CK936569

Overview
NameCK936569
Unique NameCK936569
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length822
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1940 contig Csv1_Contig1940:1..824. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK936569 vs. ExPASy Swiss-Prot
Match: EM506_ARATH (Ankyrin repeat domain-containing protein EMB506, chloroplastic OS=Arabidopsis thaliana GN=EMB506 PE=1 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 2.243e-63
Identity = 78/97 (80.41%), Postives = 91/97 (93.81%), Query Frame = 3
Query:  264 EKDGATPLHYAVQVGAMQSVKLLIKYNVDVNVADNEGWTPLHIAIQSRNRDIAKVLLINGADKSRKTKDGKTALDMSLCYGRDFKSYDLAKLLKILP 554
            ++DGA P+HYAVQVGA+Q+VKLL KYNVDVNVADNEGWTPLHIA+QSRNRDI K+LL NGADK+R+TKDGK ALD++LC+GRDFKSYDL KLLKI+P
Sbjct:  215 DRDGAAPIHYAVQVGALQTVKLLFKYNVDVNVADNEGWTPLHIAVQSRNRDITKILLTNGADKTRRTKDGKLALDLALCFGRDFKSYDLVKLLKIMP 311          

HSP 2 Score: 92.4337 bits (228), Expect = 2.243e-63
Identity = 49/70 (70.00%), Postives = 50/70 (71.43%), Query Frame = 2
Query:   62 QNATPNLGKISTAKWKPLQTLALSMQIRYXXXXXXXXXXIDSVDKDGLTALHKAIIGKKEAVISHLLRKG 271
            QN  PNL  IST  WKPLQTLALSMQI+           ID VDKD  TALHKAIIGKKEAVISHLLRKG
Sbjct:  139 QNEKPNLKMISTKSWKPLQTLALSMQIQLMDNLIENGLDIDDVDKDNQTALHKAIIGKKEAVISHLLRKG 208          
BLAST of CK936569 vs. ExPASy Swiss-Prot
Match: AKRP_ARATH (Ankyrin repeat domain-containing protein, chloroplastic OS=Arabidopsis thaliana GN=AKRP PE=1 SV=2)

HSP 1 Score: 109.383 bits (272), Expect = 1.511e-32
Identity = 49/98 (50.00%), Postives = 69/98 (70.41%), Query Frame = 3
Query:  264 EKDGATPLHYAVQVGAMQSVKLLIKYNVDVNVADNEGWTPLHIAIQSRNRDIAKVLLINGADKSRKTKDGKTALDMSLCYGRDFKSYDLAKLLKILPV 557
            + +GAT +HYAVQ  +  ++KLL+ YN D+N  D +GWTPLH+A+Q+R  DI K+LLI GAD   K KDG T L + L  GR+ ++Y++ KLLK  P+
Sbjct:  323 DDEGATLMHYAVQTASAPTIKLLLLYNADINAQDRDGWTPLHVAVQARRSDIVKLLLIKGADIEVKNKDGLTPLGLCLYLGREIRTYEVMKLLKEFPL 420          

HSP 2 Score: 51.9878 bits (123), Expect = 1.511e-32
Identity = 26/65 (40.00%), Postives = 38/65 (58.46%), Query Frame = 2
Query:   74 PNLGKISTAKWKPLQTLALSMQIRYXXXXXXXXXXIDSVDKDGLTALHKAIIGKKEAVISHLLRK 268
            P+L   ++ KW PL TLA   +             I++ D  GLT LH+AIIGKK+A+ ++LLR+
Sbjct:  251 PDLAVATSKKWLPLHTLAACGEFYLVDSLLKHNLDINATDVGGLTVLHRAIIGKKQAITNYLLRE 315          
BLAST of CK936569 vs. ExPASy Swiss-Prot
Match: AKD1A_HUMAN (Ankyrin repeat and death domain-containing protein 1A OS=Homo sapiens GN=ANKDD1A PE=2 SV=2)

HSP 1 Score: 65.4698 bits (158), Expect = 1.545e-11
Identity = 35/78 (44.87%), Postives = 49/78 (62.82%), Query Frame = 3
Query:  264 EKDGATPLHYAVQVGAMQSVKLLIKYNVDVNVADNEGWTPLHIAIQSRNRDIAKVLLINGADKSRKTKDGKTALDMSL 497
            +  GA+PLH AV+      V+LLI  + DVN  DN   TPLH+A +   +DIA +LLI G D + + K GKTAL +++
Sbjct:  288 DHQGASPLHLAVRHNFPALVRLLINSDSDVNAVDNRQQTPLHLAAEHAWQDIADMLLIAGVDLNLRDKQGKTALAVAV 365          

HSP 2 Score: 25.0238 bits (53), Expect = 1.545e-11
Identity = 12/31 (38.71%), Postives = 17/31 (54.84%), Query Frame = 2
Query:  179 IDSVDKDGLTALHKAIIGKKEAVISHLLRKG 271
            ++  + +GLTALH A  G     +  LLR G
Sbjct:  218 LEEQNAEGLTALHSAAGGSHPDCVQLLLRAG 248          
BLAST of CK936569 vs. ExPASy Swiss-Prot
Match: Y381_RICFE (Putative ankyrin repeat protein RF_0381 OS=Rickettsia felis GN=RF_0381 PE=4 SV=1)

