CX675158

Overview
NameCX675158
Unique NameCX675158
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length611
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig760 contig Csv1_Contig760:999..1609. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX675158 vs. ExPASy Swiss-Prot
Match: DNJH_CUCSA (DnaJ protein homolog OS=Cucumis sativus GN=DNAJ1 PE=2 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 2.712e-49
Identity = 95/114 (83.33%), Postives = 104/114 (91.23%), Query Frame = -1
Query:  270 THWDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFLRGKLYIHFSVDFPESLSPDQCKMLETVLPPRTSVQLTDMERDECEETTLPDVNIEGEMRRKQQAAPEAYDEDDDL 611
            TH DGRQLLIKS PGEVVKPDQFKAINDEGMPMYQRPF++GKLYIHFSV+FP+SL+P+QCK LE VLPPRTSVQL+DME DECEETTL DVNIE EMRRKQ  A EAYDED+D+
Sbjct:  290 THLDGRQLLIKSLPGEVVKPDQFKAINDEGMPMYQRPFMKGKLYIHFSVEFPDSLNPEQCKALEGVLPPRTSVQLSDMELDECEETTLHDVNIEEEMRRKQ--AQEAYDEDEDM 401          
BLAST of CX675158 vs. ExPASy Swiss-Prot
Match: DNJH2_ALLPO (DnaJ protein homolog 2 OS=Allium porrum GN=LDJ2 PE=2 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 2.538e-47
Identity = 91/114 (79.82%), Postives = 100/114 (87.72%), Query Frame = -1
Query:  273 THWDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFLRGKLYIHFSVDFPESLSPDQCKMLETVLPPRTSVQLTDMERDECEETTLPDVNIEGEMRRKQ-QAAPEAYDEDDD 611
            TH D RQLLIKS PGEV+KPDQFK INDEGMPMYQRPF+RGKLYIHFSVDFP+SL+PDQCK LE+VLP R + +LTDME DECEETT+ DVNIE EMRRKQ Q A EAYDEDD+
Sbjct:  292 THLDNRQLLIKSNPGEVIKPDQFKGINDEGMPMYQRPFMRGKLYIHFSVDFPDSLTPDQCKALESVLPSRNASRLTDMEIDECEETTMHDVNIEEEMRRKQHQQAQEAYDEDDE 405          
BLAST of CX675158 vs. ExPASy Swiss-Prot
Match: DNJH1_ALLPO (DnaJ protein homolog 1 (Fragment) OS=Allium porrum GN=DNAJ1 PE=2 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 7.385e-47
Identity = 92/114 (80.70%), Postives = 100/114 (87.72%), Query Frame = -1
Query:  273 THWDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFLRGKLYIHFSVDFPESLSPDQCKMLETVLPPRTSVQLTDMERDECEETTLPDVNIEGEMRRKQ-QAAPEAYDEDDD 611
            TH DGRQLLIKS PGEVVKPDQFKAINDEGMPMYQRPF+RGKLYI F VDFP+SL+PDQCK++E+VLP   S QLTDME DECEETT+ DVNIE EMRRKQ Q A EAYDEDD+
Sbjct:  271 THLDGRQLLIKSNPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIQFLVDFPDSLTPDQCKVIESVLPRSASSQLTDMEIDECEETTMHDVNIEEEMRRKQHQHAQEAYDEDDE 384          
BLAST of CX675158 vs. ExPASy Swiss-Prot
Match: DNAJ3_ARATH (Chaperone protein dnaJ 3 OS=Arabidopsis thaliana GN=ATJ3 PE=1 SV=2)

HSP 1 Score: 177.563 bits (449), Expect = 4.480e-44
Identity = 84/113 (74.34%), Postives = 97/113 (85.84%), Query Frame = -1
Query:  273 THWDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFLRGKLYIHFSVDFPESLSPDQCKMLETVLPPRTSVQLTDMERDECEETTLPDVNIEGEMRRKQQAAPEAYDEDDD 611
            TH DGR LLIKS PGEVVKPD +KAI+DEGMP+YQRPF++GKLYIHF+V+FP+SLSPDQ K LE VLP  ++ QL+DME DECEETTL DVNIE EMRRK QA  EAYD+DD+
Sbjct:  292 THLDGRSLLIKSNPGEVVKPDSYKAISDEGMPIYQRPFMKGKLYIHFTVEFPDSLSPDQTKALEAVLPKPSTAQLSDMEIDECEETTLHDVNIEDEMRRKAQAQREAYDDDDE 404          
