CK936613

Overview
NameCK936613
Unique NameCK936613
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length593
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7943 contig Csv1_Contig7943:545..1137. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK936613 vs. ExPASy Swiss-Prot
Match: SDR1_ARATH ((+)-neomenthol dehydrogenase OS=Arabidopsis thaliana GN=SDR1 PE=1 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.180e-38
Identity = 75/125 (60.00%), Postives = 99/125 (79.20%), Query Frame = 1
Query:   52 VTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANTAAYILSKAAMNAYTRILAKKYPNFCINCVCPGYVKTEMTYNAGRLTVEEGAESPVWLALL-HKGGPSGLFFSRKEETLF 423
            V +EWAKG+ SDAENLTEER+D+V++Q LND+KEG+ + K W    +AY++SKA++N YTR+LAKK+P F +N VCPG+VKT+M +  G L+VEEGA SPV LALL H+  PSG FFSRK+ + F
Sbjct:  172 VLNEWAKGILSDAENLTEERIDQVINQLLNDFKEGTVKEKNWAKFMSAYVVSKASLNGYTRVLAKKHPEFRVNAVCPGFVKTDMNFKTGVLSVEEGASSPVRLALLPHQETPSGCFFSRKQVSEF 296          
BLAST of CK936613 vs. ExPASy Swiss-Prot
Match: SDR2_ARATH (Short-chain dehydrogenase/reductase 2 OS=Arabidopsis thaliana GN=SDR2 PE=1 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 3.214e-36
Identity = 73/125 (58.40%), Postives = 95/125 (76.00%), Query Frame = 1
Query:   52 VTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANTAAYILSKAAMNAYTRILAKKYPNFCINCVCPGYVKTEMTYNAGRLTVEEGAESPVWLALL-HKGGPSGLFFSRKEETLF 423
            + +EWAKG+ SDAENLTE R+D+V++Q LND KE + +TK W    +AY++SKA +NAYTRILAKK+P   +N VCPG+VKT+M +  G L+VEEGA SPV LALL H+  PSG FF RK+ + F
Sbjct:  172 LVNEWAKGILSDAENLTEVRIDQVINQLLNDLKEDTAKTKYWAKVMSAYVVSKAGLNAYTRILAKKHPEIRVNSVCPGFVKTDMNFKTGILSVEEGASSPVRLALLPHQESPSGCFFDRKQVSEF 296          
BLAST of CK936613 vs. ExPASy Swiss-Prot
Match: MNR1_CAPAN ((+)-neomenthol dehydrogenase OS=Capsicum annuum GN=MNR1 PE=1 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.034e-34
Identity = 72/122 (59.02%), Postives = 91/122 (74.59%), Query Frame = 1
Query:   58 HEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANTAAYILSKAAMNAYTRILAKKYPNFCINCVCPGYVKTEMTYNAGRLTVEEGAESPVWLALLHKGGPSGLFFSRKEETLF 423
            ++WA  V  DA++LTEE+VD+V++++L D+ E S E+KGWP+   AY +SKA++ AYTR+LA KYPNF IN VCPGY KT++  N G LT  EGAES V LALL   GPSGLFF RKE T F
Sbjct:  193 NKWAIEVLRDADSLTEEKVDQVVNEFLKDFTEKSTESKGWPSYFTAYKVSKASLIAYTRVLATKYPNFRINSVCPGYCKTDVNANTGSLTAGEGAESLVNLALLPNDGPSGLFFYRKEVTFF 314          
BLAST of CK936613 vs. ExPASy Swiss-Prot
Match: SALR_PAPBR (Salutaridine reductase OS=Papaver bracteatum GN=SALR PE=1 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 4.066e-31
Identity = 65/126 (51.59%), Postives = 83/126 (65.87%), Query Frame = 1
Query:   46 QYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANTAAYILSKAAMNAYTRILAKKYPNFCINCVCPGYVKTEMTYNAGRLTVEEGAESPVWLALLHKGGPSGLFFSRKEETLF 423
            +YV++E A  +  D + LTEER+D V++  L D+KE   ET GWP+  AAY  SKA +NAYTR+LAKK P F +NCVCPG VKTEM Y  G  T +EGA+  V +AL    GPSG F+   E + F
