CK936491

Overview
NameCK936491
Unique NameCK936491
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length818
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2911 contig Csv1_Contig2911:1..801. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK936491 vs. ExPASy Swiss-Prot
Match: EF103_ARATH (Ethylene-responsive transcription factor 6 OS=Arabidopsis thaliana GN=ERF6 PE=2 SV=2)

HSP 1 Score: 117.472 bits (293), Expect = 9.234e-26
Identity = 91/259 (35.14%), Postives = 112/259 (43.24%), Query Frame = 3
Query:   78 MATPIEKSALEFIEQHLFGENSPIAGFXXXXXXXXXXXXXXXXXXXXXXXFFNDAVFFD--------YESKPQIIDLVTPQPTNTCSELTNDFFEFDIRPQIQSQPSNCSSEFEXXXXXXXXXXXXXXXXXXXXXXVPKKAEGHHFTN-----RXXXXXXXXXXXXHYRGVRRRPWGKYAAEIRDPTRRGVRVWLGTFXXXXXXXXXXXXXXFQLRGSKAILNFPLEAGKCDSNAAVARECDSSAEAGACETKRKRDCE 815
            MATP E SAL  I+++L  E SP+                          + ND   FD        +E+KP+IIDLVTP+P         + F+FD++ +I S+ SN S  F+                       P + +   F                    HYRGVR RPWGK+AAEIRDPTRRG RVWLGTF              F+LRGSKAILNFPLE  K +  A   R             KRKRD E
Sbjct:    1 MATPNEVSALFLIKKYLLDELSPLP------------------TTATTNRWMNDFTSFDQTGFEFSEFETKPEIIDLVTPKP---------EIFDFDVKSEIPSE-SNDSFTFQSNPPRVTVQSNRKPPLKIAP---PNRTKWIQFATGNPKPELPVPVVAAEEKRHYRGVRMRPWGKFAAEIRDPTRRGTRVWLGTFETAIEAARAYDKEAFRLRGSKAILNFPLEVDKWNPRAEDGR---------GLYNKRKRDGE 219          
BLAST of CK936491 vs. ExPASy Swiss-Prot
Match: EF102_ARATH (Ethylene-responsive transcription factor 5 OS=Arabidopsis thaliana GN=ERF5 PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.129e-23
Identity = 89/252 (35.32%), Postives = 107/252 (42.46%), Query Frame = 3
Query:   78 MATPIEKSALEFIEQHLFGENSPIAGFXXXXXXXXXXXXXXXXXXXXXXXFFNDAV----FFDYESKPQIIDLVTPQPTNTCSELTNDFFEFDIRPQIQS---QPSNCS-SEFEXXXXXXXXXXXXXXXXXXXXXXVPKKAEGHHFTNRXXXXXXXXXXXXHYRGVRRRPWGKYAAEIRDPTRRGVRVWLGTFXXXXXXXXXXXXXXFQLRGSKAILNFPLEAGKCDSNAAVARECDSSAEAGACETKRKRD 809
            MATP E SAL FIE+HL  E SP+A                           + +     F +   KP+IIDL TP+      E  +  FEFD    +     +PSN + ++FE                      +   AE    T              HYRGVR+RPWGK+AAEIRDP +RG RVWLGTF              F+LRGSKAILNFPLE GK                A   E KRKRD
Sbjct:    1 MATPNEVSALWFIEKHLLDEASPVATDPWMKHESSSATESSSDSSSIIFGSSSSSFAPIDFSESVCKPEIIDLDTPRSM----EFLSIPFEFDSEVSVSDFDFKPSNQNQNQFEPELKSQIRKPPLKISLPAKTEWIQFAAEN---TKPEVTKPVSEEEKKHYRGVRQRPWGKFAAEIRDPNKRGSRVWLGTFDTAIEAARAYDEAAFRLRGSKAILNFPLEVGKW------------KPRADEGEKKRKRD 233          
BLAST of CK936491 vs. ExPASy Swiss-Prot
Match: EF105_ARATH (Ethylene-responsive transcription factor ERF105 OS=Arabidopsis thaliana GN=ERF105 PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 5.797e-20
Identity = 46/64 (71.88%), Postives = 49/64 (76.56%), Query Frame = 3
Query:  537 HYRGVRRRPWGKYAAEIRDPTRRGVRVWLGTFXXXXXXXXXXXXXXFQLRGSKAILNFPLEAGK 728
            HYRGVRRRPWGKYAAEIRDP ++GVRVWLGTF              F+LRGSKAILNFPLEAGK
Sbjct:   71 HYRGVRRRPWGKYAAEIRDPNKKGVRVWLGTFDTAMEAARGYDKAAFKLRGSKAILNFPLEAGK 134          
BLAST of CK936491 vs. ExPASy Swiss-Prot