BLAST of CX675158 vs. ExPASy Swiss-Prot
Match: DNJH_ATRNU (DnaJ protein homolog ANJ1 OS=Atriplex nummularia PE=2 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 6.469e-43
Identity = 84/114 (73.68%), Postives = 98/114 (85.96%), Query Frame = -1
Query:  273 THWDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFLRGKLYIHFSVDFPESLSPDQCKMLETVLPPRTSVQLTDMERDECEETTLPDVNIEGEMRRKQ-QAAPEAYDEDDD 611
            TH DGRQLLIKS  GEVVKPDQFKAI DEGMP+YQRPF++GK+YIHF+V+FP+SL+PDQ K LE +LPP+ S+ LT ME DECEETTL +VNIE EM+RKQ QA  EAYDEDD+
Sbjct:  292 THLDGRQLLIKSNLGEVVKPDQFKAIEDEGMPIYQRPFMKGKMYIHFTVEFPDSLNPDQVKSLEAILPPKPSMSLTYMELDECEETTLHNVNIEEEMKRKQTQAQQEAYDEDDE 405          
BLAST of CX675158 vs. ExPASy Swiss-Prot
Match: DNAJ2_ARATH (Chaperone protein dnaJ 2 OS=Arabidopsis thaliana GN=ATJ2 PE=1 SV=2)

HSP 1 Score: 171.4 bits (433), Expect = 3.211e-42
Identity = 80/113 (70.80%), Postives = 96/113 (84.96%), Query Frame = -1
Query:  273 THWDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFLRGKLYIHFSVDFPESLSPDQCKMLETVLPPRTSVQLTDMERDECEETTLPDVNIEGEMRRKQQAAPEAYDEDDD 611
            TH D RQLLIKS+PGEVVKPD +KAI+DEGMP+YQRPF++GKLYIHF+V+FPESLSPDQ K +E VLP  T   ++DME D+CEETTL DVNIE EM+RK QA  EAYD+D++
Sbjct:  293 THLDKRQLLIKSKPGEVVKPDSYKAISDEGMPIYQRPFMKGKLYIHFTVEFPESLSPDQTKAIEAVLPKPTKAAISDMEIDDCEETTLHDVNIEDEMKRKAQAQREAYDDDEE 405          
BLAST of CX675158 vs. ExPASy Swiss-Prot
Match: DNJA1_RAT (DnaJ homolog subfamily A member 1 OS=Rattus norvegicus GN=Dnaja1 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.358e-16
Identity = 46/111 (41.44%), Postives = 69/111 (62.16%), Query Frame = -1
Query:  276 DGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFLRGKLYIHFSVDFPES--LSPDQCKMLETVLPPRTSVQLTDMERDECEETTLPDVNIEGEMRRKQQAAPEAYDEDD 602
            D R ++I S PG++VK    K + +EGMP+Y+RP+ +G+L I F V+FPE+  LSPD+  +LE +LP R  V+    E DE ++  L D +   E RR      EAY++D+
Sbjct:  281 DNRTIVITSHPGQIVKHGDIKCVLNEGMPIYRRPYEKGRLIIEFKVNFPENGFLSPDKLSLLEKLLPERKEVE----ETDEMDQVELVDFDPNQERRRHYNG--EAYEDDE 385          
BLAST of CX675158 vs. ExPASy Swiss-Prot
Match: DNJA1_PONAB (DnaJ homolog subfamily A member 1 OS=Pongo abelii GN=DNAJA1 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.358e-16
Identity = 46/111 (41.44%), Postives = 69/111 (62.16%), Query Frame = -1
Query:  276 DGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFLRGKLYIHFSVDFPES--LSPDQCKMLETVLPPRTSVQLTDMERDECEETTLPDVNIEGEMRRKQQAAPEAYDEDD 602
            D R ++I S PG++VK    K + +EGMP+Y+RP+ +G+L I F V+FPE+  LSPD+  +LE +LP R  V+    E DE ++  L D +   E RR      EAY++D+
Sbjct:  280 DNRTIVITSHPGQIVKHGDIKCVLNEGMPIYRRPYEKGRLIIEFKVNFPENGFLSPDKLSLLEKLLPERKEVE----ETDEMDQVELVDFDPNQERRRHYNG--EAYEDDE 384          
BLAST of CX675158 vs. ExPASy Swiss-Prot
Match: DNJA1_MOUSE (DnaJ homolog subfamily A member 1 OS=Mus musculus GN=Dnaja1 PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.358e-16
Identity = 46/111 (41.44%), Postives = 69/111 (62.16%), Query Frame = -1
