CK936622
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK936622 vs. ExPASy Swiss-Prot
Match: SINA4_ARATH (E3 ubiquitin-protein ligase SINAT4 OS=Arabidopsis thaliana GN=SINAT4 PE=2 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 1.813e-41 Identity = 74/81 (91.36%), Postives = 77/81 (95.06%), Query Frame = 2 Query: 98 PTAIAPATSVHELLECPGCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAESLELPCKYYHLGC 340 PTA APATSV+ELLECP CT SMYPPIHQCHNGHTLCSTCK RVHNRCPTCRQELGDIRCLALEKVAESLELPCK+Y+LGC Sbjct: 49 PTATAPATSVYELLECPVCTYSMYPPIHQCHNGHTLCSTCKVRVHNRCPTCRQELGDIRCLALEKVAESLELPCKFYNLGC 129
BLAST of CK936622 vs. ExPASy Swiss-Prot
Match: SINA5_ARATH (E3 ubiquitin-protein ligase SINAT5 OS=Arabidopsis thaliana GN=SINAT5 PE=1 SV=2) HSP 1 Score: 167.162 bits (422), Expect = 2.368e-41 Identity = 73/78 (93.59%), Postives = 77/78 (98.72%), Query Frame = 2 Query: 107 IAPATSVHELLECPGCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAESLELPCKYYHLGC 340 I+PATSV+ELLECP CTNSMYPPIHQCHNGHTLCSTCK+RVHNRCPTCRQELGDIRCLALEKVAESLELPCKYY+LGC Sbjct: 34 ISPATSVYELLECPVCTNSMYPPIHQCHNGHTLCSTCKSRVHNRCPTCRQELGDIRCLALEKVAESLELPCKYYNLGC 111
BLAST of CK936622 vs. ExPASy Swiss-Prot
Match: SINA3_ARATH (E3 ubiquitin-protein ligase SINAT3 OS=Arabidopsis thaliana GN=SINAT3 PE=2 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 2.451e-38 Identity = 69/74 (93.24%), Postives = 70/74 (94.59%), Query Frame = 2 Query: 119 TSVHELLECPGCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAESLELPCKYYHLGC 340 TSVHELLECP CTNSMYPPIHQCHNGHTLCSTCK RVHNRCPTCRQELGDIRCLALEKVAESLELPCK+ LGC Sbjct: 55 TSVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKARVHNRCPTCRQELGDIRCLALEKVAESLELPCKHMSLGC 128
BLAST of CK936622 vs. ExPASy Swiss-Prot
Match: SINA1_ARATH (Putative E3 ubiquitin-protein ligase SINAT1 OS=Arabidopsis thaliana GN=SINAT1 PE=2 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 1.701e-31 Identity = 58/75 (77.33%), Postives = 65/75 (86.67%), Query Frame = 2 Query: 116 ATSVHELLECPGCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAESLELPCKYYHLGC 340 + V+ELLECP CTN MYPPIHQC NGHTLCS+CK RV N CPTCR ELG+IRCLALEKVAESLE+PC+Y +LGC Sbjct: 48 SNGVYELLECPVCTNLMYPPIHQCPNGHTLCSSCKLRVQNTCPTCRYELGNIRCLALEKVAESLEVPCRYQNLGC 122
BLAST of CK936622 vs. ExPASy Swiss-Prot
Match: SINA2_ARATH (E3 ubiquitin-protein ligase SINAT2 OS=Arabidopsis thaliana GN=SINAT2 PE=2 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 2.902e-31 Identity = 58/72 (80.56%), Postives = 63/72 (87.50%), Query Frame = 2 Query: 125 VHELLECPGCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAESLELPCKYYHLGC 340 V+ELLECP CTN MYPPIHQC NGHTLCS CK RV N CPTCR ELG+IRCLALEKVAESLE+PC+Y +LGC Sbjct: 54 VYELLECPVCTNLMYPPIHQCPNGHTLCSNCKLRVQNTCPTCRYELGNIRCLALEKVAESLEVPCRYQNLGC 125
BLAST of CK936622 vs. ExPASy Swiss-Prot
