EL492590

Overview
NameEL492590
Unique NameEL492590
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length181
Libraries
Library NameType
Citrus sinensis flesh cDNA-AFLP Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10200 contig Csv1_Contig10200:2429..2612. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of EL492590 vs. ExPASy Swiss-Prot
Match: SUSY_VICFA (Sucrose synthase OS=Vicia faba GN=SUCS PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 2.537e-11
Identity = 30/30 (100.00%), Postives = 30/30 (100.00%), Query Frame = 2 
Query:   23 VYGFWKHVSNLDRLESRRYLEMFYALKYRK 112
            VYGFWKHVSNLDRLESRRYLEMFYALKYRK
Sbjct:  766 VYGFWKHVSNLDRLESRRYLEMFYALKYRK 795
[Close]
BLAST of EL492590 vs. ExPASy Swiss-Prot
Match: SUSY_MEDSA (Sucrose synthase OS=Medicago sativa PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 2.537e-11
Identity = 30/30 (100.00%), Postives = 30/30 (100.00%), Query Frame = 2 
Query:   23 VYGFWKHVSNLDRLESRRYLEMFYALKYRK 112
            VYGFWKHVSNLDRLESRRYLEMFYALKYRK
Sbjct:  766 VYGFWKHVSNLDRLESRRYLEMFYALKYRK 795
The following BLAST results are available for this feature:
BLAST of EL492590 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
SUSY_VICFA2.537e-11100.00Sucrose synthase OS=Vicia faba GN=SUCS PE=2 SV=1[more]
SUSY_MEDSA2.537e-11100.00Sucrose synthase OS=Medicago sativa PE=2 SV=1[more]
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Properties
Property NameValue
Genbank descriptionC3880 Citrus sinensis flesh cDNA-AFLP Library Citrus sinensis cDNA clone ClC3880, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EL492590 ID=EL492590; Name=EL492590; organism=Citrus sinensis; type=EST; length=181bp
GCCTTCTGACCCTGCACTGGCAGTCTATGGGTTCTGGAAACATGTATCTA
ACCTTGATCGGCTTGAGAGCCGTCGATACCTTGAAATGTTTTATGCTCTC
AAGTACCGTAAGTCTGGCTGAATCTGTTCCTCTGGCTGTGGAGTAAATGG
ACATTGAGGAAGCTCTCAGGGTGGTTGGCCC
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