Sbjct:  186 KYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKACLNAYTRVLAKKIPKFQVNCVCPGLVKTEMNYGIGNYTADEGAKHVVRIALFPDDGPSGFFYDCSELSAF 311          
BLAST of CK936613 vs. ExPASy Swiss-Prot
Match: CBR1_RAT (Carbonyl reductase [NADPH] 1 OS=Rattus norvegicus GN=Cbr1 PE=1 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 3.237e-12
Identity = 41/116 (35.34%), Postives = 66/116 (56.90%), Query Frame = 1
Query:   88 AENLTEERVDEVLSQYLNDYKEGSPETKGWPANTAAYILSKAAMNAYTRILAKKY------PNFCINCVCPGYVKTEMTYNAGRLTVEEGAESPVWLALLHKG--GPSGLFFSRKE 411
            +E +TEE +  ++++++ D K+G    +GWP   +AY ++K  +   +RI A+K           +N  CPG+V+T+M       + EEGAE+PV+LALL  G  GP G F   K+
Sbjct:  160 SETITEEELVGLMNKFIEDAKKGVHAKEGWP--NSAYGVTKIGVTVLSRIYARKLNEERREDKILLNACCPGWVRTDMAGPKATKSPEEGAETPVYLALLPPGAEGPHGQFVQDKK 273          
BLAST of CK936613 vs. ExPASy Swiss-Prot
Match: CBR1_PONAB (Carbonyl reductase [NADPH] 1 OS=Pongo abelii GN=CBR1 PE=2 SV=3)

HSP 1 Score: 71.2478 bits (173), Expect = 4.227e-12
Identity = 41/115 (35.65%), Postives = 67/115 (58.26%), Query Frame = 1
Query:   88 AENLTEERVDEVLSQYLNDYKEGSPETKGWPANTAAYILSKAAMNAYTRILAKKYPN------FCINCVCPGYVKTEMTYNAGRLTVEEGAESPVWLALL--HKGGPSGLFFSRK 408
            +E +TEE +  ++++++ D K+G  + +GWP++  AY ++K  +   +RI A+K           +N  CPG+V+T+M       + EEGAE+PV+LALL     GP G F S K
Sbjct:  160 SETITEEELVGLMNKFVEDTKKGVHQKEGWPSS--AYGVTKIGVTVLSRIHARKLSEQRKGDRILLNACCPGWVRTDMAGPKATKSPEEGAETPVYLALLPPDAEGPHGQFVSEK 272          
BLAST of CK936613 vs. ExPASy Swiss-Prot
Match: CBR1_HUMAN (Carbonyl reductase [NADPH] 1 OS=Homo sapiens GN=CBR1 PE=1 SV=3)

HSP 1 Score: 71.2478 bits (173), Expect = 4.227e-12
Identity = 41/115 (35.65%), Postives = 67/115 (58.26%), Query Frame = 1
Query:   88 AENLTEERVDEVLSQYLNDYKEGSPETKGWPANTAAYILSKAAMNAYTRILAKKYPN------FCINCVCPGYVKTEMTYNAGRLTVEEGAESPVWLALL--HKGGPSGLFFSRK 408
            +E +TEE +  ++++++ D K+G  + +GWP++  AY ++K  +   +RI A+K           +N  CPG+V+T+M       + EEGAE+PV+LALL     GP G F S K
Sbjct:  160 SETITEEELVGLMNKFVEDTKKGVHQKEGWPSS--AYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGPKATKSPEEGAETPVYLALLPPDAEGPHGQFVSEK 272          
BLAST of CK936613 vs. ExPASy Swiss-Prot
Match: CBR1_MOUSE (Carbonyl reductase [NADPH] 1 OS=Mus musculus GN=Cbr1 PE=1 SV=3)

HSP 1 Score: 70.4774 bits (171), Expect = 7.210e-12
Identity = 41/116 (35.34%), Postives = 66/116 (56.90%), Query Frame = 1
Query:   88 AENLTEERVDEVLSQYLNDYKEGSPETKGWPANTAAYILSKAAMNAYTRILAKKY------PNFCINCVCPGYVKTEMTYNAGRLTVEEGAESPVWLALL--HKGGPSGLFFSRKE 411
            +E +TEE +  ++++++ D K+G    +GWP   +AY ++K  +   +RILA+K           +N  CPG+V+T+M       + EEGAE+PV+LALL     GP G F   K+
Sbjct:  160 SETITEEELVGLMNKFVEDTKKGVHAEEGWP--NSAYGVTKIGVTVLSRILARKLNEQRRGDKILLNACCPGWVRTDMAGPKATKSPEEGAETPVYLALLPPDAEGPHGQFVQDKK 273          
BLAST of CK936613 vs. ExPASy Swiss-Prot
Match: CBR1_MACFA (Carbonyl reductase [NADPH] 1 OS=Macaca fascicularis GN=CBR1 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.606e-11
Identity = 40/115 (34.78%), Postives = 66/115 (57.39%), Query Frame = 1
