CK936538
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK936538 vs. ExPASy Swiss-Prot
Match: NTF2_ARATH (Nuclear transport factor 2 OS=Arabidopsis thaliana GN=NTF2 PE=2 SV=1) HSP 1 Score: 217.238 bits (552), Expect = 7.908e-56 Identity = 103/119 (86.55%), Postives = 111/119 (93.28%), Query Frame = 1 Query: 121 NQMDPDSVAKAFVEHYYTTFDANRTGLANLYQEGSMLTFEGQKIQGSQNIVAKLTSLPFQQCQHSITTVDCQPSGPAGGMLVFVSGNLQLAGEQHALKFSQMFHLMPTPQGSFYVLNDI 477 +QMDPD+V+KAFVEHYY+TFD NR GLA LYQE SMLTFEGQKIQG Q+IVAKLTSLPFQQC+H I+TVDCQPSGPA GMLVFVSGNLQLAGE+HALKFSQMFHLMPTPQGSFYV NDI Sbjct: 2 SQMDPDAVSKAFVEHYYSTFDTNRVGLAGLYQEASMLTFEGQKIQGVQSIVAKLTSLPFQQCKHHISTVDCQPSGPASGMLVFVSGNLQLAGEEHALKFSQMFHLMPTPQGSFYVFNDI 120
BLAST of CK936538 vs. ExPASy Swiss-Prot
Match: NTF2_ORYSJ (Nuclear transport factor 2 OS=Oryza sativa subsp. japonica GN=NTF2 PE=2 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 6.726e-39 Identity = 78/117 (66.67%), Postives = 90/117 (76.92%), Query Frame = 1 Query: 127 MDPDSVAKAFVEHYYTTFDANRTGLANLYQEGSMLTFEGQKIQGSQNIVAKLTSLPFQQCQHSITTVDCQPSGPAGGMLVFVSGNLQLAGEQHALKFSQMFHLMPTPQGSFYVLNDI 477 MD D+VAKAFVEHYY TFD NR L +LYQ+GSMLTFEGQ+ G+ I KL SLPF QC H I TVDCQPSGP GGMLVFVSG+L+ ++H LKFSQMF L+P G+FYV ND+ Sbjct: 1 MDADAVAKAFVEHYYRTFDTNRPALVSLYQDGSMLTFEGQQFLGAAAIAGKLGSLPFAQCHHDINTVDCQPSGPQGGMLVFVSGSLRTGPDEHPLKFSQMFQLLPA-GGNFYVQNDM 116
BLAST of CK936538 vs. ExPASy Swiss-Prot
Match: NTF2_EMENI (Nuclear transport factor 2 OS=Emericella nidulans GN=ntf2 PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 6.310e-29 Identity = 62/116 (53.45%), Postives = 82/116 (70.69%), Query Frame = 1 Query: 130 DPDSVAKAFVEHYYTTFDANRTGLANLYQEGSMLTFEGQKIQGSQNIVAKLTSLPFQQCQHSITTVDCQPSGPAGGMLVFVSGNLQLAGEQHALKFSQMFHLMPTPQGSFYVLNDI 477 D S+A+ FV YY TFD NR GLA LY++ SMLTFE IQG I+ KLTSLPFQ+ QH ++T+D QPSG GG+LV V+G L + E++ + ++Q F LMP GS++VLND+ Sbjct: 3 DFQSIAQQFVTFYYQTFDGNRAGLAPLYRDHSMLTFETSAIQGVAGIIEKLTSLPFQKVQHQVSTLDAQPSGEHGGILVLVTGALLVDEEKNPMNYTQTFQLMPDGAGSYFVLNDV 118
BLAST of CK936538 vs. ExPASy Swiss-Prot
