CK936520

Overview
NameCK936520
Unique NameCK936520
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length823
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2570 contig Csv1_Contig2570:11..833. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK936520 vs. ExPASy Swiss-Prot
Match: TM111_PONAB (Transmembrane protein 111 OS=Pongo abelii GN=TMEM111 PE=2 SV=3)

HSP 1 Score: 199.134 bits (505), Expect = 2.444e-50
Identity = 102/246 (41.46%), Postives = 156/246 (63.41%), Query Frame = 2
Query:   71 DLVLDTAIRDWVLIPLSVVMVLIGILRYFVSKLMRSSQVPDPKIVKEGQVIVRARNLRAGANFISPKSFRARRVYFCNEENGLLHVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMIIPQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGLRGLFSLILGEENATDDTQRMM-QMSGFGF----DPSKSLGAEKDSLDIIQHEWGLPKFEQRAETVLKDL 793
            +L+LD+ IR WV++P+ ++   +G++R++VS L++S +    + V + QV++R+R LR    +I  +SF  R+ YF N E+G     K +         +DP M  DMMK N++ ++P  L   W+N  FSGFV  K+PFPLT RF+ MLQ GI+L T+D S+VSS SWYFLN+FGLR ++SLILG++NA D ++ M  QM+G       D +K+   E ++L++  H+W L   E+  E + KDL
Sbjct:    5 ELLLDSNIRLWVVLPIVIITFFVGMIRHYVSILLQSDKKLTQEQVSDSQVLIRSRVLRENGKYIPKQSFLTRKYYFNNPEDGFFKKTKRKV--VPPSPMTDPTMLTDMMKGNVTNVLPMILIGGWINMTFSGFVTTKVPFPLTLRFKPMLQQGIELLTLDASWVSSASWYFLNVFGLRSIYSLILGQDNAADQSRMMQEQMTGAAMAMPADTNKAFKTEWEALELTDHQWALDDVEE--ELMAKDL 246          
BLAST of CK936520 vs. ExPASy Swiss-Prot
Match: TM111_HUMAN (Transmembrane protein 111 OS=Homo sapiens GN=TMEM111 PE=1 SV=3)

HSP 1 Score: 199.134 bits (505), Expect = 2.444e-50
Identity = 102/246 (41.46%), Postives = 156/246 (63.41%), Query Frame = 2
Query:   71 DLVLDTAIRDWVLIPLSVVMVLIGILRYFVSKLMRSSQVPDPKIVKEGQVIVRARNLRAGANFISPKSFRARRVYFCNEENGLLHVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMIIPQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGLRGLFSLILGEENATDDTQRMM-QMSGFGF----DPSKSLGAEKDSLDIIQHEWGLPKFEQRAETVLKDL 793
            +L+LD+ IR WV++P+ ++   +G++R++VS L++S +    + V + QV++R+R LR    +I  +SF  R+ YF N E+G     K +         +DP M  DMMK N++ ++P  L   W+N  FSGFV  K+PFPLT RF+ MLQ GI+L T+D S+VSS SWYFLN+FGLR ++SLILG++NA D ++ M  QM+G       D +K+   E ++L++  H+W L   E+  E + KDL
Sbjct:    5 ELLLDSNIRLWVVLPIVIITFFVGMIRHYVSILLQSDKKLTQEQVSDSQVLIRSRVLRENGKYIPKQSFLTRKYYFNNPEDGFFKKTKRKV--VPPSPMTDPTMLTDMMKGNVTNVLPMILIGGWINMTFSGFVTTKVPFPLTLRFKPMLQQGIELLTLDASWVSSASWYFLNVFGLRSIYSLILGQDNAADQSRMMQEQMTGAAMAMPADTNKAFKTEWEALELTDHQWALDDVEE--ELMAKDL 246          
BLAST of CK936520 vs. ExPASy Swiss-Prot
Match: TM111_DANRE (Transmembrane protein 111 OS=Danio rerio GN=tmem111 PE=2 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 2.444e-50
Identity = 105/250 (42.00%), Postives = 162/250 (64.80%), Query Frame = 2