Match: SINL6_ARATH (Putative E3 ubiquitin-protein ligase SINA-like 6 OS=Arabidopsis thaliana GN=At5g37870 PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 4.498e-16 Identity = 32/70 (45.71%), Postives = 48/70 (68.57%), Query Frame = 2 Query: 131 ELLECPGCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAESLELPCKYYHLGC 340 ++L+CP C ++ P+ QC NGH CS+C ++ N+CP C +G IRC A+E+V ES+ +PC+Y LGC Sbjct: 41 DILDCPICYQALKIPVFQCGNGHLACSSCCPKLRNKCPACALPVGHIRCRAMERVLESVLVPCRYADLGC 110
BLAST of CK936622 vs. ExPASy Swiss-Prot
Match: SIAH1_DANRE (E3 ubiquitin-protein ligase Siah1 OS=Danio rerio GN=siah1 PE=2 SV=2) HSP 1 Score: 81.6481 bits (200), Expect = 1.309e-15 Identity = 38/77 (49.35%), Postives = 49/77 (63.64%), Query Frame = 2 Query: 110 APATSVHELLECPGCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAESLELPCKYYHLGC 340 A + + L ECP C + + PPI QC +GH +CS C+ ++ CPTCR LG IR LA+EKVA S+ PCKY GC Sbjct: 30 ASNSDLASLFECPVCFDYVLPPILQCQSGHLVCSNCRPKL-TCCPTCRGPLGSIRNLAMEKVANSVLFPCKYASSGC 105
BLAST of CK936622 vs. ExPASy Swiss-Prot
Match: SINAL_DROME (Probable E3 ubiquitin-protein ligase sinah OS=Drosophila melanogaster GN=sinah PE=1 SV=2) HSP 1 Score: 81.2629 bits (199), Expect = 1.709e-15 Identity = 36/69 (52.17%), Postives = 46/69 (66.67%), Query Frame = 2 Query: 134 LLECPGCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAESLELPCKYYHLGC 340 LLECP C + PPI QC GH +CSTC++++ CP CR + +IR LA+EKVA L PCK+ H GC Sbjct: 103 LLECPVCFGYIMPPIMQCPRGHLICSTCRSKL-TICPVCRVFMTNIRSLAMEKVASKLIFPCKHSHFGC 170
BLAST of CK936622 vs. ExPASy Swiss-Prot
Match: SIAH1_RAT (E3 ubiquitin-protein ligase SIAH1 OS=Rattus norvegicus GN=Siah1 PE=1 SV=2) HSP 1 Score: 81.2629 bits (199), Expect = 1.709e-15 Identity = 37/69 (53.62%), Postives = 46/69 (66.67%), Query Frame = 2 Query: 134 LLECPGCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAESLELPCKYYHLGC 340 L ECP C + + PPI QC +GH +CS C+ ++ CPTCR LG IR LA+EKVA S+ PCKY GC Sbjct: 38 LFECPVCFDYVLPPILQCQSGHLVCSNCRPKL-TCCPTCRGPLGSIRNLAMEKVANSVLFPCKYASSGC 105
BLAST of CK936622 vs. ExPASy Swiss-Prot
Match: SIAH1_HUMAN (E3 ubiquitin-protein ligase SIAH1 OS=Homo sapiens GN=SIAH1 PE=1 SV=2) HSP 1 Score: 81.2629 bits (199), Expect = 1.709e-15 Identity = 37/69 (53.62%), Postives = 46/69 (66.67%), Query Frame = 2 Query: 134 LLECPGCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAESLELPCKYYHLGC 340 L ECP C + + PPI QC +GH +CS C+ ++ CPTCR LG IR LA+EKVA S+ PCKY GC Sbjct: 38 LFECPVCFDYVLPPILQCQSGHLVCSNCRPKL-TCCPTCRGPLGSIRNLAMEKVANSVLFPCKYASSGC 105 The following BLAST results are available for this feature:
BLAST of CK936622 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 32
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Sequences
The
following sequences are available for this feature:
EST sequence >CK936622 ID=CK936622; Name=CK936622; organism=Citrus sinensis; type=EST; length=342bpback to top |