CK936590
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK936590 vs. ExPASy Swiss-Prot
Match: PSBK_CITSI (Photosystem II reaction center protein K OS=Citrus sinensis GN=psbK PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 5.773e-27 Identity = 60/61 (98.36%), Postives = 60/61 (98.36%), Query Frame = 1 Query: 136 MLNIFSLMYICLNSALYSSSFLFAKLPEAYAFLNPIVDVMLVIPVLFFLLAFVWQAAVSFR 318 MLNIFSLMYICLNSALYSSSFLFAKLPEAYAFLNPIVDVM VIPVLFFLLAFVWQAAVSFR Sbjct: 1 MLNIFSLMYICLNSALYSSSFLFAKLPEAYAFLNPIVDVMPVIPVLFFLLAFVWQAAVSFR 61
BLAST of CK936590 vs. ExPASy Swiss-Prot
Match: PSBK_JASNU (Photosystem II reaction center protein K OS=Jasminum nudiflorum GN=psbK PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 4.574e-24 Identity = 55/61 (90.16%), Postives = 56/61 (91.80%), Query Frame = 1 Query: 136 MLNIFSLMYICLNSALYSSSFLFAKLPEAYAFLNPIVDVMLVIPVLFFLLAFVWQAAVSFR 318 MLNIFSL+ ICLNSALYSSSF F KLPEAYAFLNPIVDVM VIPV FFLLAFVWQAAVSFR Sbjct: 1 MLNIFSLISICLNSALYSSSFFFGKLPEAYAFLNPIVDVMPVIPVFFFLLAFVWQAAVSFR 61
BLAST of CK936590 vs. ExPASy Swiss-Prot
Match: PSBK_VITVI (Photosystem II reaction center protein K OS=Vitis vinifera GN=psbK PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 7.803e-24 Identity = 54/61 (88.52%), Postives = 57/61 (93.44%), Query Frame = 1 Query: 136 MLNIFSLMYICLNSALYSSSFLFAKLPEAYAFLNPIVDVMLVIPVLFFLLAFVWQAAVSFR 318 MLNIFSL+ ICLNSALYSS+F FAKLPEAYAFLNPIVDVM VIP+ FFLLAFVWQAAVSFR Sbjct: 1 MLNIFSLICICLNSALYSSNFFFAKLPEAYAFLNPIVDVMPVIPLFFFLLAFVWQAAVSFR 61
BLAST of CK936590 vs. ExPASy Swiss-Prot
Match: PSBK_MORIN (Photosystem II reaction center protein K OS=Morus indica GN=psbK PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 1.019e-23 Identity = 55/61 (90.16%), Postives = 56/61 (91.80%), Query Frame = 1 Query: 136 MLNIFSLMYICLNSALYSSSFLFAKLPEAYAFLNPIVDVMLVIPVLFFLLAFVWQAAVSFR 318 MLNIFSL+ ICLNS LYSSSF AKLPEAYAFLNPIVDVM VIPVLFFLLAFVWQAAVSFR Sbjct: 1 MLNIFSLICICLNSVLYSSSFFVAKLPEAYAFLNPIVDVMPVIPVLFFLLAFVWQAAVSFR 61
BLAST of CK936590 vs. ExPASy Swiss-Prot
Match: PSBK_GOSHI (Photosystem II reaction center protein K OS=Gossypium hirsutum GN=psbK PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 1.331e-23 Identity = 54/61 (88.52%), Postives = 57/61 (93.44%), Query Frame = 1 Query: 136 MLNIFSLMYICLNSALYSSSFLFAKLPEAYAFLNPIVDVMLVIPVLFFLLAFVWQAAVSFR 318 MLNIF+L+ IC NSAL+SSSFLFAKLPEAYAFLNPIVD M VIPVLFFLLAFVWQAAVSFR Sbjct: 1 MLNIFNLICICFNSALFSSSFLFAKLPEAYAFLNPIVDFMPVIPVLFFLLAFVWQAAVSFR 61
BLAST of CK936590 vs. ExPASy Swiss-Prot