Match: NTF2_ASHGO (Nuclear transport factor 2 OS=Ashbya gossypii GN=NTF2 PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 1.076e-28 Identity = 62/117 (52.99%), Postives = 86/117 (73.50%), Query Frame = 1 Query: 127 MDPDSVAKAFVEHYYTTFDANRTGLANLYQEGSMLTFEGQKIQGSQNIVAKLTSLPFQQCQHSITTVDCQPSGPAGGMLVFVSGNLQLAGEQHALKFSQMFHLMPTPQGSFYVLNDI 477 MD ++A+ F E YY FD +R+ L NLY++ SMLTFE ++QG+++IV KL SLPFQ+ QH ITT+D QP+ P G +LV ++G+L + EQ+A +FSQ+FHLMP S+YV NDI Sbjct: 3 MDFSALAQQFTEFYYNQFDTDRSQLGNLYRDQSMLTFETSQLQGAKDIVEKLVSLPFQKVQHRITTLDAQPASPNGDVLVMITGDLLIDDEQNAQRFSQVFHLMP-EGNSYYVFNDI 118
BLAST of CK936538 vs. ExPASy Swiss-Prot
Match: NTF2_KLULA (Nuclear transport factor 2 OS=Kluyveromyces lactis GN=NTF2 PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 6.976e-28 Identity = 62/117 (52.99%), Postives = 85/117 (72.65%), Query Frame = 1 Query: 127 MDPDSVAKAFVEHYYTTFDANRTGLANLYQEGSMLTFEGQKIQGSQNIVAKLTSLPFQQCQHSITTVDCQPSGPAGGMLVFVSGNLQLAGEQHALKFSQMFHLMPTPQGSFYVLNDI 477 +D S+A+ F E YY FD++RT L NLY+E SMLTFE ++QG+++IV KL SLPFQ+ H ITT+D QP+ P G +LV ++G+L + EQ+ +FSQ+FHLMP S+YV NDI Sbjct: 3 VDFSSLAQQFTEFYYNQFDSDRTQLGNLYREQSMLTFETTQLQGAKDIVEKLVSLPFQKVAHRITTLDAQPASPNGDVLVMITGDLLIDEEQNPQRFSQVFHLMP-EGSSYYVYNDI 118
BLAST of CK936538 vs. ExPASy Swiss-Prot
Match: NTF2_CANGA (Nuclear transport factor 2 OS=Candida glabrata GN=NTF2 PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 3.462e-27 Identity = 59/117 (50.43%), Postives = 86/117 (73.50%), Query Frame = 1 Query: 127 MDPDSVAKAFVEHYYTTFDANRTGLANLYQEGSMLTFEGQKIQGSQNIVAKLTSLPFQQCQHSITTVDCQPSGPAGGMLVFVSGNLQLAGEQHALKFSQMFHLMPTPQGSFYVLNDI 477 MD +++A+ F E YY FD++R+ L NLY++ SMLTFE ++QG+++IV KL SLPFQ+ H ITT+D QP+ P G +LV ++G+L + EQ+ +FSQ+FHL+P S+YV NDI Sbjct: 3 MDFNALAQQFTEFYYNQFDSDRSQLGNLYRDESMLTFETSQLQGAKSIVEKLVSLPFQKVAHRITTLDAQPASPNGDVLVMITGDLLIDDEQNPQRFSQVFHLIP-DGNSYYVFNDI 118
BLAST of CK936538 vs. ExPASy Swiss-Prot
Match: NTF2_YEAST (Nuclear transport factor 2 OS=Saccharomyces cerevisiae GN=NTF2 PE=1 SV=2) HSP 1 Score: 120.168 bits (300), Expect = 1.316e-26 Identity = 58/117 (49.57%), Postives = 85/117 (72.65%), Query Frame = 1 Query: 127 MDPDSVAKAFVEHYYTTFDANRTGLANLYQEGSMLTFEGQKIQGSQNIVAKLTSLPFQQCQHSITTVDCQPSGPAGGMLVFVSGNLQLAGEQHALKFSQMFHLMPTPQGSFYVLNDI 477 +D +++A+ F + YY FD +R+ L NLY+ SMLTFE ++QG+++IV KL SLPFQ+ QH ITT+D QP+ P G +LV ++G+L + EQ+ +FSQ+FHL+P S+YV NDI Sbjct: 3 LDFNTLAQNFTQFYYNQFDTDRSQLGNLYRNESMLTFETSQLQGAKDIVEKLVSLPFQKVQHRITTLDAQPASPNGDVLVMITGDLLIDEEQNPQRFSQVFHLIP-DGNSYYVFNDI 118
