CK936592

Overview
NameCK936592
Unique NameCK936592
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length402
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK936592 vs. ExPASy Swiss-Prot
Match: COQ2_CAEEL (Para-hydroxybenzoate--polyprenyltransferase, mitochondrial OS=Caenorhabditis elegans GN=coq-2 PE=2 SV=2)

HSP 1 Score: 121.324 bits (303), Expect = 1.522e-27
Identity = 60/134 (44.78%), Postives = 70/134 (52.24%), Query Frame = 1
Query:    1 GTWLLAWPCMWTITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRIPGASSLLXVFSYPLMKRFTFWPQAYLGLTFHWGAL 402
            GTWLL WPC W+I MA P G  P   M+              C +NDL D+D D  VERT+LRP+A G LT                      N +S   GASS+  V  YPL KRFT+WPQ  LGLTF+WGAL
Sbjct:   76 GTWLLYWPCTWSIAMATPAGQLPSIYMLSLFGAGAFLMRSAGCVINDLWDKDFDKKVERTKLRPLACGSLTEKQAIGLLAGLLSSSLAILLQLNWYSVAVGASSMALVVGYPLAKRFTYWPQFVLGLTFNWGAL 209          
BLAST of CK936592 vs. ExPASy Swiss-Prot
Match: COQ2_RAT (Para-hydroxybenzoate--polyprenyltransferase, mitochondrial OS=Rattus norvegicus GN=Coq2 PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 3.390e-27
Identity = 62/134 (46.27%), Postives = 75/134 (55.97%), Query Frame = 1
Query:    1 GTWLLAWPCMWTITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRIPGASSLLXVFSYPLMKRFTFWPQAYLGLTFHWGAL 402
            GTWLL  PC W+I +AA PG FPD+ M+              CT+ND+ DRD D  VERT  RPIA+G ++                      N +S   GA+SLL V +YPLMKR TFWPQ  LGLTF+WGAL
Sbjct:   85 GTWLLYLPCTWSIGLAADPGCFPDWYMLSLFGTGAILMRGAGCTINDMWDRDFDKKVERTANRPIAAGDISAFQSFVFLGAQLTLALGVLLHLNYYSIAMGAASLLLVVTYPLMKRVTFWPQLALGLTFNWGAL 218          
BLAST of CK936592 vs. ExPASy Swiss-Prot
Match: COQ2_MOUSE (Para-hydroxybenzoate--polyprenyltransferase, mitochondrial OS=Mus musculus GN=Coq2 PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 1.288e-26
Identity = 61/134 (45.52%), Postives = 74/134 (55.22%), Query Frame = 1
Query:    1 GTWLLAWPCMWTITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRIPGASSLLXVFSYPLMKRFTFWPQAYLGLTFHWGAL 402
            GTWLL  PC W+I +AA PG FPD+ M+              CT+ND+ DRD D  V RT  RPIA+G ++                      N +S   GA+SLL V +YPLMKR TFWPQ  LGLTF+WGAL
Sbjct:   85 GTWLLYLPCTWSIGLAADPGCFPDWYMLSLFGTGAILMRGAGCTINDMWDRDFDKKVTRTANRPIAAGDISTFQSFVFLGGQLTLALGVLLCLNYYSIAMGAASLLLVVTYPLMKRITFWPQLALGLTFNWGAL 218          
BLAST of CK936592 vs. ExPASy Swiss-Prot
Match: COQ2_DROME (Para-hydroxybenzoate--polyprenyltransferase, mitochondrial OS=Drosophila melanogaster GN=Coq2 PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 8.350e-26
Identity = 59/134 (44.03%), Postives = 75/134 (55.97%), Query Frame = 1
Query:    1 GTWLLAWPCMWTITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRIPGASSLLXVFSYPLMKRFTFWPQAYLGLTFHWGAL 402
            GT+LL WPC W+I ++A  G +PD  M+              CT+NDL D+DID  VERTRLRP+ASG ++                      N  S + GASSL  V +YPLMKR T+WPQ  LG+ F+WGAL
Sbjct:   91 GTYLLFWPCAWSIALSADAGCWPDLTMLGLFGTGALIMRGAGCTINDLWDKDIDAKVERTRLRPLASGQISQFDAIVFLSAQLSLGLLVLVQLNWQSILLGASSLGLVITYPLMKRVTYWPQLVLGMAFNWGAL 224          
