CX675125
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX675125 vs. ExPASy Swiss-Prot
Match: SPTC1_MOUSE (Serine palmitoyltransferase 1 OS=Mus musculus GN=Sptlc1 PE=2 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 1.345e-35 Identity = 75/147 (51.02%), Postives = 103/147 (70.07%), Query Frame = 3 Query: 396 KSYKPPKRP-LTKKEIDELCDEWVPESLIPPIIEEMQCEPPVLESAAGPHTII-SGKEVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFCKKGDLIVAD 830 K+YK +R LT KE +EL +EW PE L+PP+ + + S H I+ +GKE VNFAS N+LGL+ + ++ + S+L+KYGVG+CGPRGFYGT DVHLD E R+AKF+ T ++I+YSYG ST+ SAIP + K+GD+I D Sbjct: 42 KTYKLQERSDLTAKEKEELIEEWQPEPLVPPVSKNHPALNYNIVSGPPTHNIVVNGKECVNFASFNFLGLLANPRVKAAAFSSLKKYGVGTCGPRGFYGTFDVHLDLEERLAKFMKTEEAIIYSYGFSTVASAIPAYSKRGDIIFVD 188
BLAST of CX675125 vs. ExPASy Swiss-Prot
Match: SPTC1_CRIGR (Serine palmitoyltransferase 1 OS=Cricetulus griseus GN=SPTLC1 PE=2 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 2.997e-35 Identity = 73/147 (49.66%), Postives = 103/147 (70.07%), Query Frame = 3 Query: 396 KSYKPPKRP-LTKKEIDELCDEWVPESLIPPIIEEMQCEPPVLESAAGPHTII-SGKEVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFCKKGDLIVAD 830 K+YK +R LT KE +EL +EW PE L+PP+ + + S H I+ +GKE VNFAS N+LGL+ + ++ + ++L+KYGVG+CGPRGFYGT DVHLD E R+AKF+ T ++I+YSYG ST+ SAIP + K+GD++ D Sbjct: 42 KTYKLQERSDLTAKEKEELIEEWQPEPLVPPVSKNHPALNYNIVSGPPTHNIVVNGKECVNFASFNFLGLLANPRVKAAALASLKKYGVGTCGPRGFYGTFDVHLDLEERLAKFMRTEEAIIYSYGFSTIASAIPAYSKRGDIVFVD 188
BLAST of CX675125 vs. ExPASy Swiss-Prot
Match: SPTC1_BOVIN (Serine palmitoyltransferase 1 OS=Bos taurus GN=SPTLC1 PE=2 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 3.914e-35 Identity = 72/148 (48.65%), Postives = 105/148 (70.95%), Query Frame = 3 Query: 396 KSYKPPKRP-LTKKEIDELCDEWVPESLIPPIIEEMQCEPPVLESAAGPHTII-SGKEVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFCKKGDLIVADE 833 K+YK +R LT KE +EL +EW PE L+PP+ ++ + S H I+ +GKE +NFAS N+LGL+ + +L + ++L+KYGVG+CGPRGFYGT DVHLD E R+AKF+ T ++I+YSYG +T+ SAIP + K+GD++ D+ Sbjct: 42 KTYKLQERSDLTLKEKEELIEEWQPEPLVPPVSKDHPALNYNIVSGPPSHNIVVNGKECINFASFNFLGLLDNPRLKAAALASLKKYGVGTCGPRGFYGTFDVHLDLEDRLAKFMKTEEAIIYSYGFATIASAIPAYSKRGDIVFVDK 189
BLAST of CX675125 vs. ExPASy Swiss-Prot