BLAST of CK936538 vs. ExPASy Swiss-Prot
Match: NTF2_SCHPO (Nuclear transport factor 2 OS=Schizosaccharomyces pombe GN=ntf2 PE=2 SV=2) HSP 1 Score: 120.168 bits (300), Expect = 1.316e-26 Identity = 58/116 (50.00%), Postives = 87/116 (75.00%), Query Frame = 1 Query: 130 DPDSVAKAFVEHYYTTFDANRTGLANLYQEGSMLTFEGQKIQGSQNIVAKLTSLPFQQCQHSITTVDCQPSGPAGGMLVFVSGNLQLAGEQHALKFSQMFHLMPTPQGSFYVLNDI 477 D +++A F + YY TFD++R+ L++LY+E SML+FEG ++QG++ IV KL SLPFQ+ QH I+T+D QP+G G ++V V+G L L EQ A ++SQ+FHL+ G++YVLND+ Sbjct: 3 DYNALATQFTQFYYQTFDSDRSQLSSLYREESMLSFEGAQLQGTKAIVEKLVSLPFQRVQHRISTLDAQPTGTTGSVIVMVTGELLLDEEQMAQRYSQVFHLV-NNNGNYYVLNDL 117
BLAST of CK936538 vs. ExPASy Swiss-Prot
Match: NTF2_DEBHA (Nuclear transport factor 2 OS=Debaryomyces hansenii GN=NTF2 PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.718e-26 Identity = 60/117 (51.28%), Postives = 83/117 (70.94%), Query Frame = 1 Query: 127 MDPDSVAKAFVEHYYTTFDANRTGLANLYQEGSMLTFEGQKIQGSQNIVAKLTSLPFQQCQHSITTVDCQPSGPAGGMLVFVSGNLQLAGEQHALKFSQMFHLMPTPQGSFYVLNDI 477 +D ++VA F YY FD++RT L NLY+E SMLTFE ++QG+++IV KL SLPFQ+ H I+T+D QP P G +LV V+G L + EQ+A ++SQ+FHL+P S+YV NDI Sbjct: 3 VDFNTVASEFCNFYYQQFDSDRTQLGNLYREQSMLTFETSQLQGAKDIVEKLVSLPFQKVAHRISTLDAQPGSPNGDILVMVTGELIIDDEQNAQRYSQVFHLIP-DGNSYYVFNDI 118
BLAST of CK936538 vs. ExPASy Swiss-Prot
Match: NTF2_CANAL (Nuclear transport factor 2 OS=Candida albicans GN=NTF2 PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.455e-25 Identity = 58/117 (49.57%), Postives = 83/117 (70.94%), Query Frame = 1 Query: 127 MDPDSVAKAFVEHYYTTFDANRTGLANLYQEGSMLTFEGQKIQGSQNIVAKLTSLPFQQCQHSITTVDCQPSGPAGGMLVFVSGNLQLAGEQHALKFSQMFHLMPTPQGSFYVLNDI 477 +D ++VA F YY FD++R+ L NLY+ SMLTFE ++QG+++IV KL SLPFQ+ H I+T+D QP+ G +LV V+G L + EQ+A ++SQ+FHL+P GS+YV NDI Sbjct: 3 VDFNAVATEFCNFYYNQFDSDRSQLGNLYRNESMLTFETSQLQGARDIVEKLASLPFQKVAHRISTLDAQPASANGDILVMVTGELLIDEEQNAQRYSQVFHLIP-DNGSYYVFNDI 118 The following BLAST results are available for this feature:
BLAST of CK936538 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 21
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Sequences
The
following sequences are available for this feature:
EST sequence >CK936538 ID=CK936538; Name=CK936538; organism=Citrus sinensis; type=EST; length=780bpback to top |