQLLSMGFRVLVLEGRDRPGGRVKTRKMKGGDGVEAMADVGGSVLTGINGNPLGVLARQLGLPLHKVRDICPLYLPNGELADASVDSKIEASFNKLLDRVCKLRQSMIEENKSVDVPLGEALETFRLVYGVAEDQQERMLLDWHLANLEYANATLLGNLSMAYWDQDDPYEMGGDHCFIPGGNEIFVHALAENLPIFYGSTVESIRYGSNGVLVY 496
BLAST of CX675169 vs. ExPASy Swiss-Prot
Match: LDL1_ORYSJ (Lysine-specific histone demethylase 1 homolog 1 OS=Oryza sativa subsp. japonica GN=Os02g0755200 PE=2 SV=1) HSP 1 Score: 301.212 bits (770), Expect = 4.595e-81 Identity = 155/280 (55.36%), Postives = 194/280 (69.29%), Query Frame = 1 Query: 1 SIRSEHKTLVDSAYDFLLEHGYINFGLAPPIKEVKLGSFGRVERXXXXXXXXXXXXXXXXRQLISMGFKVVVLEGRERPGGRVKTRKMKCXXXXXXXXXXX-----SVLTGINGNPLGVLARQLELPLHKVRDICPLYLPNGKAIDADIDSGVEVSFNKLLDRVCKLRHDMIEEFK-SVDVPLGVALEAFRNVYKVAEDLQERMLLNWHLANLEYANASLMSNLSMAYWDQDDPYEMGGDHCFIPGGNERFVRALAEDLPIFYQRTVQSIRYGVDGVMVY 822 SIR+EH LV +A+ FL +H YINFGLAP + + + R L+S+GFKV ++EGR RPGGRV T+ M+ SVLTGINGNPLGV+ARQL PLHKVRD CPLYLP+G+ +D D+D+ VE +FN+LLD+VC+LR + + VDV LG+ALEAFR + VA + +ERMLL+WHLANLEYANA+ + +LSMA+WDQDDPYEMGGDHCFIPGGN RFVRALA+ +PIFY + V+ I+YG DG MVY Sbjct: 227 SIRAEHAHLVAAAHSFLSDHAYINFGLAPSVISLPPCPPPSLPPPSVLIVGAGFAGLAAARHLMSLGFKVAIVEGRLRPGGRVFTKSMRSTAAEYPDIAAAADLGGSVLTGINGNPLGVIARQLGFPLHKVRDKCPLYLPDGRPVDPDMDARVEAAFNQLLDKVCQLRQVVADSIPHGVDVSLGMALEAFRAAHGVAAEREERMLLDWHLANLEYANAAPLVDLSMAFWDQDDPYEMGGDHCFIPGGNSRFVRALADGIPIFYGQNVRRIQYGCDGAMVY 506
BLAST of CX675169 vs. ExPASy Swiss-Prot
Match: LDL3_ARATH (Lysine-specific histone demethylase 1 homolog 3 OS=Arabidopsis thaliana GN=FLD PE=1 SV=1) HSP 1 Score: 275.404 bits (703), Expect = 2.700e-73 Identity = 148/276 (53.62%), Postives = 185/276 (67.03%), Query Frame = 1 Query: 1 SIRSEHKTLVDSAYDFLLEHGYINFGLAPPIKEVKLGSF-GRVERXXXXXXXXXXXXXXXXRQLISMGFKVVVLEGRERPGGRVKTRKMKCXXXXXXXXXXXSVLTGINGNPLGVLARQLELPLHKVRDICPLYLPNGKAIDADIDSGVEVSFNKLLDRVCKLRHDMIEEFKSVDVPLGVALEAFRNVYKVAEDLQERMLLNWHLANLEYANASLMSNLSMAYWDQDDPYEMGGDHCFIPGGNERFVRALAEDLPIFYQRTVQSIRYGVDGVMVYA 825 SI +L+DSAY++L+ HGYINFG+A IK+ F + + RQL+ GFKV VLEGR+RPGGRV T+KM+ SVLTG GNPLG++ARQL L+KVRD CPLY +GK +D D+D VEV+FN+LLD+ KLR M + S+DV LG ALE FR V +E L NWHLANLEYANA L+S LS+A+WDQDDPY+MGGDHCF+PGGN R V+ALAE++PI Y++TVQ+IRYG +GV V A Sbjct: 144 SIPKHCSSLLDSAYNYLVTHGYINFGIAQAIKD----KFPAQSSKSSVIIVGAGLSGLAAARQLMRFGFKVTVLEGRKRPGGRVYTKKMEANRVGAAADLGGSVLTGTLGNPLGIIARQLGSSLYKVRDKCPLYRVDGKPVDPDVDIKVEVAFNQLLDKASKLRQLMGDV--SMDVSLGAALETFRQVSGNDVATEEMGLFNWHLANLEYANAGLVSKLSLAFWDQDDPYDMGGDHCFLPGGNGRLVQALAENVPILYEKTVQTIRYGSNGVKVTA 413
BLAST of CX675169 vs. ExPASy Swiss-Prot
Match: LDL2_ARATH (Lysine-specific histone demethylase 1 homolog 2 OS=Arabidopsis thaliana GN=LDL2 PE=2 SV=1) HSP 1 Score: 266.544 bits (680), Expect = 1.254e-70 Identity = 144/275 (52.36%), Postives = 179/275 (65.09%), Query Frame = 1 Query: 1 SIRSEHKTLVDSAYDFLLEHGYINFGLAPPIKEV--KLGSFGRVERXXXXXXXXXXXXXXXXRQLISMGFKVVVLEGRERPGGRVKTRKMKCXXXXXXXXXXXSVLTGINGNPLGVLARQLELPLHKVRDICPLYLPNGKAIDADIDSGVEVSFNKLLDRVCKLRHDMIEEFKSVDVPLGVALEAFRNVYKVAEDLQERMLLNWHLANLEYANASLMSNLSMAYWDQDDPYEMGGDHCFIPGGNERFVRALAEDLPIFYQRTVQSIRYGVDGVMV 819 ++ S+ + L+ +AYDFLL +GYINFG++P + G+ G V RQL+S GFKV+VLEGR RPGGRV T+KM SV+TG++ NPLGVLARQL +PLHKVRD CPLY G +D DS VE FNKLLD+V ++R M E + + LG LE R +Y VA+D +ER L +WHLANLEYANA +SNLS AYWDQDDPYEMGGDHCF+ GGN R + ALAE LPI Y ++V +I+YG GV V Sbjct: 119 TVSSDFEHLISAAYDFLLFNGYINFGVSPLFAPYIPEEGTEGSV-----IVVGAGLAGLAAARQLLSFGFKVLVLEGRSRPGGRVYTQKMGGKDRFAAVELGGSVITGLHANPLGVLARQLSIPLHKVRDNCPLYNSEGVLVDKVADSNVEFGFNKLLDKVTEVREMM--EGAAKKISLGEVLETLRVLYGVAKDSEERKLFDWHLANLEYANAGCLSNLSAAYWDQDDPYEMGGDHCFLAGGNWRLINALAEGLPIIYGKSVDTIKYGDGGVEV 386
BLAST of CX675169 vs. ExPASy Swiss-Prot
Match: LDL3_ORYSI (Lysine-specific histone demethylase 1 homolog 3 OS=Oryza sativa subsp. indica GN=B0103C08-B0602B01.13 PE=2 SV=1) HSP 1 Score: 265.388 bits (677), Expect = 2.794e-70 Identity = 141/265 (53.21%), Postives = 176/265 (66.42%), Query Frame = 1 Query: 25 LVDSAYDFLLEHGYINFGLAPPIKEVKLGSFGRVERXXXXXXXXXXXXXXXXRQLISMGFKVVVLEGRERPGGRVKTRKMKCXXXXXXXXXXXSVLTGINGNPLGVLARQLELPLHKVRDICPLYLPNGKAIDADIDSGVEVSFNKLLDRVCKLRHDMIEEFKSVDVPLGVALEAFRNVYKVAEDLQERMLLNWHLANLEYANASLMSNLSMAYWDQDDPYEMGGDHCFIPGGNERFVRALAEDLPIFYQRTVQSIRYGVDGVMV 