Match: EF107_ARATH (Ethylene-responsive transcription factor ERF107 OS=Arabidopsis thaliana GN=ERF107 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.865e-18
Identity = 45/91 (49.45%), Postives = 55/91 (60.44%), Query Frame = 3
Query:  537 HYRGVRRRPWGKYAAEIRDPTRRGVRVWLGTFXXXXXXXXXXXXXXFQLRGSKAILNFPLEAGKCDSNAAVARECDSSAEAGACETKRKRD 809
            HYRGVRRRPWGK+AAEIRDP ++G R+WLGTF              F+LRG KA+LNFPL+AGK D            A   +C  +R+ D
Sbjct:  106 HYRGVRRRPWGKFAAEIRDPAKKGSRIWLGTFESDIDAARAYDYAAFKLRGRKAVLNFPLDAGKYD------------APVNSCRKRRRTD 184          
BLAST of CK936491 vs. ExPASy Swiss-Prot
Match: EF106_ARATH (Ethylene-responsive transcription factor ERF106 OS=Arabidopsis thaliana GN=ERF106 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.181e-18
Identity = 42/74 (56.76%), Postives = 52/74 (70.27%), Query Frame = 3
Query:  537 HYRGVRRRPWGKYAAEIRDPTRRGVRVWLGTFXXXXXXXXXXXXXXFQLRGSKAILNFPLEAGKCDSNAAVARE 758
            HYRGVRRRPWGK+AAEIRDP ++G R+WLGTF              F+LRG KA+LNFPL+AGK ++ A   R+
Sbjct:  109 HYRGVRRRPWGKFAAEIRDPAKKGSRIWLGTFESDVDAARAYDCAAFKLRGRKAVLNFPLDAGKYEAPANSGRK 182          
BLAST of CK936491 vs. ExPASy Swiss-Prot
Match: EF104_ARATH (Ethylene-responsive transcription factor ERF104 OS=Arabidopsis thaliana GN=ERF104 PE=1 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 3.517e-17
Identity = 46/91 (50.55%), Postives = 52/91 (57.14%), Query Frame = 3
Query:  537 HYRGVRRRPWGKYAAEIRDPTRRGVRVWLGTFXXXXXXXXXXXXXXFQLRGSKAILNFPLEAGKCDSNAAVARECDSSAEAGACETKRKRD 809
            HYRGVRRRPWGKYAAEIRDP ++G R+WLGT+              FQLRG KAILNFPL+          +  C      G    KRKRD
Sbjct:   87 HYRGVRRRPWGKYAAEIRDPNKKGCRIWLGTYDTAVEAGRAYDQAAFQLRGRKAILNFPLDV------RVTSETCSGEGVIGL--GKRKRD 169          
BLAST of CK936491 vs. ExPASy Swiss-Prot
Match: ERF5_TOBAC (Ethylene-responsive transcription factor 5 OS=Nicotiana tabacum GN=ERF5 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 7.835e-17
Identity = 40/61 (65.57%), Postives = 45/61 (73.77%), Query Frame = 3
Query:  537 HYRGVRRRPWGKYAAEIRDPTRRGVRVWLGTFXXXXXXXXXXXXXXFQLRGSKAILNFPLE 719
            HYRGVR+RPWGK+AAEIRDP R+G RVWLGTF              F+LRGSKAI+NFPLE
Sbjct:  144 HYRGVRQRPWGKFAAEIRDPNRKGTRVWLGTFDTAIEAAKAYDRAAFKLRGSKAIVNFPLE 204          
BLAST of CK936491 vs. ExPASy Swiss-Prot
Match: EF101_ARATH (Ethylene-responsive transcription factor 2 OS=Arabidopsis thaliana GN=ERF2 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.336e-16
Identity = 45/104 (43.27%), Postives = 61/104 (58.65%), Query Frame = 3
Query:  537 HYRGVRRRPWGKYAAEIRDPTRRGVRVWLGTFXXXXXXXXXXXXXXFQLRGSKAILNFPL--EAGKCDSNAAVARECDSSAEAGACET--------KRKRDCES 818
            HYRGVR+RPWGK+AAEIRDP + G RVWLGTF              F++RGS+A+LNFPL   +G+ D     ++   SS+ + +  T        KR+R  E+
Sbjct:  116 HYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDIAAFRMRGSRALLNFPLRVNSGEPDPVRITSKRSSSSSSSSSSSTSSSENGKLKRRRKAEN 219          
BLAST of CK936491 vs. ExPASy Swiss-Prot
Match: ERF5_NICSY (Ethylene-responsive transcription factor 5 OS=Nicotiana sylvestris GN=ERF5 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.745e-16
Identity = 39/61 (63.93%), Postives = 45/61 (73.77%), Query Frame = 3