Query:   62 MAE-DLVLDTAIRDWVLIPLSVVMVLIGILRYFVSKLMRSSQVPDPKIVKEGQVIVRARNLRAGANFISPKSFRARRVYFCNEENGLLHVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMIIPQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGLRGLFSLILGEENATDDTQRMM-QMSGFGF----DPSKSLGAEKDSLDIIQHEWGLPKFEQRAETVLKDL 793
            MAE +L+LD+ IR WV++P+  +  L+G++R++VS L++S +    + V + QV++R+R LR    +I  +SF  R+ YF N+E+G     K +         +DP+M  DMMK N++ ++P  L   W+N+ FSGFV  K+PFPLT RF+ MLQ GI+L ++D S+VSS SWYFLN+FGLR ++SLILG++N  D ++ M  QMSG       D +K+  AE ++L++  H+W L   E+  + + KDL
Sbjct:    1 MAEPELLLDSNIRLWVVLPIVFITFLVGVIRHYVSILLQSDKKLTLEQVSDSQVLIRSRVLRENGKYIPKQSFLMRKFYFNNQEDGFFKKTKRKV--VPPSPMTDPSMLTDMMKGNVTNVLPMILIGGWINWTFSGFVTTKVPFPLTLRFKPMLQQGIELLSLDASWVSSASWYFLNVFGLRSMYSLILGQDNGADQSRIMQEQMSGAAMAMPADTNKAFKAEWEALELTDHQWALENVEE--DLMSKDL 246          
BLAST of CK936520 vs. ExPASy Swiss-Prot
Match: TM111_BOVIN (Transmembrane protein 111 OS=Bos taurus GN=TMEM111 PE=2 SV=3)

HSP 1 Score: 198.749 bits (504), Expect = 3.192e-50
Identity = 102/246 (41.46%), Postives = 156/246 (63.41%), Query Frame = 2
Query:   71 DLVLDTAIRDWVLIPLSVVMVLIGILRYFVSKLMRSSQVPDPKIVKEGQVIVRARNLRAGANFISPKSFRARRVYFCNEENGLLHVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMIIPQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGLRGLFSLILGEENATDDTQRMM-QMSGFGF----DPSKSLGAEKDSLDIIQHEWGLPKFEQRAETVLKDL 793
            +L+LD+ IR WV++P+ ++   +G++R++VS L++S +    + V + QV++R+R LR    +I  +SF  R+ YF N E+G     K +         +DP M  DMMK N++ ++P  L   W+N  FSGFV  K+PFPLT RF+ MLQ GI+L T+D S+VSS SWYFLN+FGLR ++SLILG++NA D ++ M  QM+G       D +K+   E ++L++  H+W L   E+  E + KDL
Sbjct:    5 ELLLDSNIRLWVVLPIVIITFFVGMIRHYVSILLQSDKKLTQEQVSDSQVLIRSRVLRENGKYIPKQSFLTRKYYFNNPEDGFFKKTKRKV--VPPSPVTDPTMLTDMMKGNVTNVLPMILIGGWINMTFSGFVTTKVPFPLTLRFKPMLQQGIELLTLDASWVSSASWYFLNVFGLRSIYSLILGQDNAADQSRMMQEQMTGAAMAMPADTNKAFKTEWEALELTDHQWALDDVEE--ELMAKDL 246          
BLAST of CK936520 vs. ExPASy Swiss-Prot
Match: TM111_RAT (Transmembrane protein 111 OS=Rattus norvegicus GN=Tmem111 PE=2 SV=3)

HSP 1 Score: 197.978 bits (502), Expect = 5.444e-50
Identity = 101/246 (41.06%), Postives = 156/246 (63.41%), Query Frame = 2
Query:   71 DLVLDTAIRDWVLIPLSVVMVLIGILRYFVSKLMRSSQVPDPKIVKEGQVIVRARNLRAGANFISPKSFRARRVYFCNEENGLLHVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMIIPQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGLRGLFSLILGEENATDDTQRMM-QMSGFGF----DPSKSLGAEKDSLDIIQHEWGLPKFEQRAETVLKDL 793
            +L+LD+ IR WV++P+ ++   +G++R++VS L++S +    + V + QV++R+R LR    +I  +SF  R+ YF N E+G     K +         +DP M  DMMK N++ ++P  L   W+N  FSGFV  K+PFPLT RF+ MLQ GI+L T+D S+VSS SWYFLN+FGLR ++SLILG++NA D ++ M  QM+G       D +K+   E ++L++  H+W L   E+  E + +DL