BLAST of CK936592 vs. ExPASy Swiss-Prot
Match: COQ2_AEDAE (Para-hydroxybenzoate--polyprenyltransferase, mitochondrial OS=Aedes aegypti GN=coq2 PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 1.860e-25
Identity = 58/134 (43.28%), Postives = 72/134 (53.73%), Query Frame = 1
Query:    1 GTWLLAWPCMWTITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRIPGASSLLXVFSYPLMKRFTFWPQAYLGLTFHWGAL 402
            G+WLL WPC W+I ++AP G +PD   +              CT+ND+ DRDID  V RTR RP+ +G LT                      N +S + GASSL  V  YPLMKR T WPQ  LG+TF+WGAL
Sbjct:  130 GSWLLFWPCGWSIALSAPAGCWPDLWTLTLFGAGAFIMRGAGCTINDMWDRDIDGKVARTRNRPLVAGELTSADAWFFLGAQLGVGLLILLELNWYSIVLGASSLGLVIIYPLMKRITHWPQLVLGMTFNWGAL 263          
BLAST of CK936592 vs. ExPASy Swiss-Prot
Match: COQ2_BOVIN (Para-hydroxybenzoate--polyprenyltransferase, mitochondrial OS=Bos taurus GN=COQ2 PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 2.430e-25
Identity = 59/134 (44.03%), Postives = 73/134 (54.48%), Query Frame = 1
Query:    1 GTWLLAWPCMWTITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRIPGASSLLXVFSYPLMKRFTFWPQAYLGLTFHWGAL 402
            GTWLL  PC W+I +AA PG  PD+ M+              CT+ND+ DRD D  V RT  RPIA+G ++                      N +S   GA+SLL V +YPLMKR T+WPQ  LGLTF+WGAL
Sbjct:   85 GTWLLYLPCTWSIGLAADPGCLPDWYMLSLFGTGAVLMRGAGCTINDMWDRDYDKKVTRTASRPIAAGDISTFRSFVFLGGQLTLALGVLLCLNYYSIALGAASLLLVTTYPLMKRITYWPQLALGLTFNWGAL 218          
BLAST of CK936592 vs. ExPASy Swiss-Prot
Match: COQ2_DROPS (Para-hydroxybenzoate--polyprenyltransferase, mitochondrial OS=Drosophila pseudoobscura pseudoobscura GN=coq2 PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 3.173e-25
Identity = 58/134 (43.28%), Postives = 74/134 (55.22%), Query Frame = 1
Query:    1 GTWLLAWPCMWTITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRIPGASSLLXVFSYPLMKRFTFWPQAYLGLTFHWGAL 402
            GT+LL WPC W+I ++A  G +PD  M+              CT+NDL D+DID  VERTR RP+ASG ++                      N  S + GASSL  V +YPLMKR T+WPQ  LG+ F+WGAL
Sbjct:   97 GTYLLFWPCAWSIALSADAGCWPDLTMLGLFGTGALIMRGAGCTINDLWDKDIDAKVERTRTRPLASGQISQFDAIVFLSAQLSLGLLVLVQLNWQSILLGASSLGLVITYPLMKRVTYWPQLVLGMAFNWGAL 230          
BLAST of CK936592 vs. ExPASy Swiss-Prot
Match: COQ2_HUMAN (Para-hydroxybenzoate--polyprenyltransferase, mitochondrial OS=Homo sapiens GN=COQ2 PE=1 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 4.144e-25
Identity = 58/134 (43.28%), Postives = 73/134 (54.48%), Query Frame = 1
Query:    1 GTWLLAWPCMWTITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRIPGASSLLXVFSYPLMKRFTFWPQAYLGLTFHWGAL 402
            GTWLL  PC W+I +AA PG FPD+ M+              CT+ND+ D+D D  V RT  RPIA+G ++                      N +S   GA SLL V +YPLMKR ++WPQ  LGLTF+WGAL
Sbjct:   85 GTWLLYLPCTWSIGLAAEPGCFPDWYMLSLFGTGAILMRGAGCTINDMWDQDYDKKVTRTANRPIAAGDISTFQSFVFLGGQLTLALGVLLCLNYYSIALGAGSLLLVITYPLMKRISYWPQLALGLTFNWGAL 218          
BLAST of CK936592 vs. ExPASy Swiss-Prot