Query:  537 HYRGVRRRPWGKYAAEIRDPTRRGVRVWLGTFXXXXXXXXXXXXXXFQLRGSKAILNFPLE 719
            HYRGVR+RPWGK+AAEIRDP R+G RVWLGTF              ++LRGSKAI+NFPLE
Sbjct:  137 HYRGVRQRPWGKFAAEIRDPNRKGTRVWLGTFDTAIEAAKAYDRAAYKLRGSKAIVNFPLE 197          
BLAST of CK936491 vs. ExPASy Swiss-Prot
Match: EF100_ARATH (Ethylene-responsive transcription factor 1A OS=Arabidopsis thaliana GN=ERF1A PE=1 SV=2)

HSP 1 Score: 83.1889 bits (204), Expect = 1.930e-15
Identity = 42/92 (45.65%), Postives = 54/92 (58.70%), Query Frame = 3
Query:  537 HYRGVRRRPWGKYAAEIRDPTRRGVRVWLGTFXXXXXXXXXXXXXXFQLRGSKAILNFPLEAGKCDSNAAVAR----ECDSSAEAGACETKR 800
            HYRGVR+RPWGK+AAEIRDP + G RVWLGTF              F++RGS+A+LNFPL     + +    +       SS E GA + +R
Sbjct:  147 HYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDRAAFRMRGSRALLNFPLRVNSGEPDPVRIKSKRSSFSSSNENGAPKKRR 238          
The following BLAST results are available for this feature:
BLAST of CK936491 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 38
Match NameE-valueIdentityDescription
EF103_ARATH9.234e-2635.14Ethylene-responsive transcription factor 6 OS=Arab... [more]
EF102_ARATH1.129e-2335.32Ethylene-responsive transcription factor 5 OS=Arab... [more]
EF105_ARATH5.797e-2071.88Ethylene-responsive transcription factor ERF105 OS... [more]
EF107_ARATH1.865e-1849.45Ethylene-responsive transcription factor ERF107 OS... [more]
EF106_ARATH3.181e-1856.76Ethylene-responsive transcription factor ERF106 OS... [more]
EF104_ARATH3.517e-1750.55Ethylene-responsive transcription factor ERF104 OS... [more]
ERF5_TOBAC7.835e-1765.57Ethylene-responsive transcription factor 5 OS=Nico... [more]
EF101_ARATH1.336e-1643.27Ethylene-responsive transcription factor 2 OS=Arab... [more]
ERF5_NICSY1.745e-1663.93Ethylene-responsive transcription factor 5 OS=Nico... [more]
EF100_ARATH1.930e-1545.65Ethylene-responsive transcription factor 1A OS=Ara... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004521_G05 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0001_IVF_G05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK936491 ID=CK936491; Name=CK936491; organism=Citrus sinensis; type=EST; length=818bp
GCGGGGAGCANNNTCAAAACTCTTTAATATTTNNNAGATTCAAAAACTCT
ATAAGGGACACAGCTTGCTTAGTTGCCATGGCTACACCAATTGAAAAATC
AGCGCTCGAGTTTATCGAGCAACATTTGTTCGGCGAAAATTCTCCTATTG
CGGGATTTAGTTCGAGTTTGTCGAGCGACACTTGCTCGCAATCGCAAACG
TCCAGCTCTGCATCTTCAGATCGTAGTTTCTTCAACGATGCCGTTTTCTT
CGACTATGAATCCAAACCTCAAATCATTGATCTTGTTACACCGCAACCCA
CTAATACTTGCTCTGAATTGACTAACGATTTCTTTGAATTTGACATTAGA
CCTCAAATCCAATCGCAACCGAGCAATTGTAGCTCGGAATTCGAACCCAA
GCCTAAAATATCACCAAATTCATCCTCTCAATCGTCTCGCAAACCGTCGC
TGAAAATCTCAGTGCCTAAGAAAGCCGAAGGTCATCATTTCACCAACCGG
AAAAGCAAGGCCAAACCTGAGAGTTCGGAAGAAAAGCATTACAGAGGAGT
TCGACGGAGGCCGTGGGGAAAGTACGCGGCCGAGATCCGAGATCCTACCC
GGAGAGGCGTACGTGTCTGGCTGGGGACATTTGACACGGCCACTGAAGCA
GCTAGGGCGTACGACCGTGCCGCTTTCCAGCTGCGCGGCTCGAAAGCGAT
CCTCAACTTTCCTCTTGAAGCCGGCAAGTGCGACTCAAACGCTGCGGTGG
CTAGAGAGTGTGACTCGAGCGCCGAGGCTGGCGCTTGTGAAACGAAACGG
AAGAGGGACTGTGAGAGC
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