EY665808

Overview
NameEY665808
Unique NameEY665808
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length878
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665808 vs. ExPASy Swiss-Prot
Match: FRS6_ARATH (Protein FAR1-RELATED SEQUENCE 6 OS=Arabidopsis thaliana GN=FRS6 PE=2 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 4.044e-30
Identity = 65/167 (38.92%), Postives = 104/167 (62.28%), Query Frame = 1
Query:   91 NGNVDAYGAFGNIVNTSNHLNLIPGDARAVQSFFCRLQLTDPNFFNVMDLNEKGCLINLFWTDTRSRVAYRYFGDVVLIDTTCLIDRYDVPLLSFFGVNHYGQSPLLGCGLLASESIESYT*VVYGASYMYVRALSPNKSSLTNVQSLQIAVGEAFPTNLSMLFLRH 591
            N N      F N   + + LNL  GD+ A+ ++FCR+QLT+PNFF +MD+N++G L N+FW D  S+V+  YFGDV+ ID++ +  ++++PL++F GVNH+G++ LL CG LA E++ESY  ++    ++ V   SP        + L+ A+ + FP +     L H
Sbjct:  222 NPNSTLNKKFQNSTGSPDLLNLKRGDSAAIYNYFCRMQLTNPNFFYLMDVNDEGQLRNVFWADAFSKVSCSYFGDVIFIDSSYISGKFEIPLVTFTGVNHHGKTTLLSCGFLAGETMESYHWLL--KVWLSVMKRSPQTIVTDRCKPLEAAISQVFPRSHQRFSLTH 386          
BLAST of EY665808 vs. ExPASy Swiss-Prot
Match: FRS8_ARATH (Protein FAR1-RELATED SEQUENCE 8 OS=Arabidopsis thaliana GN=FRS8 PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.301e-28
Identity = 72/180 (40.00%), Postives = 103/180 (57.22%), Query Frame = 1
Query:  163 GDARAVQSFFCRLQLTDPNFFNVMDLNEKGCLINLFWTDTRSRVAYRYFGDVVLIDTTCLIDRYDVPLLSFFGVNHYGQSPLLGCGLLASESIESYT*VVYGASYMYVRALSPNKSSLTNVQSLQIAVGEAFPT---NLSMLFLRHASC-TKFH*NSKDFFEY---*DIYRCLKYNHFIT 681
            G  RA+Q FF ++QL+ PNF  +MDL + G L N+FW D R+R AY +FGDV+L DTTCL + Y++PL++F G+NH+G + LLGCGLLA +S E+Y   ++ A    +    P        ++++ AV E FP     LS+  + H  C +       D F       +Y CLK   F T
Sbjct:  241 GGFRALQDFFFQIQLSSPNFLYLMDLADDGSLRNVFWIDARARAAYSHFGDVLLFDTTCLSNAYELPLVAFVGINHHGDTILLGCGLLADQSFETYV-WLFRAWLTCMLGRPPQIFITEQCKAMRTAVSEVFPRAHHRLSLTHVLHNICQSVVQLQDSDLFPMALNRVVYGCLKVEEFET 419          
BLAST of EY665808 vs. ExPASy Swiss-Prot
Match: FRS3_ARATH (Protein FAR1-RELATED SEQUENCE 3 OS=Arabidopsis thaliana GN=FRS3 PE=2 SV=2)

HSP 1 Score: 98.2117 bits (243), Expect = 6.471e-20
Identity = 54/147 (36.73%), Postives = 83/147 (56.46%), Query Frame = 1
Query:  124 NIVNTSNHLNLIPGDARAVQSFFCRLQLTDPNFFNVMDLNEKGCLINLFWTDTRSRVAYRYFGDVVLIDTTCLIDRYDVPLLSFFGVNHYGQSPLLGCGLLASESIESYT*VVYGASYMYVRALSPNKSSLTNV-QSLQIAVGEAFP 561
            N    +N    I  DA  +  +F R+Q  +P FF  + L+E   + N+FW D+RSRVAY +FGD V +DT    +++ VP   F GVNH+GQ+ L GC L+  ES  S+  +    +++      P  S +T+  +++QIA G+ FP
