CK936634
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK936634 vs. ExPASy Swiss-Prot
Match: PSBK_CITSI (Photosystem II reaction center protein K OS=Citrus sinensis GN=psbK PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 1.327e-27 Identity = 60/61 (98.36%), Postives = 60/61 (98.36%), Query Frame = 1 Query: 181 MLNIFSLMYICLNSALYSSSFLFAKLPEAYAFLNPIVDVMPVIPVLFFLLAFVWQTAVSFR 363 MLNIFSLMYICLNSALYSSSFLFAKLPEAYAFLNPIVDVMPVIPVLFFLLAFVWQ AVSFR Sbjct: 1 MLNIFSLMYICLNSALYSSSFLFAKLPEAYAFLNPIVDVMPVIPVLFFLLAFVWQAAVSFR 61
BLAST of CK936634 vs. ExPASy Swiss-Prot
Match: PSBK_JASNU (Photosystem II reaction center protein K OS=Jasminum nudiflorum GN=psbK PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 1.052e-24 Identity = 55/61 (90.16%), Postives = 56/61 (91.80%), Query Frame = 1 Query: 181 MLNIFSLMYICLNSALYSSSFLFAKLPEAYAFLNPIVDVMPVIPVLFFLLAFVWQTAVSFR 363 MLNIFSL+ ICLNSALYSSSF F KLPEAYAFLNPIVDVMPVIPV FFLLAFVWQ AVSFR Sbjct: 1 MLNIFSLISICLNSALYSSSFFFGKLPEAYAFLNPIVDVMPVIPVFFFLLAFVWQAAVSFR 61
BLAST of CK936634 vs. ExPASy Swiss-Prot
Match: PSBK_VITVI (Photosystem II reaction center protein K OS=Vitis vinifera GN=psbK PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 1.794e-24 Identity = 54/61 (88.52%), Postives = 57/61 (93.44%), Query Frame = 1 Query: 181 MLNIFSLMYICLNSALYSSSFLFAKLPEAYAFLNPIVDVMPVIPVLFFLLAFVWQTAVSFR 363 MLNIFSL+ ICLNSALYSS+F FAKLPEAYAFLNPIVDVMPVIP+ FFLLAFVWQ AVSFR Sbjct: 1 MLNIFSLICICLNSALYSSNFFFAKLPEAYAFLNPIVDVMPVIPLFFFLLAFVWQAAVSFR 61
BLAST of CK936634 vs. ExPASy Swiss-Prot
Match: PSBK_MORIN (Photosystem II reaction center protein K OS=Morus indica GN=psbK PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 2.343e-24 Identity = 55/61 (90.16%), Postives = 56/61 (91.80%), Query Frame = 1 Query: 181 MLNIFSLMYICLNSALYSSSFLFAKLPEAYAFLNPIVDVMPVIPVLFFLLAFVWQTAVSFR 363 MLNIFSL+ ICLNS LYSSSF AKLPEAYAFLNPIVDVMPVIPVLFFLLAFVWQ AVSFR Sbjct: 1 MLNIFSLICICLNSVLYSSSFFVAKLPEAYAFLNPIVDVMPVIPVLFFLLAFVWQAAVSFR 61
BLAST of CK936634 vs. ExPASy Swiss-Prot
Match: PSBK_GOSHI (Photosystem II reaction center protein K OS=Gossypium hirsutum GN=psbK PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 3.060e-24 Identity = 54/61 (88.52%), Postives = 57/61 (93.44%), Query Frame = 1 Query: 181 MLNIFSLMYICLNSALYSSSFLFAKLPEAYAFLNPIVDVMPVIPVLFFLLAFVWQTAVSFR 363 MLNIF+L+ IC NSAL+SSSFLFAKLPEAYAFLNPIVD MPVIPVLFFLLAFVWQ AVSFR Sbjct: 1 MLNIFNLICICFNSALFSSSFLFAKLPEAYAFLNPIVDFMPVIPVLFFLLAFVWQAAVSFR 61
BLAST of CK936634 vs. ExPASy Swiss-Prot