819 L+++AY FL+ HG+INFG+AP IKE R RQL++ GFKVVVLEGR+R GGRV T+KM+ SVLTG GNPLG++A+QL LP+HK+RD CPLY P+G +D ++D VE +FNKLLD+ LR M + ++DV LG ALE R QE L NWHLANLEYANA L+S LS+A+WDQDDPY+MGGDHCF+PGGN R V+ALAE++PI Y+RTV +IR G DGV V Sbjct: 164 LLNAAYSFLVSHGHINFGVAPAIKERIPKEPTR--HNTVIVVGAGLAGLAAARQLVAFGFKVVVLEGRKRCGGRVYTKKMEGGGRSAAGDLGGSVLTGTFGNPLGIVAKQLGLPMHKIRDKCPLYRPDGSPVDPEVDKKVEGTFNKLLDKSSLLRASMGDV--AMDVSLGAALETLRQTDGDLSTDQEMNLFNWHLANLEYANAGLLSKLSLAFWDQDDPYDMGGDHCFLPGGNGRLVQALAENVPIVYERTVHTIRNGGDGVQV 424
BLAST of CX675169 vs. ExPASy Swiss-Prot
Match: LDL3_ORYSJ (Lysine-specific histone demethylase 1 homolog 3 OS=Oryza sativa subsp. japonica GN=Os04g0560300 PE=2 SV=2) HSP 1 Score: 264.233 bits (674), Expect = 6.225e-70 Identity = 140/265 (52.83%), Postives = 176/265 (66.42%), Query Frame = 1 Query: 25 LVDSAYDFLLEHGYINFGLAPPIKEVKLGSFGRVERXXXXXXXXXXXXXXXXRQLISMGFKVVVLEGRERPGGRVKTRKMKCXXXXXXXXXXXSVLTGINGNPLGVLARQLELPLHKVRDICPLYLPNGKAIDADIDSGVEVSFNKLLDRVCKLRHDMIEEFKSVDVPLGVALEAFRNVYKVAEDLQERMLLNWHLANLEYANASLMSNLSMAYWDQDDPYEMGGDHCFIPGGNERFVRALAEDLPIFYQRTVQSIRYGVDGVMV 819 L+++AY FL+ HG+INFG+AP IKE R RQL++ GFKVVVLEGR+R GGRV T+KM+ SVLTG GNPLG++A+QL LP+HK+RD CPLY P+G +D ++D VE +FNKLLD+ LR M + ++DV LG ALE R QE L NWHLANLEYANA L+S LS+A+WDQDDPY+M GDHCF+PGGN R V++LAE++PI Y+RTV +IRYG DGV V Sbjct: 164 LLNAAYSFLVSHGHINFGVAPAIKERIPKEPTR--HNTVIVVGAGLAGLAAARQLVAFGFKVVVLEGRKRCGGRVYTKKMEGGGRSAAGDLGGSVLTGTFGNPLGIVAKQLGLPMHKIRDKCPLYRPDGSPVDPEVDKKVEGTFNKLLDKSSLLRASMGDV--AMDVSLGAALETLRQTDGDLSTDQEMNLFNWHLANLEYANAGLLSKLSLAFWDQDDPYDMVGDHCFLPGGNGRLVQSLAENVPIVYERTVHTIRYGGDGVQV 424
BLAST of CX675169 vs. ExPASy Swiss-Prot
Match: LDL2_ORYSJ (Lysine-specific histone demethylase 1 homolog 2 OS=Oryza sativa subsp. japonica GN=Os08g0143400 PE=2 SV=1) HSP 1 Score: 225.713 bits (574), Expect = 2.454e-58 Identity = 120/280 (42.86%), Postives = 170/280 (60.71%), Query Frame = 1 Query: 1 