Sbjct:  182 NASMATNTKRTIGRDAHNLLEYFKRMQAENPGFFYAVQLDEDNQMSNVFWADSRSRVAYTHFGDTVTLDTRYRCNQFRVPFAPFTGVNHHGQAILFGCALILDESDTSF--IWLFKTFLTAMRDQPPVSLVTDQDRAIQIAAGQVFP 326          
BLAST of EY665808 vs. ExPASy Swiss-Prot
Match: FAR1_ARATH (Protein FAR-RED IMPAIRED RESPONSE 1 OS=Arabidopsis thaliana GN=FAR1 PE=1 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.551e-18
Identity = 57/157 (36.31%), Postives = 82/157 (52.23%), Query Frame = 1
Query:  130 VNTSNHLNLIPGDARAVQSFFCRLQLTDPNFFNVMDLNEKGCLINLFWTDTRSRVAYRYFGDVVLIDTTCLIDRYDVPLLSFFGVNHYGQSPLLGCGLLASESIESYT*VVYGASYMYVRAL---SPNKSSLTNVQSLQIAVGEAFPTNLSMLFLRH 591
            V+   +L L  GD++ +  +F R++  +P FF  +DLNE   L NLFW D +SR  Y  F DVV  DTT +     +PL  F GVNH+ Q  LLGC L+A ES+E++  ++      ++RA+   +P        + L  AV E  P       L H
Sbjct:  213 VDKGRYLALEEGDSQVLLEYFKRIKKENPKFFYAIDLNEDQRLRNLFWADAKSRDDYLSFNDVVSFDTTYVKFNDKLPLALFIGVNHHSQPMLLGCALVADESMETFVWLI----KTWLRAMGGRAPKVILTDQDKFLMSAVSELLPNTRHCFALWH 365          
BLAST of EY665808 vs. ExPASy Swiss-Prot
Match: FRS4_ARATH (Protein FAR1-RELATED SEQUENCE 4 OS=Arabidopsis thaliana GN=FRS4 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.302e-17
Identity = 45/113 (39.82%), Postives = 64/113 (56.64%), Query Frame = 1
Query:  112 GAFGNIVNTSNHLNLIPGDARAVQSFFCRLQLTDPNFFNVMDLNEKGCLINLFWTDTRSRVAYRYFGDVVLIDTTCLIDRYDVPLLSFFGVNHYGQSPLLGCGLLASESIESY 450
            G   N  +    L L  GDA  +  F  R+Q  +P FF  +D +E   L N+FW D +    Y+ F DVV  +T+  + +Y VPL+ F GVNH+ Q  LLGCGLLA +++ +Y
Sbjct:  144 GYMRNQHDKGRRLVLDTGDAEILLEFLMRMQEENPKFFFAVDFSEDHLLRNVFWVDAKGIEDYKSFSDVVSFETSYFVSKYKVPLVLFVGVNHHVQPVLLGCGLLADDTVYTY 256          
BLAST of EY665808 vs. ExPASy Swiss-Prot
Match: FHY3_ARATH (Protein FAR-RED ELONGATED HYPOCOTYL 3 OS=Arabidopsis thaliana GN=FHY3 PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.154e-15
Identity = 52/151 (34.44%), Postives = 82/151 (54.30%), Query Frame = 1
Query:  148 LNLIPGDARAVQSFFCRLQLTDPNFFNVMDLNEKGCLINLFWTDTRSRVAYRYFGDVVLIDTTCLIDRYDVPLLSFFGVNHYGQSPLLGCGLLASESIESYT*VVYGASYMYVRALSPN--KSSLTNVQ-SLQIAVGEAFPTNLSMLFLRH 591
            L++  GD + +  F  R+Q  + NFF  +DL +   + N+FW D +SR  Y  F DVV +DTT + ++Y +PL  F GVN + Q  +LGC L++ ES  +Y+ ++      ++RA+     K  +T +   +   V E FP     LFL H
Sbjct:  228 LSVETGDFKILLDFLSRMQSLNSNFFYAVDLGDDQRVKNVFWVDAKSRHNYGSFCDVVSLDTTYVRNKYKMPLAIFVGVNQHYQYMVLGCALISDESAATYSWLM----ETWLRAIGGQAPKVLITELDVVMNSIVPEIFPNTRHCLFLWH 374          