Match: PSBK_GOSBA (Photosystem II reaction center protein K OS=Gossypium barbadense GN=psbK PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 3.060e-24 Identity = 54/61 (88.52%), Postives = 57/61 (93.44%), Query Frame = 1 Query: 181 MLNIFSLMYICLNSALYSSSFLFAKLPEAYAFLNPIVDVMPVIPVLFFLLAFVWQTAVSFR 363 MLNIF+L+ IC NSAL+SSSFLFAKLPEAYAFLNPIVD MPVIPVLFFLLAFVWQ AVSFR Sbjct: 1 MLNIFNLICICFNSALFSSSFLFAKLPEAYAFLNPIVDFMPVIPVLFFLLAFVWQAAVSFR 61
BLAST of CK936634 vs. ExPASy Swiss-Prot
Match: PSBK_COFAR (Photosystem II reaction center protein K OS=Coffea arabica GN=psbK PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 5.219e-24 Identity = 52/61 (85.25%), Postives = 55/61 (90.16%), Query Frame = 1 Query: 181 MLNIFSLMYICLNSALYSSSFLFAKLPEAYAFLNPIVDVMPVIPVLFFLLAFVWQTAVSFR 363 MLNIFSL++ICLNSALYSS F F KLPEAYAFLNPI+D MPVIPV FFLLAFVWQ AVSFR Sbjct: 1 MLNIFSLIWICLNSALYSSGFFFGKLPEAYAFLNPIIDFMPVIPVFFFLLAFVWQAAVSFR 61
BLAST of CK936634 vs. ExPASy Swiss-Prot
Match: PSBK_PHAAO (Photosystem II reaction center protein K OS=Phalaenopsis aphrodite subsp. formosana GN=psbK PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 6.816e-24 Identity = 52/61 (85.25%), Postives = 55/61 (90.16%), Query Frame = 1 Query: 181 MLNIFSLMYICLNSALYSSSFLFAKLPEAYAFLNPIVDVMPVIPVLFFLLAFVWQTAVSFR 363 MLNIF L+ ICLNS LYSSSF FAKLPEAYAF NPI+DVMP+IPVLFFLLAFVWQ AVSFR Sbjct: 1 MLNIFCLICICLNSTLYSSSFFFAKLPEAYAFFNPIIDVMPIIPVLFFLLAFVWQAAVSFR 61
BLAST of CK936634 vs. ExPASy Swiss-Prot
Match: PSBK_PANGI (Photosystem II reaction center protein K OS=Panax ginseng GN=psbK PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 8.902e-24 Identity = 53/61 (86.89%), Postives = 56/61 (91.80%), Query Frame = 1 Query: 181 MLNIFSLMYICLNSALYSSSFLFAKLPEAYAFLNPIVDVMPVIPVLFFLLAFVWQTAVSFR 363 MLNIFSL+ ICLNSALYSSS FAKLPEAYAFLNPIVD+MPVIP+ FFLLAFVWQ AVSFR Sbjct: 1 MLNIFSLICICLNSALYSSSLFFAKLPEAYAFLNPIVDLMPVIPLFFFLLAFVWQAAVSFR 61
BLAST of CK936634 vs. ExPASy Swiss-Prot
Match: PSBK_LIRTU (Photosystem II reaction center protein K OS=Liriodendron tulipifera GN=psbK PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 1.163e-23 Identity = 53/61 (86.89%), Postives = 56/61 (91.80%), Query Frame = 1 Query: 181 MLNIFSLMYICLNSALYSSSFLFAKLPEAYAFLNPIVDVMPVIPVLFFLLAFVWQTAVSFR 363 MLNIFSL+ IC+NSAL+SSSF FAKLPEAYAF NPIVDVMPVIPVLFFLLA VWQ AVSFR Sbjct: 1 MLNIFSLICICINSALHSSSFFFAKLPEAYAFFNPIVDVMPVIPVLFFLLALVWQAAVSFR 61 The following BLAST results are available for this feature:
BLAST of CK936634 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 70
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Sequences
The
following sequences are available for this feature:
EST sequence >CK936634 ID=CK936634; Name=CK936634; organism=Citrus sinensis; type=EST; length=442bpback to top |