Match: SPTC1_HUMAN (Serine palmitoyltransferase 1 OS=Homo sapiens GN=SPTLC1 PE=1 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 5.112e-35 Identity = 71/147 (48.30%), Postives = 105/147 (71.43%), Query Frame = 3 Query: 396 KSYKPPKRP-LTKKEIDELCDEWVPESLIPPIIEEMQCEPPVLESAAGPH-TIISGKEVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFCKKGDLIVAD 830 K+YK +R LT KE +EL +EW PE L+PP+ ++ + S H T+++GKE +NFAS N+LGL+ + ++ + ++L+KYGVG+CGPRGFYGT DVHLD E R+AKF+ T ++I+YSYG +T+ SAIP + K+GD++ D Sbjct: 42 KTYKLQERSDLTVKEKEELIEEWQPEPLVPPVPKDHPALNYNIVSGPPSHKTVVNGKECINFASFNFLGLLDNPRVKAAALASLKKYGVGTCGPRGFYGTFDVHLDLEDRLAKFMKTEEAIIYSYGFATIASAIPAYSKRGDIVFVD 188
BLAST of CX675125 vs. ExPASy Swiss-Prot
Match: SPTC1_MACFA (Serine palmitoyltransferase 1 OS=Macaca fascicularis GN=SPTLC1 PE=2 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 1.943e-34 Identity = 71/147 (48.30%), Postives = 104/147 (70.75%), Query Frame = 3 Query: 396 KSYKPPKRP-LTKKEIDELCDEWVPESLIPPIIEEMQCEPPVLESAAGPHTII-SGKEVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFCKKGDLIVAD 830 K+YK +R LT KE +EL +EW PE L+PP+ ++ + S H I+ +GKE +NFAS N+LGL+ + ++ + ++L+KYGVG+CGPRGFYGT DVHLD E R+AKF+ T ++I+YSYG +T+ SAIP + K+GD++ D Sbjct: 42 KTYKLQERSDLTVKEKEELIEEWQPEPLVPPVPKDHPALNYNIVSGPPSHKIVVNGKECINFASFNFLGLLDNPRVKAAALASLKKYGVGTCGPRGFYGTFDVHLDLEDRLAKFMKTEEAIIYSYGFATIASAIPAYSKRGDIVFVD 188
BLAST of CX675125 vs. ExPASy Swiss-Prot
Match: SPTC1_PONAB (Serine palmitoyltransferase 1 OS=Pongo abelii GN=SPTLC1 PE=2 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 2.805e-33 Identity = 70/147 (47.62%), Postives = 103/147 (70.07%), Query Frame = 3 Query: 396 KSYKPPKRP-LTKKEIDELCDEWVPESLIPPIIEEMQCEPPVLESAAGPHTII-SGKEVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFCKKGDLIVAD 830 K+YK +R LT KE +EL +EW PE L+P + ++ + S H I+ +GKE +NFAS N+LGL+ + ++ + ++L+KYGVG+CGPRGFYGT DVHLD E R+AKF+ T ++I+YSYG +T+ SAIP + K+GD++ D Sbjct: 42 KTYKLQERSDLTVKEKEELIEEWQPEPLVPLVPKDHPALNYNIVSGPPSHKIVVNGKECINFASFNFLGLLDNPRVKAAALASLKKYGVGTCGPRGFYGTFDVHLDLEDRLAKFMKTEEAIIYSYGFATIASAIPAYSKRGDIVFVD 188
BLAST of CX675125 vs. ExPASy Swiss-Prot
Match: SPTC1_DICDI (Serine palmitoyltransferase 1 OS=Dictyostelium discoideum GN=sptA PE=3 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 4.051e-32 Identity = 70/153 (45.75%), Postives = 100/153 (65.36%), Query Frame = 3 Query: 390 SQKSYKPPKRP-LTKKEIDELCDEWVPESLIPPI--IEEMQCEPPVLESAAGPHTIISGKEVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFCKKGDLIVADEGV 839 +++ +KP + LTK E DEL EW P L P +E + +++ + G H I+ K+ +N A +NYLGLI + ++ + +A+ KYGVGSCGPRGFYGTIDVHLD E + A F+ TP+++LYS +T+ SAIP F K GD+I+ D GV Sbjct: 41 TKRPFKPRQNDTLTKAEEDELIREWSPIPLTPKSNPLEVLNQTELIIQESEGTHVTINNKKYLNLARSNYLGLINNPEINKISENAIRKYGVGSCGPRGFYGTIDVHLDLEKKTASFMKTPEAVLYSSAYATISSAIPSFSKIGDIIIVDRGV 193