Query:  276 DGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFLRGKLYIHFSVDFPES--LSPDQCKMLETVLPPRTSVQLTDMERDECEETTLPDVNIEGEMRRKQQAAPEAYDEDD 602
            D R ++I S PG++VK    K + +EGMP+Y+RP+ +G+L I F V+FPE+  LSPD+  +LE +LP R  V+    E DE ++  L D +   E RR      EAY++D+
Sbjct:  281 DNRTIVITSHPGQIVKHGDIKCVLNEGMPIYRRPYEKGRLIIEFKVNFPENGFLSPDKLSLLEKLLPERKEVE----ETDEMDQVELVDFDPNQERRRHYNG--EAYEDDE 385          
BLAST of CX675158 vs. ExPASy Swiss-Prot
Match: DNJA1_HUMAN (DnaJ homolog subfamily A member 1 OS=Homo sapiens GN=DNAJA1 PE=1 SV=2)

HSP 1 Score: 86.2705 bits (212), Expect = 1.358e-16
Identity = 46/111 (41.44%), Postives = 69/111 (62.16%), Query Frame = -1
Query:  276 DGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFLRGKLYIHFSVDFPES--LSPDQCKMLETVLPPRTSVQLTDMERDECEETTLPDVNIEGEMRRKQQAAPEAYDEDD 602
            D R ++I S PG++VK    K + +EGMP+Y+RP+ +G+L I F V+FPE+  LSPD+  +LE +LP R  V+    E DE ++  L D +   E RR      EAY++D+
Sbjct:  281 DNRTIVITSHPGQIVKHGDIKCVLNEGMPIYRRPYEKGRLIIEFKVNFPENGFLSPDKLSLLEKLLPERKEVE----ETDEMDQVELVDFDPNQERRRHYNG--EAYEDDE 385          
The following BLAST results are available for this feature:
BLAST of CX675158 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 18
Match NameE-valueIdentityDescription
DNJH_CUCSA2.712e-4983.33DnaJ protein homolog OS=Cucumis sativus GN=DNAJ1 P... [more]
DNJH2_ALLPO2.538e-4779.82DnaJ protein homolog 2 OS=Allium porrum GN=LDJ2 PE... [more]
DNJH1_ALLPO7.385e-4780.70DnaJ protein homolog 1 (Fragment) OS=Allium porrum... [more]
DNAJ3_ARATH4.480e-4474.34Chaperone protein dnaJ 3 OS=Arabidopsis thaliana G... [more]
DNJH_ATRNU6.469e-4373.68DnaJ protein homolog ANJ1 OS=Atriplex nummularia P... [more]
DNAJ2_ARATH3.211e-4270.80Chaperone protein dnaJ 2 OS=Arabidopsis thaliana G... [more]
DNJA1_RAT1.358e-1641.44DnaJ homolog subfamily A member 1 OS=Rattus norveg... [more]
DNJA1_PONAB1.358e-1641.44DnaJ homolog subfamily A member 1 OS=Pongo abelii ... [more]
DNJA1_MOUSE1.358e-1641.44DnaJ homolog subfamily A member 1 OS=Mus musculus ... [more]
DNJA1_HUMAN1.358e-1641.44DnaJ homolog subfamily A member 1 OS=Homo sapiens ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_60C03_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-60C03-E6-1-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX675158 ID=CX675158; Name=CX675158; organism=Citrus sinensis; type=EST; length=611bp
TTTTTTTTTTTTTTTTTAAACACTAAAAATATTAATTATGAGCATTGAGT
CTGAAGGTGCAAACGCTAGAATTCCATTACATAGTCAGTTATCAAAAAAA
CATAAAAATAAAGACAGACAAACCAAAACTAGAACCTCTAAAGCCTATAA
AAAAAAATAAATATGTTGAGAATCTTTTTCTCCCAAACAATGAAAATACT
AAATCAGGCCACCCCTTTTCTTCTACATCATCACTGCTGAGCACACTGCA
CTCTCTGGGCACCACCTTGCAAATCGTCATCTTCATCGTAGGCCTCCGGA
GCTGCTTGTTGCTTCCTTCGCATTTCCCCCTCAATGTTCACATCAGGCAG
GGTTGTTTCTTCACACTCATCCCGTTCCATATCGGTGAGCTGGACGGAGG
TCCTTGGAGGTAGTACGGTCTCCAGCATCTTGCACTGGTCTGGGCTCAGT
GACTCAGGGAAGTCAACACTGAAATGAATGTACAGTTTGCCCCTCAAAAA
TGGCCTCTGATACATAGGCATTCCTTCATCATTTATGGCCTTGAATTGGT
CCGGCTTGACTACTTCCCCAGGCTGGGATTTGATGAGGAGTTGCCGGCCA
TCCCAATGAGT
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