BLAST of EY665808 vs. ExPASy Swiss-Prot
Match: FRS7_ARATH (Protein FAR1-RELATED SEQUENCE 7 OS=Arabidopsis thaliana GN=FRS7 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.633e-13
Identity = 47/128 (36.72%), Postives = 70/128 (54.69%), Query Frame = 1
Query:  187 FFCRLQLTDPNFFNVMDLNEKGCLINLFWTDTRSRVAYRYFGDVVLIDTTCLIDRYDVPLLSFFGVNHYGQSPLLGCGLLASESIESYT*VVYGASYMYVRALSPNK-SSLTNVQSLQI--AVGEAFP 561
            +F   Q  D  FF  ++L+  G  +++FW D+RSR A   FGD V+ DT+     Y VP  +F G NH+ Q  LLG  L+A ES E+++ +       ++RA+S  +  S+   Q L I  AV + FP
Sbjct:  332 YFQSKQAEDMGFFYAIELDSNGSCMSIFWADSRSRFACSQFGDAVVFDTSYRKGDYSVPFATFIGFNHHRQPVLLGGALVADESKEAFSWLF----QTWLRAMSGRRPRSMVADQDLPIQQAVAQVFP 455          
BLAST of EY665808 vs. ExPASy Swiss-Prot
Match: FRS5_ARATH (Protein FAR1-RELATED SEQUENCE 5 OS=Arabidopsis thaliana GN=FRS5 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.229e-12
Identity = 34/104 (32.69%), Postives = 58/104 (55.77%), Query Frame = 1
Query:  139 SNHLNLIPGDARAVQSFFCRLQLTDPNFFNVMDLNEKGCLINLFWTDTRSRVAYRYFGDVVLIDTTCLIDRYDVPLLSFFGVNHYGQSPLLGCGLLASESIESY 450
            +N    I G+ + +  +  ++   +PNFF  +  +E   + N+FW D ++ + + +FGD V  DTT   +RY +P   F GVNH+GQ  L GC  + +E+  S+
Sbjct:  240 NNRQKSIEGEIQLLLDYLRQMNADNPNFFYSVQGSEDQSVGNVFWADPKAIMDFTHFGDTVTFDTTYRSNRYRLPFAPFTGVNHHGQPILFGCAFIINETEASF 343          
BLAST of EY665808 vs. ExPASy Swiss-Prot
Match: FRS9_ARATH (Protein FAR1-RELATED SEQUENCE 9 OS=Arabidopsis thaliana GN=FRS9 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.491e-11
Identity = 43/128 (33.59%), Postives = 67/128 (52.34%), Query Frame = 1
Query:  178 VQSFFCRLQLTDPNFFNVMDLNEKGCLINLFWTDTRSRVAYRYFGDVVLIDTTCLID-RYDVPLLSFFGVNHYGQSPLLGCGLLASESIESYT*VVYGASYMYVRALSPNKSSLTNVQSLQIAVGEAF 558
            V ++  R QL +P F   ++ ++ G   N+FW D   R+ Y YFGD ++ DTT     RY VP  +F G NH+GQ  L GC L+ +ES  S+   ++      + A  P   ++   + +Q+AV   F
Sbjct:    7 VLNYLKRRQLENPGFLYAIE-DDCG---NVFWADPTCRLNYTYFGDTLVFDTTYRRGKRYQVPFAAFTGFNHHGQPVLFGCALILNESESSFA-WLFQTWLQAMSAPPPPSITVEPDRLIQVAVSRVF 129          
BLAST of EY665808 vs. ExPASy Swiss-Prot
Match: FRS12_ARATH (Protein FAR1-RELATED SEQUENCE 12 OS=Arabidopsis thaliana GN=FRS12 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.491e-11
Identity = 34/89 (38.20%), Postives = 51/89 (57.30%), Query Frame = 1