BLAST of CX675125 vs. ExPASy Swiss-Prot
Match: LCB1_SCHPO (Serine palmitoyltransferase 1 OS=Schizosaccharomyces pombe GN=lcb1 PE=2 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 1.262e-25 Identity = 59/143 (41.26%), Postives = 90/143 (62.94%), Query Frame = 3 Query: 426 TKKEIDELCDEWVPESLIPPI--IEEMQCEP-PVLESAAGPHTIISGKEVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFCKKGDLIVADEGVHW 845 T+KEI+EL D+W PE L+ + +E+++ + PVLES +I G+ + NFAS N+L L ++ + E + L + G+G+CGP GFYGT D HL E IA F+G +I+Y+ T+ S IP F K+GD++V DE ++ Sbjct: 80 TEKEINELVDDWKPEPLVAELTDVEKLELKSIPVLESVHLHTKLIDGRPITNFASFNFLDLAENKHITECAVATLRECGLGACGPPGFYGTQDKHLRLEKDIASFIGVERAIVYAQSFQTISSVIPAFSKRGDILVVDEACNF 222
BLAST of CX675125 vs. ExPASy Swiss-Prot
Match: LCB1_YEAST (Serine palmitoyltransferase 1 OS=Saccharomyces cerevisiae GN=LCB1 PE=1 SV=2) HSP 1 Score: 103.219 bits (256), Expect = 1.886e-21 Identity = 60/161 (37.27%), Postives = 83/161 (51.55%), Query Frame = 3 Query: 393 QKSYKPPKRPLTKKEIDELCDEWVPESLIPPIIEEMQC-----EPPVLESAAGPHTIISGKE-------VVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFCKKGDLIVADEGV 839 +KS + K L+ +EID L ++W PE L+ P + Q P +E H I+ V N AS N+L L E + E + ++ YGVG+CGP GFYG DVH E +A+F GT S+LY S +P F K+GD+IVAD+ V Sbjct: 78 KKSLQAQKPNLSPQEIDALIEDWEPEPLVDPSATDEQSWRVAKTPVTMEMPIQNHITITRNNLQEKYTNVFNLASNNFLQLSATEPVKEVVKTTIKNYGVGACGPAGFYGNQDVHYTLEYDLAQFFGTQGSVLYGQDFCAAPSVLPAFTKRGDVIVADDQV 238
BLAST of CX675125 vs. ExPASy Swiss-Prot
Match: BIKB_THEP3 (Putative 8-amino-7-oxononanoate synthase/2-amino-3-ketobutyrate coenzyme A ligase OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=Teth39_0287 PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 4.069e-16 Identity = 42/109 (38.53%), Postives = 64/109 (58.72%), Query Frame = 3 Query: 516 VLESAAGPHTIISGKEVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFCKKGDLIVADEGVH 842 VLES +GP +II GKEV+N +S NYLGL H +L ++ A+EK+GVG+ R G + +H + E ++A+F + + G + I KGD+I++DE H Sbjct: 28 VLESPSGPRSIIDGKEVINLSSNNYLGLANHPRLKKAAIEAIEKWGVGAGAVRTIIGNMTIHEELERKLAEFKREEAVLTFQSGFTANMGVIQAVVDKGDVIISDELNH 136 The following BLAST results are available for this feature:
BLAST of CX675125 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 50
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Sequences
The
following sequences are available for this feature:
EST sequence >CX675125 ID=CX675125; Name=CX675125; organism=Citrus sinensis; type=EST; length=845bpback to top |