Sbjct:    5 ELLLDSNIRLWVVLPIVIITFFVGMIRHYVSILLQSDKKLTQEQVSDSQVLIRSRVLRENGKYIPKQSFLTRKYYFNNPEDGFFKKTKRKV--VPPSPMTDPTMLTDMMKGNVTNVLPMILIGGWINMTFSGFVTTKVPFPLTLRFKPMLQQGIELLTLDASWVSSASWYFLNVFGLRSIYSLILGQDNAADQSRMMQEQMTGAAMAMPADTNKAFKTEWEALELTDHQWALDDVEE--ELMARDL 246          
BLAST of CK936520 vs. ExPASy Swiss-Prot
Match: TM111_MOUSE (Transmembrane protein 111 OS=Mus musculus GN=Tmem111 PE=2 SV=3)

HSP 1 Score: 197.978 bits (502), Expect = 5.444e-50
Identity = 101/246 (41.06%), Postives = 156/246 (63.41%), Query Frame = 2
Query:   71 DLVLDTAIRDWVLIPLSVVMVLIGILRYFVSKLMRSSQVPDPKIVKEGQVIVRARNLRAGANFISPKSFRARRVYFCNEENGLLHVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMIIPQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGLRGLFSLILGEENATDDTQRMM-QMSGFGF----DPSKSLGAEKDSLDIIQHEWGLPKFEQRAETVLKDL 793
            +L+LD+ IR WV++P+ ++   +G++R++VS L++S +    + V + QV++R+R LR    +I  +SF  R+ YF N E+G     K +         +DP M  DMMK N++ ++P  L   W+N  FSGFV  K+PFPLT RF+ MLQ GI+L T+D S+VSS SWYFLN+FGLR ++SLILG++NA D ++ M  QM+G       D +K+   E ++L++  H+W L   E+  E + +DL
Sbjct:    5 ELLLDSNIRLWVVLPIVIITFFVGMIRHYVSILLQSDKKLTQEQVSDSQVLIRSRVLRENGKYIPKQSFLTRKYYFNNPEDGFFKKTKRKV--VPPSPMTDPTMLTDMMKGNVTNVLPMILIGGWINMTFSGFVTTKVPFPLTLRFKPMLQQGIELLTLDASWVSSASWYFLNVFGLRSIYSLILGQDNAADQSRMMQEQMTGAAMAMPADTNKAFKTEWEALELTDHQWALDDVEE--ELMARDL 246          
BLAST of CK936520 vs. ExPASy Swiss-Prot
Match: YNY3_SCHPO (UPF0347 membrane protein C1711.03 OS=Schizosaccharomyces pombe GN=SPBC1711.03 PE=2 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 1.216e-41
Identity = 97/251 (38.65%), Postives = 151/251 (60.16%), Query Frame = 2
Query:   68 EDLVLDTAIRDWVLIPLSVVMVLIGILRYFVSKLMRSSQVPDPKI-VKEGQVIVRARNLRAGANFISPKSFRARRVYFCN--EENGLLHVPKGQAQNAQAQMFSDPNMA--MDMMKKNLSMIIPQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGLRGLFSLILGEENATDDTQRMMQMSGF------------GFDPSKSLGAEKDSLDIIQHEWGLPKFEQR 769
            + L+LD A+R+WVL+P+  VM+LIGILR+  + L++SS     K  ++E +++ RA  LRA +N + P+S  AR+ +     +    L      A  A   +  D  +   M+ MK N+ M++PQT+   W+N FFSGF+  K+PFPLT RF+S+ Q+G+    +DV +VSS SWYFLNLFGL+ +++L+LGE NA  +    M M+GF            G D SK + +E +++ I+++E  L   E+R
Sbjct:    2 QKLLLDPALRNWVLLPIMFVMILIGILRHNATILLQSSPKKLSKEEIREQRLLQRAYALRACSNSLLPESIEARKCFLIESLKSGKYLKPVDPNAPKAANPLMDDKTLEGLMESMKGNMLMVVPQTIIMTWINEFFSGFILLKLPFPLTLRFKSIFQSGVATQDLDVQWVSSISWYFLNLFGLKSVYALLLGENNAASNATNEMGMAGFSSAAATAQLIQPGQDISKMMLSEAENVQILKNESLLVDVEKR 252          
BLAST of CK936520 vs. ExPASy Swiss-Prot
Match: TM111_DICDI (Transmembrane protein 111 homolog OS=Dictyostelium discoideum GN=tmem111 PE=3 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 2.008e-36
