CK936584

Overview
NameCK936584
Unique NameCK936584
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length492
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7124 contig Csv1_Contig7124:276..766. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CK936584 vs. ExPASy Swiss-Prot
Match: EF1A_SOLLC (Elongation factor 1-alpha OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 320.857 bits (821), Expect = 1.983e-87
Identity = 154/162 (95.06%), Postives = 157/162 (96.91%), Query Frame = 3 
Query:    6 ERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGSTLLDAL*HINEPXXP 491
            ERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNP+K+PFVPISGFEGDNMIERSTNLDWYKG TLL+AL  INEP  P
Sbjct:   68 ERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRP 229
[Close]
BLAST of CK936584 vs. ExPASy Swiss-Prot
Match: EF1A_ORYSJ (Elongation factor 1-alpha OS=Oryza sativa subsp. japonica GN=REFA1 PE=2 SV=2)

HSP 1 Score: 320.857 bits (821), Expect = 1.983e-87
Identity = 154/162 (95.06%), Postives = 157/162 (96.91%), Query Frame = 3 
Query:    6 ERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGSTLLDAL*HINEPXXP 491
            ERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNP+K+PFVPISGFEGDNMIERSTNLDWYKG TLL+AL  INEP  P
Sbjct:   68 ERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRP 229
[Close]
BLAST of CK936584 vs. ExPASy Swiss-Prot
Match: EF1A_ARATH (Elongation factor 1-alpha OS=Arabidopsis thaliana GN=A1 PE=1 SV=1)

HSP 1 Score: 320.472 bits (820), Expect = 2.590e-87
Identity = 153/162 (94.44%), Postives = 157/162 (96.91%), Query Frame = 3 
Query:    6 ERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGSTLLDAL*HINEPXXP 491
            ERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEI+KEVSSYLKKVGYNP+K+PFVPISGFEGDNMIERSTNLDWYKG TLL+AL  INEP  P
Sbjct:   68 ERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRP 229
[Close]
BLAST of CK936584 vs. ExPASy Swiss-Prot
Match: EF1A_WHEAT (Elongation factor 1-alpha OS=Triticum aestivum GN=TEF1 PE=2 SV=1)

HSP 1 Score: 319.701 bits (818), Expect = 4.418e-87
Identity = 154/162 (95.06%), Postives = 157/162 (96.91%), Query Frame = 3 
Query:    6 ERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGSTLLDAL*HINEPXXP 491
            ERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARY+EIVKEVSSYLKKVGYNP+KVPFVPISGFEGDNMIERSTNLDWYKG TLL+AL  INEP  P
Sbjct:   68 ERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYEEIVKEVSSYLKKVGYNPDKVPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRP 229
[Close]
BLAST of CK936584 vs. ExPASy Swiss-Prot
Match: EF1A_SOYBN (Elongation factor 1-alpha OS=Glycine max GN=TEFS1 PE=3 SV=2)

HSP 1 Score: 319.316 bits (817), Expect = 5.771e-87
Identity = 153/162 (94.44%), Postives = 157/162 (96.91%), Query Frame = 3 
Query:    6 ERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGSTLLDAL*HINEPXXP 491
            ERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALL+FTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNP+K+PFVPISGFEGDNMIERSTNLDWYKG TLLDAL  I+EP  P
Sbjct:   68 ERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLSFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDQISEPKRP 229
[Close]
BLAST of CK936584 vs. ExPASy Swiss-Prot
Match: EF1A_MANES (Elongation factor 1-alpha OS=Manihot esculenta GN=EF1 PE=3 SV=1)

HSP 1 Score: 318.546 bits (815), Expect = 9.843e-87
Identity = 153/162 (94.44%), Postives = 156/162 (96.30%), Query Frame = 3 
Query:    6 ERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGSTLLDAL*HINEPXXP 491
            ERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNP+K+PFVPISGFEGDNMIERSTNLDWYKG TLL+AL  I EP  P
Sbjct:   68 ERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQIQEPKRP 229
[Close]
BLAST of CK936584 vs. ExPASy Swiss-Prot
Match: EF1A_VICFA (Elongation factor 1-alpha OS=Vicia faba PE=2 SV=1)