HSP 1 Score: 63.1586 bits (152), Expect = 3.304e-11
Identity = 35/90 (38.89%), Postives = 50/90 (55.56%), Query Frame = 3
Query:  273 GATPLHYAVQVGAMQSVKLLIKYNVDVNVADNEGWTPLHIAIQSRNRDIAKVLLINGADKSRKTKDGKTALDMSLCYGRDFKSYDLAKLL 542
            G T LH+AV +G++  V LL+    DVN   ++G T LH A++S N  +  +L++ GAD + K   G+T L     Y   F S DL  LL
Sbjct: 1030 GETILHFAVDLGSLDLVSLLMVRGADVNAKTDDGLTALHYAVESDNLALVSLLMVYGADVNAKNNSGETPLH----YAVIFNSLDLVSLL 1115          

HSP 2 Score: 26.1794 bits (56), Expect = 3.304e-11
Identity = 13/31 (41.94%), Postives = 19/31 (61.29%), Query Frame = 2
Query:  179 IDSVDKDGLTALHKAIIGKKEAVISHLLRKG 271
            I++   DGLTALH A+      ++S L+ KG
Sbjct:  990 INTKTDDGLTALHYAVESGNLNLVSLLIHKG 1020          

HSP 3 Score: 68.1662 bits (165), Expect = 6.465e-11
Identity = 34/72 (47.22%), Postives = 44/72 (61.11%), Query Frame = 3
Query:  270 DGATPLHYAVQVGAMQSVKLLIKYNVDVNVADNEGWTPLHIAIQSRNRDIAKVLLINGADKSRKTKDGKTAL 485
            DG T LHYAV+ G +  V LLI   +DVN   N G T LH A+   + D+  +L++ GAD + KT DG TAL
Sbjct:  996 DGLTALHYAVESGNLNLVSLLIHKGIDVNAKTNSGETILHFAVDLGSLDLVSLLMVRGADVNAKTDDGLTAL 1067          
BLAST of CK936569 vs. ExPASy Swiss-Prot
Match: ANKK1_MOUSE (Ankyrin repeat and protein kinase domain-containing protein 1 OS=Mus musculus GN=Ankk1 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.444e-11
Identity = 31/81 (38.27%), Postives = 51/81 (62.96%), Query Frame = 3
Query:  264 EKDGATPLHYAVQVGAMQSVKLLIKYNVDVNVADNEGWTPLHIAIQSRNRDIAKVLLINGADKSRKTKDGKTALDMSLCYG 506
            ++DG  PLH+A Q G   + +LL+ +   VN  ++EGWTPLH+A Q+   ++A++L+   AD S    +GKT L ++  +G
Sbjct:  433 DEDGWAPLHFAAQNGDDHTARLLLDHGALVNAREHEGWTPLHLAAQNNFENVARLLVSRQADLSPHEAEGKTPLHVAAYFG 513          
The following BLAST results are available for this feature:
BLAST of CK936569 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
EM506_ARATH2.243e-6380.41Ankyrin repeat domain-containing protein EMB506, c... [more]
AKRP_ARATH1.511e-3250.00Ankyrin repeat domain-containing protein, chloropl... [more]
AKD1A_HUMAN1.545e-1144.87Ankyrin repeat and death domain-containing protein... [more]
Y381_RICFE3.304e-1138.89Putative ankyrin repeat protein RF_0381 OS=Rickett... [more]
ANKK1_MOUSE8.444e-1138.27Ankyrin repeat and protein kinase domain-containin... [more]
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Properties
Property NameValue
Genbank descriptionCGF1004520_G05 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0001_IIIF_G05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK936569 ID=CK936569; Name=CK936569; organism=Citrus sinensis; type=EST; length=822bp
GGGGGATCTGCTGAAAGAGGTTGAGCAGCTTTTGGAGCCAGAGGAGAGAG
AAATTTTGAACCAGAATGCCACTCCTAACTTGGGAAAAATTTCAACTGCA
AAATGGAAGCCACTGCAGACTCTCGCACTATCAATGCAGATACGTTATAT
GGATATGCTACTTGACGGTGGGCTTGATATAGATAGTGTCGACAAGGATG
GTCTCACTGCTCTTCATAAGGCAATAATTGGCAAAAAGGAGGCTGTAATT
AGTCATCTCTTAAGAAAAGGATGGTGCTACTCCACTTCATTACGCAGTTC
AAGTTGGTGCCATGCAGAGTGTGAAGTTATTAATCAAGTACAATGTTGAT
GTCAACGTTGCAGATAATGAAGGATGGACTCCATTGCATATTGCCATACA
AAGTAGAAATAGAGACATAGCAAAAGTATTGTTAATTAATGGTGCTGACA
AGTCGAGGAAAACCAAGGATGGGAAAACAGCTCTCGATATGAGCTTGTGT
TATGGGAGAGACTTCAAGTCTTACGACCTTGCCAAGTTACTGAAGATTTT
GCCGGTTGAATGAGATGTACGATGGACGGGTAGGATCCCGAACATTTGAT
ATGCAGTTTGAAGTTAAAAGAGAATCCTTCACGCGGTGTGAGCTACCTTG
CATTTTGAAGATGGCACAAGCCTTTCTCTGAACATCAGGAAAGACACTTG
TGAGAGCTTACATATGCATGTAGATTTGTTAGACTACTAGTAGAATCGAG
CTGTGTGAGCTGCTGTCAGTCGATTTCGTACATGATCAATATGATGACTT
GTATATGAAGGGCATGTCCCTT
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