SIRSEHKTLVDSAYDFLLEHGYINFGLA-------PPIKEVKLGSFGRVERXXXXXXXXXXXXXXXXRQLISMGFKVVVLEGRERPGGRVKTRKMKCXXXXXXXXXXXSVLTGINGNPLGVLARQLELPLHKVRDICPLYLPNGKAIDADIDSGVEVSFNKLLDRVCKLRHDMIEEFKSVDVPLGVALEAFRNVYKVAEDLQERMLLNWHLANLEYANASLMSNLSMAYWDQDDPYEMGGDHCFIPGGNERFVRALAEDLPIFYQRTVQSIRYGVDGVMV 819 ++ + + LV A+ FL G+INFG++ PP +L + V RQL+ G +V+VLEGR RPGGRV T + SV+TGI+ NPLGVLARQL +PLHKVRD CPLY +G+ +D +D +++ FN LL+ +LR + + + + LG +E R YKVA+ ++ER +L+WHLANLE++NA +S LS+A+WDQDD YEMGGDHCF+ GGN R V AL + +P+ Y++TV+ I +G DGV + Sbjct: 119 TVAASYDNLVAVAHGFLAREGHINFGVSAAFPASPPPDAPQRLAASVLV-------VGAGLAGLAAARQLLRFGLRVLVLEGRARPGGRVYTTHL--GGDQAAVELGGSVITGIHTNPLGVLARQLGIPLHKVRDSCPLYHHDGRTVDMKLDRSMDLVFNTLLEHATRLREYLKKAAEGIS--LGEGIERLRRFYKVAKSVEEREVLDWHLANLEFSNAGCLSELSLAHWDQDDQYEMGGDHCFLAGGNARLVHALCDGVPVLYEKTVKRIEHGEDGVSI 387
BLAST of CX675169 vs. ExPASy Swiss-Prot
Match: KDM1B_MOUSE (Lysine-specific histone demethylase 1B OS=Mus musculus GN=Kdm1B PE=1 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.406e-21 Identity = 71/218 (32.57%), Postives = 104/218 (47.71%), Query Frame = 1 Query: 181 RQLISMGFKVVVLEGRERPGGRVKTRKMKCXXXXXXXXXXXSVLTGINGNPLGVLARQLELPLHKVRDICPLYLPNGKAIDADIDSGVEVSFNKLLDRVCKLRHDMIEEFKSVDVPLGVALEAFRNVYKVAEDLQ----ERMLLNWHLANLEYANASLMSNLSMAYWDQDDPY-EMGGDHCFIPGGNERFVRALAEDLPIFYQRTVQSIRYGVDGVMV 819 RQL + G KV VLE ++R GGRV K ++ G NP+ ++ QL + + K+ + C L G+ D +D ++ FN LLD V + R D + DVPLG +E + +Q E +L +HL+NLEYA S + +S WD ++ + + GDH + G + LAE L I + VQSI Y D V V Sbjct: 405 RQLHNFGMKVTVLEAKDRIGGRVWDDKS---FKGVVVGRGPQIVNGCINNPVALMCEQLGISMRKLGERCDLIQEGGRITDPTVDKRMDFHFNALLDVVSEWRKD---KTLLQDVPLGEKIEEIYRAFVKESGIQFSELEGQVLQFHLSNLEYACGSSLHQVSARSWDHNEFFAQFAGDHTLLTPGYSTIIEKLAEGLDIRLKSPVQSIDYTGDEVQV 616
BLAST of CX675169 vs. ExPASy Swiss-Prot
Match: KDM1B_HUMAN (Lysine-specific histone demethylase 1B OS=Homo sapiens GN=KDM1B PE=1 SV=2) HSP 1 Score: 100.138 bits (248), Expect = 1.555e-20 Identity = 72/219 (32.88%), Postives = 103/219 (47.03%), Query Frame = 1 Query: 181 RQLISMGFKVVVLEGRERPGGRVKTRKMKCXXXXXXXXXXXSVLTGINGNPLGVLARQLELPLHKVRDICPLYLPNGKAIDADIDSGVEVSFNKLLDRVCKLRHDMIEEFKSVDVPLGVALEAFRNVYKVAEDLQ----ERMLLNWHLANLEYANASLMSNLSMAYWDQDDPY-EMGGDHCFIPGGNERFVRALAEDLPI-FYQRTVQSIRYGVDGVMV 