HSP 1 Score: 318.161 bits (814), Expect = 1.286e-86
Identity = 152/162 (93.83%), Postives = 157/162 (96.91%), Query Frame = 3 
Query:    6 ERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGSTLLDAL*HINEPXXP 491
            ERGITIDIALWKFET+KYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSK RY+EIVKEVSSYLKKVGYNP+K+PFVPISGFEGDNMIERSTNLDWYKG TLLDAL +INEP  P
Sbjct:   68 ERGITIDIALWKFETSKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKGRYEEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRP 229
[Close]
BLAST of CK936584 vs. ExPASy Swiss-Prot
Match: EF1A_TOBAC (Elongation factor 1-alpha OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 316.62 bits (810), Expect = 3.740e-86
Identity = 152/162 (93.83%), Postives = 156/162 (96.30%), Query Frame = 3 
Query:    6 ERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGSTLLDAL*HINEPXXP 491
            ERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNP+K+PFVPISGFEGDNMIERSTNLDWYKG TLL+AL  IN+   P
Sbjct:   68 ERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINDAKRP 229
[Close]
BLAST of CK936584 vs. ExPASy Swiss-Prot
Match: EF1A1_DAUCA (Elongation factor 1-alpha OS=Daucus carota PE=3 SV=1)

HSP 1 Score: 316.62 bits (810), Expect = 3.740e-86
Identity = 153/162 (94.44%), Postives = 154/162 (95.06%), Query Frame = 3 
Query:    6 ERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGSTLLDAL*HINEPXXP 491
            ERGITIDIALWKFET KYYCTVIDAPGHRDFIKNMITGTSQADCAVLIID TTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEK+ FVPISGFEGDNMIERSTNLDWYKG TLLDAL  INEP  P
Sbjct:   68 ERGITIDIALWKFETNKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDPTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKIAFVPISGFEGDNMIERSTNLDWYKGPTLLDALDQINEPKRP 229
[Close]
BLAST of CK936584 vs. ExPASy Swiss-Prot
Match: EF1A_MAIZE (Elongation factor 1-alpha OS=Zea mays GN=EF1A PE=3 SV=1)

HSP 1 Score: 316.235 bits (809), Expect = 4.885e-86
Identity = 153/162 (94.44%), Postives = 156/162 (96.30%), Query Frame = 3 
Query:    6 ERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGSTLLDAL*HINEPXXP 491
            ERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNP+K+ FVPISGFEGDNMIERSTNLDWYKG TLL+AL  INEP  P
Sbjct:   68 ERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIHFVPISGFEGDNMIERSTNLDWYKGPTLLEALDLINEPKRP 229
The following BLAST results are available for this feature:
BLAST of CK936584 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EF1A_SOLLC1.983e-8795.06Elongation factor 1-alpha OS=Solanum lycopersicum ... [more]
EF1A_ORYSJ1.983e-8795.06Elongation factor 1-alpha OS=Oryza sativa subsp. j... [more]
EF1A_ARATH2.590e-8794.44Elongation factor 1-alpha OS=Arabidopsis thaliana ... [more]
EF1A_WHEAT4.418e-8795.06Elongation factor 1-alpha OS=Triticum aestivum GN=... [more]
EF1A_SOYBN5.771e-8794.44Elongation factor 1-alpha OS=Glycine max GN=TEFS1 ... [more]
EF1A_MANES9.843e-8794.44Elongation factor 1-alpha OS=Manihot esculenta GN=... [more]
EF1A_VICFA1.286e-8693.83Elongation factor 1-alpha OS=Vicia faba PE=2 SV=1[more]
EF1A_TOBAC3.740e-8693.83Elongation factor 1-alpha OS=Nicotiana tabacum PE=... [more]
EF1A1_DAUCA3.740e-8694.44Elongation factor 1-alpha OS=Daucus carota PE=3 SV... [more]
EF1A_MAIZE4.885e-8694.44Elongation factor 1-alpha OS=Zea mays GN=EF1A PE=3... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004520_F12 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0001_IIIF_F12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK936584 ID=CK936584; Name=CK936584; organism=Citrus sinensis; type=EST; length=492bp
AGTGTGAACGTGGTATTACCATTGATATTGCCTTGTGGAAGTTCGAGACC
ACCAAGTACTACTGCACCGTCATTGATGCTCCCGGACATCGTGACTTTAT
CAAGAACATGATTACCGGTACCTCACAGGCTGACTGTGCCGTCCTTATCA
TTGACTCCACCACCGGTGGTTTTGAAGCTGGTATCTCCAAGGATGGTCAG
ACTCGTGAGCATGCTTTGCTTGCTTTCACCCTTGGTGTGAAGCAGATGAT
TTGCTGCTGTAACAAGATGGACGCCACCACCCCCAAGTACTCAAAGGCTA
GGTACGATGAAATTGTGAAGGAGGTCTCTTCCTACCTGAAGAAGGTTGGA
TACAACCCCGAGAAAGTCCCATTCGTGCCCATCTCTGGTTTCGAGGGTGA
CAACATGATTGAGAGGTCTACCAACCTTGACTGGTACAAGGGGTCCACCC
TGCTGGACGCTCTTTGACATATCAATGAGCCAAANGNGCCCT
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