CK936607
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK936607 vs. ExPASy Swiss-Prot
Match: EF1B_ORYSJ (Elongation factor 1-beta OS=Oryza sativa subsp. japonica GN=Os07g0662500 PE=1 SV=3) HSP 1 Score: 158.303 bits (399), Expect = 1.942e-38 Identity = 78/87 (89.66%), Postives = 82/87 (94.25%), Query Frame = 1 Query: 85 VLLDVKPWDDETDMKKLEEAVRSVEMPGLFWGASKLVLVGYGIKKLQIMITIVDDLVSVDSLIEEHLTAEPCNEYIQSCDIVAFNKI 345 VLLDVKPWDDETDMKKLEEAVRSV+M GL WGASKLV VGYGIKKLQIM+TIVDDLVSVDSLIEEHLT EP NE++QSCDIVAFNKI Sbjct: 138 VLLDVKPWDDETDMKKLEEAVRSVQMEGLTWGASKLVPVGYGIKKLQIMLTIVDDLVSVDSLIEEHLTEEPINEFVQSCDIVAFNKI 224
BLAST of CK936607 vs. ExPASy Swiss-Prot
Match: EF1D_PIMBR (Elongation factor 1-delta OS=Pimpinella brachycarpa PE=2 SV=3) HSP 1 Score: 155.606 bits (392), Expect = 1.259e-37 Identity = 75/87 (86.21%), Postives = 81/87 (93.10%), Query Frame = 1 Query: 85 VLLDVKPWDDETDMKKLEEAVRSVEMPGLFWGASKLVLVGYGIKKLQIMITIVDDLVSVDSLIEEHLTAEPCNEYIQSCDIVAFNKI 345 VLLDVKPWDDETDM KLEEAVRS++M GL WGASKLV VGYGIKKLQIM+TIVDDLVSVD L+E++LTAEP NEYIQSCDIVAFNKI Sbjct: 140 VLLDVKPWDDETDMTKLEEAVRSIKMDGLLWGASKLVAVGYGIKKLQIMLTIVDDLVSVDDLVEDYLTAEPANEYIQSCDIVAFNKI 226
BLAST of CK936607 vs. ExPASy Swiss-Prot
Match: EF1B2_ARATH (Elongation factor 1-beta 2 OS=Arabidopsis thaliana GN=At5g19510 PE=1 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 3.663e-37 Identity = 76/87 (87.36%), Postives = 80/87 (91.95%), Query Frame = 1 Query: 85 VLLDVKPWDDETDMKKLEEAVRSVEMPGLFWGASKLVLVGYGIKKLQIMITIVDDLVSVDSLIEEHLTAEPCNEYIQSCDIVAFNKI 345 VL+DVKPWDDETDMKKLEEAVR VEMPGLFWGASKLV VGYGIKKL IM TIVDDLVS D+LIE+ LT+EP NEYIQSCDIVAFNKI Sbjct: 138 VLMDVKPWDDETDMKKLEEAVRGVEMPGLFWGASKLVPVGYGIKKLTIMFTIVDDLVSPDNLIEDFLTSEPNNEYIQSCDIVAFNKI 224
BLAST of CK936607 vs. ExPASy Swiss-Prot
Match: EF1D2_ARATH (Elongation factor 1-delta 2 OS=Arabidopsis thaliana GN=At2g18110 PE=2 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 6.248e-37 Identity = 72/87 (82.76%), Postives = 80/87 (91.95%), Query Frame = 1 Query: 85 VLLDVKPWDDETDMKKLEEAVRSVEMPGLFWGASKLVLVGYGIKKLQIMITIVDDLVSVDSLIEEHLTAEPCNEYIQSCDIVAFNKI 345 VL+D+KPWDDETDMKKLEEAVRS++M GLFWGASKLV VGYGIKKL IM TIVDDLVS+D++IEE LT EP NEY+QSCDIVAFNKI Sbjct: 145 VLMDIKPWDDETDMKKLEEAVRSIQMEGLFWGASKLVPVGYGIKKLHIMCTIVDDLVSIDTMIEEQLTVEPINEYVQSCDIVAFNKI 231
BLAST of CK936607 vs. ExPASy Swiss-Prot
Match: EF1D1_ARATH (Elongation factor 1-delta 1 OS=Arabidopsis thaliana GN=At1g30230 PE=2 SV=2) HSP 1 Score: 152.91 bits (385), Expect = 8.160e-37 Identity = 71/87 (81.61%), Postives = 81/87 (93.10%), Query Frame = 1 Query: 85 VLLDVKPWDDETDMKKLEEAVRSVEMPGLFWGASKLVLVGYGIKKLQIMITIVDDLVSVDSLIEEHLTAEPCNEYIQSCDIVAFNKI 345 VL+D+KPWDDETDMKKLEEAV+S++M GLFWGASKLV VGYGIKKLQI+ TIVDDLVS+D++IEE LT EP NEY+QSCDIVAFNKI Sbjct: 145 VLIDIKPWDDETDMKKLEEAVKSIQMEGLFWGASKLVPVGYGIKKLQILCTIVDDLVSIDTMIEEQLTVEPINEYVQSCDIVAFNKI 231
BLAST of CK936607 vs. ExPASy Swiss-Prot