819 RQL + G KV VLE ++R GGRV K ++ G NP+ ++ QL + +HK + C L G+ D ID ++ FN LLD V + R D + + DVPLG +E + +Q E +L +HL+NLEYA S + +S WD ++ + + GDH + G + LAE L I VQ I Y D V V Sbjct: 399 RQLHNFGIKVTVLEAKDRIGGRVWDDKS---FKGVTVGRGAQIVNGCINNPVALMCEQLGISMHKFGERCDLIQEGGRITDPTIDKRMDFHFNALLDVVSEWRKD---KTQLQDVPLGEKIEEIYKAFIKESGIQFSELEGQVLQFHLSNLEYACGSNLHQVSARSWDHNEFFAQFAGDHTLLTPGYSVIIEKLAEGLDIQLKSPQVQCIDYSGDEVQV 611
BLAST of CX675169 vs. ExPASy Swiss-Prot
Match: KDM1_MOUSE (Lysine-specific histone demethylase 1 OS=Mus musculus GN=Kdm1 PE=1 SV=2) HSP 1 Score: 92.8189 bits (229), Expect = 2.482e-18 Identity = 60/175 (34.29%), Postives = 86/175 (49.14%), Query Frame = 1 Query: 25 LVDSAYDFLLEHGYINFGLAPPIKEVKLGSFGRVERXXXXXXXXXXXXXXXXRQLISMGFKVVVLEGRERPGGRVKTRKMKCXXXXXXXXXXXSVLTGINGNPLGVLARQLELPLHKVRDICPLYLPNGKAIDADIDSGVEVSFNKLLDRVCKLRHDM-IEEFKSVDVPLGVALE 546 LV + +L HG INFG+ IK + + G+V RQL S G V +LE R+R GGRV T + V+TG+ GNP+ V+++Q+ + L K++ CPLY NG+A+ + D VE FN+LL+ L H + + V LG ALE Sbjct: 249 LVHRVHSYLERHGLINFGIYKRIKPLPIKKTGKV-----IIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGGRVATFRK----GNYVADLGAMVVTGLGGNPMAVVSKQVNMELAKIKQKCPLYEANGQAVPKEKDEMVEQEFNRLLEATSYLSHQLDFNVLNNKPVSLGQALE 414 HSP 2 Score: 72.7886 bits (177), Expect = 2.658e-12 Identity = 35/81 (43.21%), Postives = 48/81 (59.26%), Query Frame = 1 Query: 583 QERMLLNWHLANLEYANASLMSNLSMAYWDQDDPYEMGGDHCFIPGGNERFVRALAEDLPIFYQRTVQSIRYGVDGVMVYA 825 ++R +L+WH ANLE+ANA+ +S LS+ +WDQDD +E G H + G ALAE L I V+ +RY G V A Sbjct: 525 RDRQILDWHFANLEFANATPLSTLSLKHWDQDDDFEFTGSHLTVRNGYSCVPVALAEGLDIKLNTAVRQVRYTASGCEVIA 605 The following BLAST results are available for this feature:
BLAST of CX675169 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
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Sequences
The
following sequences are available for this feature:
EST sequence >CX675169 ID=CX675169; Name=CX675169; organism=Citrus sinensis; type=EST; length=825bpback to top |