Identity = 94/253 (37.15%), Postives = 146/253 (57.71%), Query Frame = 2
Query:   74 LVLDTAIRDWVLIPLSVVMVLIGILRYFVSKLMR--SSQVPDPKIVKEGQVIVRARNLRAGANFISPKSFRARRVYFCNE-----ENGLLH--VPKGQAQNAQAQMFS-----DPNMAMDMMKKNLSMIIPQTLTFAWVNFFFSGFVAAKIPF-PLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGLRGLFSLILGEENATDDTQRMMQMSGFGFDPS------KSLGAEKDSLDIIQHEWGLPKFEQR 769
            +VLD  IR+WV+IP+ +V+ ++  L+  +S++M+  S +  D +   + Q I R R L +  N I  KSF  R+ Y C         G+L    P  +  N    MF+     DP+   DM+K N+  +IPQ    +WVN FFSGFVA K+PF PLT RF++ LQ GI++ ++DVSYVSS SWYFL  FG  G+ +++LGE   + D+Q ++Q S     P+      K   +EK+++++I+++  +   E R
Sbjct:    6 IVLDVEIRNWVVIPILIVLFIVSALKLNISRIMQINSGKPQDVEKTMQMQTINRVRRLVSFYNRIPQKSFFIRKAYLCGTTGSKTNKGILSSIAPTQEDSNPMNMMFANSMFTDPSGITDMLKGNIMHLIPQVTMMSWVNHFFSGFVACKLPFFPLTIRFKTFLQRGIEMGSLDVSYVSSLSWYFLCWFGSEGINAILLGENMVSADSQ-LLQSSIEPGPPTQQTPIHKIYASEKENIEMIRYDSLMTNIEDR 257          
BLAST of CK936520 vs. ExPASy Swiss-Prot
Match: EMC3_YEAS6 (ER membrane protein complex subunit 3 OS=Saccharomyces cerevisiae (strain AWRI1631) GN=AIM27 PE=3 SV=2)

HSP 1 Score: 137.887 bits (346), Expect = 6.686e-32
Identity = 87/253 (34.39%), Postives = 138/253 (54.55%), Query Frame = 2
Query:   74 LVLDTAIRDWVLIPLSVVMVLIGILRYFVSKLMRSSQVPD--PKI-VKEGQVIVRARNLRAGANFISPKSFRARRVYFCNEENGLLHVPKGQAQNAQA-----QMFSDPNMA---MDMMKKNLSMIIPQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGLRGLFSLILGEENATDDTQRMMQMSGFG----------FDPSKSLGAEKDSLDIIQHEWGLPKFEQR 769
            ++LD  ++ WVL+P+S+VMVL G+L+ ++  L+  S   +  P++ + E Q +  A+ L      +S  +F A++ +   +     H+ K + Q           F+DPNM+   M+M K N++  IPQT+   WVN FF+GF+  ++PFPLT +F+ MLQ GI    +DV +VSS SWYF+++ GL  +++LI       +D Q M   +G G              K++ A  + L IIQHE  L   EQR
Sbjct:    1 MLLDDQLKYWVLLPISIVMVLTGVLKQYIMTLITGSSANEAQPRVKLTEWQYLQWAQLLIGNGGNLSSDAFAAKKEFLVKDLTEERHLAKAKQQGGSQAGEVPNPFNDPNMSNAMMNMAKGNMASFIPQTIIMWWVNHFFAGFILMQLPFPLTAKFKEMLQTGIICQDLDVRWVSSISWYFISVLGLNPVYNLI-----GLND-QDMGIQAGIGGPQGPQGPPQSQVDKAMHAMANDLTIIQHETCLDNVEQR 247          
BLAST of CK936520 vs. ExPASy Swiss-Prot
Match: EMC3_YEAS1 (ER membrane protein complex subunit 3 OS=Saccharomyces cerevisiae (strain RM11-1a) GN=AIM27 PE=3 SV=2)

HSP 1 Score: 137.887 bits (346), Expect = 6.686e-32
Identity = 87/253 (34.39%), Postives = 138/253 (54.55%), Query Frame = 2
Query:   74 LVLDTAIRDWVLIPLSVVMVLIGILRYFVSKLMRSSQVPD--PKI-VKEGQVIVRARNLRAGANFISPKSFRARRVYFCNEENGLLHVPKGQAQNAQA-----QMFSDPNMA---MDMMKKNLSMIIPQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGLRGLFSLILGEENATDDTQRMMQMSGFG----------FDPSKSLGAEKDSLDIIQHEWGLPKFEQR 769