Match: EF1B1_ARATH (Elongation factor 1-beta 1 OS=Arabidopsis thaliana GN=At5g12110 PE=2 SV=2) HSP 1 Score: 152.91 bits (385), Expect = 8.160e-37 Identity = 76/87 (87.36%), Postives = 82/87 (94.25%), Query Frame = 1 Query: 85 VLLDVKPWDDETDMKKLEEAVRSVEMPGLFWGASKLVLVGYGIKKLQIMITIVDDLVSVDSLIEEHLTAEPCNEYIQSCDIVAFNKI 345 VLL+VKPWDDETDMKKLEEAVRSV+MPGL WGASKLV VGYGIKKL IM+TIVDDLVSVD+LIE+HLT+EP NEYIQS DIVAFNKI Sbjct: 142 VLLEVKPWDDETDMKKLEEAVRSVQMPGLTWGASKLVPVGYGIKKLTIMMTIVDDLVSVDNLIEDHLTSEPNNEYIQSVDIVAFNKI 228
BLAST of CK936607 vs. ExPASy Swiss-Prot
Match: EF1D1_ORYSJ (Elongation factor 1-delta 1 OS=Oryza sativa subsp. japonica GN=Os07g0614500 PE=2 SV=3) HSP 1 Score: 149.828 bits (377), Expect = 6.908e-36 Identity = 74/87 (85.06%), Postives = 79/87 (90.80%), Query Frame = 1 Query: 85 VLLDVKPWDDETDMKKLEEAVRSVEMPGLFWGASKLVLVGYGIKKLQIMITIVDDLVSVDSLIEEHLTAEPCNEYIQSCDIVAFNKI 345 VLLDVKPWDDETDM KLEEAVR+V+M GL WGASKLV VGYGIKKLQIM+TIVDDLVSVDSLIE++ EP NEYIQSCDIVAFNKI Sbjct: 143 VLLDVKPWDDETDMTKLEEAVRNVKMEGLLWGASKLVPVGYGIKKLQIMMTIVDDLVSVDSLIEDYFYTEPANEYIQSCDIVAFNKI 229
BLAST of CK936607 vs. ExPASy Swiss-Prot
Match: EF1D2_ORYSJ (Elongation factor 1-delta 2 OS=Oryza sativa subsp. japonica GN=Os03g0406200 PE=2 SV=3) HSP 1 Score: 148.288 bits (373), Expect = 2.010e-35 Identity = 73/87 (83.91%), Postives = 79/87 (90.80%), Query Frame = 1 Query: 85 VLLDVKPWDDETDMKKLEEAVRSVEMPGLFWGASKLVLVGYGIKKLQIMITIVDDLVSVDSLIEEHLTAEPCNEYIQSCDIVAFNKI 345 VLLDVKPWDDETDM KLEEAVR+V+M GL WGASKLV VGYGIKKLQIM+TIVDDLVSVDSLIE++ EP NE+IQSCDIVAFNKI Sbjct: 140 VLLDVKPWDDETDMAKLEEAVRNVKMEGLLWGASKLVPVGYGIKKLQIMMTIVDDLVSVDSLIEDYFYTEPANEFIQSCDIVAFNKI 226
BLAST of CK936607 vs. ExPASy Swiss-Prot
Match: EF1D_BETVU (Elongation factor 1-delta OS=Beta vulgaris PE=2 SV=3) HSP 1 Score: 145.976 bits (367), Expect = 9.974e-35 Identity = 73/87 (83.91%), Postives = 79/87 (90.80%), Query Frame = 1 Query: 85 VLLDVKPWDDETDMKKLEEAVRSVEMPGLFWGASKLVLVGYGIKKLQIMITIVDDLVSVDSLIEEHLTAEPCNEYIQSCDIVAFNKI 345 VLLDVKPWDDETDMKKLEEAVRSV+ GL GASKLV VGYGIKKL IM+TIVDDLVSVD+LIE++LT EP NEY+QSCDIVAFNKI Sbjct: 145 VLLDVKPWDDETDMKKLEEAVRSVQQEGLTLGASKLVPVGYGIKKLTIMMTIVDDLVSVDNLIEDYLTVEPINEYVQSCDIVAFNKI 231
BLAST of CK936607 vs. ExPASy Swiss-Prot
Match: EF1B_WHEAT (Elongation factor 1-beta OS=Triticum aestivum PE=1 SV=2) HSP 1 Score: 134.42 bits (337), Expect = 3.003e-31 Identity = 67/87 (77.01%), Postives = 74/87 (85.06%), Query Frame = 1 Query: 85 VLLDVKPWDDETDMKKLEEAVRSVEMPGLFWGASKLVLVGYGIKKLQIMITIVDDLVSVDSLIEEHLTAEPCNEYIQSCDIVAFNKI 345 VL+D+KPWDDETDMKKLEEAVRSV+M GL WGASKL+ VGYGIKKLQIM+TI+DDL S IEE L P NEY+QSCDIVAFNKI Sbjct: 132 VLMDIKPWDDETDMKKLEEAVRSVQMEGLTWGASKLMPVGYGIKKLQIMLTIIDDLASTP--IEEVLCEAPINEYVQSCDIVAFNKI 216 The following BLAST results are available for this feature:
BLAST of CK936607 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 38
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Sequences
The
following sequences are available for this feature:
EST sequence >CK936607 ID=CK936607; Name=CK936607; organism=Citrus sinensis; type=EST; length=517bpback to top |