Query:   88 AENLTEERVDEVLSQYLNDYKEGSPETKGWPANTAAYILSKAAMNAYTRILAKKYPN------FCINCVCPGYVKTEMTYNAGRLTVEEGAESPVWLAL--LHKGGPSGLFFSRK 408
            +E +TEE +  +++++  D K+G  + +GWP++  AY ++K  +   +RI A+K           +N  CPG+V+T+M   +   + EEGAE+PV+LAL  L   GP G F   K
Sbjct:  160 SETITEEELVGLMNKFAEDTKKGVHQKEGWPSS--AYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGPSATKSPEEGAETPVYLALLPLDAEGPHGQFVMEK 272          
BLAST of CK936613 vs. ExPASy Swiss-Prot
Match: CBR1_BOVIN (Carbonyl reductase [NADPH] 1 OS=Bos taurus GN=CBR1 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 2.740e-11
Identity = 41/115 (35.65%), Postives = 63/115 (54.78%), Query Frame = 1
Query:   88 AENLTEERVDEVLSQYLNDYKEGSPETKGWPANTAAYILSKAAMNAYTRILAKKYPN------FCINCVCPGYVKTEMTYNAGRLTVEEGAESPVWLALLHKG--GPSGLFFSRK 408
            +E +TEE +  ++++++ D K G    +GWP    AY ++K  +   +RI A+K           +N  CPG+V+T+M       + EEGAE+PV+LALL     GP G F S K
Sbjct:  160 SETITEEELVGLMNKFVEDTKNGVHRKEGWP--DTAYGVTKIGVTVLSRIHARKLSEQRGGDKILLNACCPGWVRTDMGGPKASKSPEEGAETPVYLALLPSDAEGPHGEFISEK 272          
The following BLAST results are available for this feature:
BLAST of CK936613 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
SDR1_ARATH1.180e-3860.00(+)-neomenthol dehydrogenase OS=Arabidopsis thalia... [more]
SDR2_ARATH3.214e-3658.40Short-chain dehydrogenase/reductase 2 OS=Arabidops... [more]
MNR1_CAPAN1.034e-3459.02(+)-neomenthol dehydrogenase OS=Capsicum annuum GN... [more]
SALR_PAPBR4.066e-3151.59Salutaridine reductase OS=Papaver bracteatum GN=SA... [more]
CBR1_RAT3.237e-1235.34Carbonyl reductase [NADPH] 1 OS=Rattus norvegicus ... [more]
CBR1_PONAB4.227e-1235.65Carbonyl reductase [NADPH] 1 OS=Pongo abelii GN=CB... [more]
CBR1_HUMAN4.227e-1235.65Carbonyl reductase [NADPH] 1 OS=Homo sapiens GN=CB... [more]
CBR1_MOUSE7.210e-1235.34Carbonyl reductase [NADPH] 1 OS=Mus musculus GN=Cb... [more]
CBR1_MACFA1.606e-1134.78Carbonyl reductase [NADPH] 1 OS=Macaca fasciculari... [more]
CBR1_BOVIN2.740e-1135.65Carbonyl reductase [NADPH] 1 OS=Bos taurus GN=CBR1... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004520_C05 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0001_IIIF_C05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK936613 ID=CK936613; Name=CK936613; organism=Citrus sinensis; type=EST; length=593bp
GGGGAATCATGAAGGTTGAAATTTCTGTTTCTCATCATTTTCTTTCAGTA
TGTAACACATGAATGGGCCAAAGGAGTGTTTAGTGATGCTGAGAACCTCA
CAGAAGAAAGAGTGGATGAGGTATTGAGCCAGTATCTAAATGATTACAAA
GAGGGTTCACCGGAAACTAAAGGATGGCCTGCTAATACAGCTGCTTACAT
ACTATCAAAAGCAGCTATGAATGCCTACACAAGGATCCTGGCCAAGAAGT
ACCCAAATTTTTGCATCAATTGCGTTTGCCCTGGCTATGTTAAAACAGAA
ATGACCTACAACGCTGGTAGATTAACTGTAGAAGAAGGTGCCGAATCTCC
AGTTTGGTTGGCTCTGCTGCACAAGGGCGGTCCTTCTGGTCTATTCTTTT
CACGGAAAGAAGAGACCCTTTTTTGATTGAAAATGATTCATCGATCACTG
CATACCGATATTGAATTTACATATCTTTTGATGTTGAATTTGAATAAGTG
AAATATCATCTTATGTAATTGAACCCTTTGTTAAAAGTAATAGATGAATG
GACTCATCCAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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