Query:  187 FFCRLQLTDPNFFNVMDLN-EKGCLINLFWTDTRSRVAYRYFGDVVLIDTTCLIDRYDVPLLSFFGVNHYGQSPLLGCGLLASESIESY 450
            +F   Q  D  FF  ++L+   G  +++FW D+R+R A   FGD V+ DT+     Y VP  +  G NH+ Q  LLGC ++A ES E++
Sbjct:  355 YFQSRQTEDMGFFYAVELDVNNGSCMSIFWADSRARFACSQFGDSVVFDTSYRKGSYSVPFATIIGFNHHRQPVLLGCAMVADESKEAF 443          
The following BLAST results are available for this feature:
BLAST of EY665808 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
FRS6_ARATH4.044e-3038.92Protein FAR1-RELATED SEQUENCE 6 OS=Arabidopsis tha... [more]
FRS8_ARATH1.301e-2840.00Protein FAR1-RELATED SEQUENCE 8 OS=Arabidopsis tha... [more]
FRS3_ARATH6.471e-2036.73Protein FAR1-RELATED SEQUENCE 3 OS=Arabidopsis tha... [more]
FAR1_ARATH3.551e-1836.31Protein FAR-RED IMPAIRED RESPONSE 1 OS=Arabidopsis... [more]
FRS4_ARATH2.302e-1739.82Protein FAR1-RELATED SEQUENCE 4 OS=Arabidopsis tha... [more]
FHY3_ARATH2.154e-1534.44Protein FAR-RED ELONGATED HYPOCOTYL 3 OS=Arabidops... [more]
FRS7_ARATH2.633e-1336.72Protein FAR1-RELATED SEQUENCE 7 OS=Arabidopsis tha... [more]
FRS5_ARATH2.229e-1232.69Protein FAR1-RELATED SEQUENCE 5 OS=Arabidopsis tha... [more]
FRS9_ARATH5.491e-1133.59Protein FAR1-RELATED SEQUENCE 9 OS=Arabidopsis tha... [more]
FRS12_ARATH5.491e-1138.20Protein FAR1-RELATED SEQUENCE 12 OS=Arabidopsis th... [more]
back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-102-095-G09-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665808 ID=EY665808; Name=EY665808; organism=Citrus sinensis; type=EST; length=878bp
GGTGAACCGCAGCACGGTCCGCATTCCTCGTTCAAACCCGCGTCCGATAA
ATTTTTTTTTTTTCCCCTTTTTATCATTGATGCCTATGGAAATGGTAATG
TAGATGCTTATGGAGCATTTGGAAATATCGTTAATACCTCAAATCATTTG
AACCTTATTCCAGGTGATGCACGAGCTGTCCAAAGTTTCTTTTGTCGCCT
GCAGTTGACAGATCCAAACTTTTTTAATGTAATGGATCTAAATGAAAAGG
GATGCTTGATAAACCTGTTCTGGACTGATACCAGATCAAGAGTTGCATAT
AGGTACTTTGGTGATGTAGTCTTAATTGATACTACTTGCTTGATTGACAG
ATATGATGTACCACTGCTTTCATTCTTTGGGGTGAATCATTATGGACAAT
CACCGTTGTTGGGTTGTGGTTTACTTGCCAGTGAGAGCATAGAATCATAT
ACATGAGTAGTTTATGGCGCGTCTTACATGTATGTTAGGGCTCTTTCCCC
AAACAAATCATCACTGACCAATGTACAATCCTTGCAAATTGCTGTTGGCG
AAGCTTTCCCCACAAACTTATCCATGCTTTTCCTTCGTCATGCTTCATGC
ACCAAATTCCATTGAAACTCCAAGGATTTCTTTGAATACTGAGATATTTA
CCGCTGCCTTAAATATAACCACTTTATCACTCTCCTCAACGCCTGAAAAA
ATTTGAAGACGCCTTGGAAAAACTAGTAACCACCGTTTTGAAATAATGGG
ACATTGGTCGGTATTTACCTTTCAAAAACAAAAAATTAAAAAAGGTGGGT
TTCTAATTAAATTCAAAAGAATCATATTTTTTTTCACAAAGGGTCTTCTT
TTCACTCATAATTCAACCCTCTTTCCAA
back to top