Match: COQ2_DICDI (Para-hydroxybenzoate--polyprenyltransferase, mitochondrial OS=Dictyostelium discoideum GN=coq2 PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 3.284e-22
Identity = 57/135 (42.22%), Postives = 69/135 (51.11%), Query Frame = 1
Query:    1 GTWLLAWPCMWTITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRIP-GASSLLXVFSYPLMKRFTFWPQAYLGLTFHWGAL 402
            G WLL +PC W+I++AAP G FPD K M              C +ND+ D   D+ VERT+ RPIAS  LT                       N+  I   ASSL  V  YP MKRFT++PQ  LGL F+WGAL
Sbjct:  182 GVWLLLYPCCWSISLAAPAGSFPDLKTMLVFGIGAYVMRSAGCVINDMADYKFDSKVERTKTRPIASKQLTHKQSLIFLGGQLLASFGLILSSLNYYTIALCASSLPIVVLYPFMKRFTYYPQFVLGLAFNWGAL 316          
BLAST of CK936592 vs. ExPASy Swiss-Prot
Match: UBIA_PSYIN (4-hydroxybenzoate octaprenyltransferase OS=Psychromonas ingrahamii (strain 37) GN=ubiA PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 2.279e-15
Identity = 46/131 (35.11%), Postives = 59/131 (45.04%), Query Frame = 1
Query:    1 GTWLLAWPCMWTITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRIPGASSLLXVFSYPLMKRFTFWPQAYLGLTFHW 393
            GT LL WP +W + +AA    FPD  ++              C +ND  DR+ID  VERT+ RP+ SG  T                      N+ +     + LL  F+YP MKRFT  PQ  LGL F W
Sbjct:   23 GTLLLLWPTLWALWIAAQG--FPDLGVLIVFSAGVFLMRSAGCVINDFADRNIDGFVERTKHRPLPSGRATSTEAIILFFILAIVSFLLVLTQNSLTIQLSFAGLLLAFAYPFMKRFTQLPQLVLGLAFSW 151          
The following BLAST results are available for this feature:
BLAST of CK936592 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
COQ2_CAEEL1.522e-2744.78Para-hydroxybenzoate--polyprenyltransferase, mitoc... [more]
COQ2_RAT3.390e-2746.27Para-hydroxybenzoate--polyprenyltransferase, mitoc... [more]
COQ2_MOUSE1.288e-2645.52Para-hydroxybenzoate--polyprenyltransferase, mitoc... [more]
COQ2_DROME8.350e-2644.03Para-hydroxybenzoate--polyprenyltransferase, mitoc... [more]
COQ2_AEDAE1.860e-2543.28Para-hydroxybenzoate--polyprenyltransferase, mitoc... [more]
COQ2_BOVIN2.430e-2544.03Para-hydroxybenzoate--polyprenyltransferase, mitoc... [more]
COQ2_DROPS3.173e-2543.28Para-hydroxybenzoate--polyprenyltransferase, mitoc... [more]
COQ2_HUMAN4.144e-2543.28Para-hydroxybenzoate--polyprenyltransferase, mitoc... [more]
COQ2_DICDI3.284e-2242.22Para-hydroxybenzoate--polyprenyltransferase, mitoc... [more]
UBIA_PSYIN2.279e-1535.114-hydroxybenzoate octaprenyltransferase OS=Psychro... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004520_E09 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0001_IIIF_E09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK936592 ID=CK936592; Name=CK936592; organism=Citrus sinensis; type=EST; length=402bp
GGGACGTGGCTGCTGGCTTGGCCTTGTATGTGGACAATTACAATGGCGGC
GCCACCTGGACACTTTCCGGATTTCAAAATGATGGCGCTCTTTGGCTGTG
GCGCTCTCCTTCTACGCGGGGCCGGGTGTACCGTTAATGACCTCCTTGAT
AGGGATATTGATAATATGGTGGAACGCACAAGGTTAAGGCCCATTGCGAG
TGGTCTTCTAACACCGTTTCAAGGACTTTCTTTTCTTGGGTTTCAATTGC
TTTTAGGTCTTGGGATTCTTCTCCAGTTGAATAATTTTAGCCGCATTCCG
GGGGCTTCATCTTTGCTGGNAGTCTTCTCCTACCCCCTCATGAAGAGGTT
TACTTTTTGGCCTCAAGCCTATCTAGGTTTGACCTTTCACTGGGGAGCCT
TA
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