            ++LD  ++ WVL+P+S+VMVL G+L+ ++  L+  S   +  P++ + E Q +  A+ L      +S  +F A++ +   +     H+ K + Q           F+DPNM+   M+M K N++  IPQT+   WVN FF+GF+  ++PFPLT +F+ MLQ GI    +DV +VSS SWYF+++ GL  +++LI       +D Q M   +G G              K++ A  + L IIQHE  L   EQR
Sbjct:    1 MLLDDQLKYWVLLPISIVMVLTGVLKQYIMTLITGSSANEAQPRVKLTEWQYLQWAQLLIGNGGNLSSDAFAAKKEFLVKDLTEERHLAKAKQQGGSQAGEVPNPFNDPNMSNAMMNMAKGNMASFIPQTIIMWWVNHFFAGFILMQLPFPLTAKFKEMLQTGIICQDLDVRWVSSISWYFISVLGLNPVYNLI-----GLND-QDMGIQAGIGGPQGPQGPPQSQVDKAMHAMANDLTIIQHETCLDNVEQR 247          
The following BLAST results are available for this feature:
BLAST of CK936520 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
TM111_PONAB2.444e-5041.46Transmembrane protein 111 OS=Pongo abelii GN=TMEM1... [more]
TM111_HUMAN2.444e-5041.46Transmembrane protein 111 OS=Homo sapiens GN=TMEM1... [more]
TM111_DANRE2.444e-5042.00Transmembrane protein 111 OS=Danio rerio GN=tmem11... [more]
TM111_BOVIN3.192e-5041.46Transmembrane protein 111 OS=Bos taurus GN=TMEM111... [more]
TM111_RAT5.444e-5041.06Transmembrane protein 111 OS=Rattus norvegicus GN=... [more]
TM111_MOUSE5.444e-5041.06Transmembrane protein 111 OS=Mus musculus GN=Tmem1... [more]
YNY3_SCHPO1.216e-4138.65UPF0347 membrane protein C1711.03 OS=Schizosacchar... [more]
TM111_DICDI2.008e-3637.15Transmembrane protein 111 homolog OS=Dictyostelium... [more]
EMC3_YEAS66.686e-3234.39ER membrane protein complex subunit 3 OS=Saccharom... [more]
EMC3_YEAS16.686e-3234.39ER membrane protein complex subunit 3 OS=Saccharom... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004521_D10 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0001_IVF_D10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK936520 ID=CK936520; Name=CK936520; organism=Citrus sinensis; type=EST; length=823bp
GGGAAAACGAANNNAATCGAAATCGAGCACCCNNNGGCACAGGCACAGGT
ACAGAGCATCAATGGCGGAAGATCTGGTGCTTGACACGGCGATCAGAGAC
TGGGTGCTGATACCGCTGTCAGTTGTGATGGTGCTTATTGGAATTCTCCG
TTACTTCGTCTCTAAGCTTATGCGCTCCTCTCAAGTGCCCGATCCTAAAA
TCGTTAAAGAAGGACAAGTGATTGTTAGGGCGCGGAATTTGCGTGCTGGC
GCTAATTTTATCTCTCCAAAGTCTTTTCGCGCTCGCAGAGTTTATTTCTG
TAACGAGGAAAATGGATTGTTGCATGTGCCAAAGGGTCAGGCACAAAATG
CGCAAGCGCAAATGTTTTCCGATCCTAACATGGCAATGGACATGATGAAG
AAAAATCTTTCAATGATCATACCCCAGACCCTTACTTTTGCTTGGGTCAA
CTTTTTCTTCTCTGGGTTTGTTGCAGCCAAGATACCATTCCCACTGACTC
AGAGGTTCAGGTCAATGTTACAAAATGGGATTGACTTGAGCACTGTTGAT
GTAAGCTATGTCAGTAGTCGTTCATGGTACTTCCTCAATTTGTTTGGACT
GAGGGGTTTATTTAGCCTCATTCTGGGGGAAGAAAATGCTACTGATGATA
CTCAGCGTATGATGCAAATGAGTGGGTTTGGCTTTGACCCAAGCAAGAGC
TTGGGTGCTGAGAAAGACAGTCTGGACATAATTCAGCATGAATGGGGCTT
ACCAAAATTTGAGCAGCGTGCTGAAACAGTATTGAAAGATCTTGTCGGTT
GAACAATGGTGATCTGTTGTTAT
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