Match: PSBK_GOSBA (Photosystem II reaction center protein K OS=Gossypium barbadense GN=psbK PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 1.331e-23 Identity = 54/61 (88.52%), Postives = 57/61 (93.44%), Query Frame = 1 Query: 136 MLNIFSLMYICLNSALYSSSFLFAKLPEAYAFLNPIVDVMLVIPVLFFLLAFVWQAAVSFR 318 MLNIF+L+ IC NSAL+SSSFLFAKLPEAYAFLNPIVD M VIPVLFFLLAFVWQAAVSFR Sbjct: 1 MLNIFNLICICFNSALFSSSFLFAKLPEAYAFLNPIVDFMPVIPVLFFLLAFVWQAAVSFR 61
BLAST of CK936590 vs. ExPASy Swiss-Prot
Match: PSBK_COFAR (Photosystem II reaction center protein K OS=Coffea arabica GN=psbK PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 2.270e-23 Identity = 52/61 (85.25%), Postives = 55/61 (90.16%), Query Frame = 1 Query: 136 MLNIFSLMYICLNSALYSSSFLFAKLPEAYAFLNPIVDVMLVIPVLFFLLAFVWQAAVSFR 318 MLNIFSL++ICLNSALYSS F F KLPEAYAFLNPI+D M VIPV FFLLAFVWQAAVSFR Sbjct: 1 MLNIFSLIWICLNSALYSSGFFFGKLPEAYAFLNPIIDFMPVIPVFFFLLAFVWQAAVSFR 61
BLAST of CK936590 vs. ExPASy Swiss-Prot
Match: PSBK_PHAAO (Photosystem II reaction center protein K OS=Phalaenopsis aphrodite subsp. formosana GN=psbK PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 2.965e-23 Identity = 52/61 (85.25%), Postives = 55/61 (90.16%), Query Frame = 1 Query: 136 MLNIFSLMYICLNSALYSSSFLFAKLPEAYAFLNPIVDVMLVIPVLFFLLAFVWQAAVSFR 318 MLNIF L+ ICLNS LYSSSF FAKLPEAYAF NPI+DVM +IPVLFFLLAFVWQAAVSFR Sbjct: 1 MLNIFCLICICLNSTLYSSSFFFAKLPEAYAFFNPIIDVMPIIPVLFFLLAFVWQAAVSFR 61
BLAST of CK936590 vs. ExPASy Swiss-Prot
Match: PSBK_PANGI (Photosystem II reaction center protein K OS=Panax ginseng GN=psbK PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 3.872e-23 Identity = 53/61 (86.89%), Postives = 56/61 (91.80%), Query Frame = 1 Query: 136 MLNIFSLMYICLNSALYSSSFLFAKLPEAYAFLNPIVDVMLVIPVLFFLLAFVWQAAVSFR 318 MLNIFSL+ ICLNSALYSSS FAKLPEAYAFLNPIVD+M VIP+ FFLLAFVWQAAVSFR Sbjct: 1 MLNIFSLICICLNSALYSSSLFFAKLPEAYAFLNPIVDLMPVIPLFFFLLAFVWQAAVSFR 61
BLAST of CK936590 vs. ExPASy Swiss-Prot
Match: PSBK_LIRTU (Photosystem II reaction center protein K OS=Liriodendron tulipifera GN=psbK PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 5.058e-23 Identity = 53/61 (86.89%), Postives = 56/61 (91.80%), Query Frame = 1 Query: 136 MLNIFSLMYICLNSALYSSSFLFAKLPEAYAFLNPIVDVMLVIPVLFFLLAFVWQAAVSFR 318 MLNIFSL+ IC+NSAL+SSSF FAKLPEAYAF NPIVDVM VIPVLFFLLA VWQAAVSFR Sbjct: 1 MLNIFSLICICINSALHSSSFFFAKLPEAYAFFNPIVDVMPVIPVLFFLLALVWQAAVSFR 61 The following BLAST results are available for this feature:
BLAST of CK936590 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 62
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Sequences
The
following sequences are available for this feature:
EST sequence >CK936590 ID=CK936590; Name=CK936590; organism=Citrus sinensis; type=EST; length=378bpback to top |